RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 ACER1Q8TDN7 264 aa21.88■■□□□ 1.09
TSPAN4-204ENST00000397404 AIFM3Q96NN9 605 aa21.88■■□□□ 1.09
TSPAN4-204ENST00000397404 ZMYND12Q9H0C1 365 aa21.88■■□□□ 1.09
TSPAN4-204ENST00000397404 C6orf50Q9HD87 102 aa21.88■■□□□ 1.09
TSPAN4-204ENST00000397404 RAD21O60216 631 aa21.87■■□□□ 1.09
TSPAN4-204ENST00000397404 TRAPPC10P48553 1259 aa21.87■■□□□ 1.09
TSPAN4-204ENST00000397404 GUCY1B3Q02153 619 aa21.87■■□□□ 1.09
TSPAN4-204ENST00000397404 MYSM1Q5VVJ2 828 aa21.87■■□□□ 1.09
TSPAN4-204ENST00000397404 VPS54Q9P1Q0 977 aa21.87■■□□□ 1.09
TSPAN4-204ENST00000397404 PCDHA4Q9UN74 947 aa21.87■■□□□ 1.09
TSPAN4-204ENST00000397404 CLEC11AQ9Y240 323 aa21.87■■□□□ 1.09
TSPAN4-204ENST00000397404 TMEM232C9JQI7 657 aa21.86■■□□□ 1.09
TSPAN4-204ENST00000397404 STXBP3O00186 592 aa21.86■■□□□ 1.09
TSPAN4-204ENST00000397404 PPATQ06203 517 aa21.86■■□□□ 1.09
TSPAN4-204ENST00000397404 IKQ13123 557 aaPredicted RBP21.86■■□□□ 1.09
TSPAN4-204ENST00000397404 WWC2Q6AWC2 1192 aa21.86■■□□□ 1.09
TSPAN4-204ENST00000397404 HEATR3Q7Z4Q2 680 aa21.86■■□□□ 1.09
TSPAN4-204ENST00000397404 PIGSQ96S52 555 aa21.86■■□□□ 1.09
TSPAN4-204ENST00000397404 UBA5Q9GZZ9 404 aa21.86■■□□□ 1.09
TSPAN4-204ENST00000397404 POLR3EQ9NVU0 708 aa21.86■■□□□ 1.09
TSPAN4-204ENST00000397404 ISY1Q9ULR0 285 aaKnown RBP21.86■■□□□ 1.09
TSPAN4-204ENST00000397404 MORC2Q9Y6X9 1032 aaPredicted RBP21.86■■□□□ 1.09
TSPAN4-204ENST00000397404 BMP15O95972 392 aa21.85■■□□□ 1.09
TSPAN4-204ENST00000397404 NAPAP54920 295 aa21.85■■□□□ 1.09
TSPAN4-204ENST00000397404 DNM1Q05193 864 aaKnown RBP21.85■■□□□ 1.09
TSPAN4-204ENST00000397404 SH3D19Q5HYK7 790 aa21.85■■□□□ 1.09
TSPAN4-204ENST00000397404 PRAMEF18Q5VWM3 479 aa21.85■■□□□ 1.09
TSPAN4-204ENST00000397404 ZKSCAN4Q969J2 545 aaPredicted RBP21.85■■□□□ 1.09
TSPAN4-204ENST00000397404 NOL7Q9UMY1 257 aaKnown RBP21.85■■□□□ 1.09
TSPAN4-204ENST00000397404 PAPPA2Q9BXP8 1791 aa21.85■■□□□ 1.09
TSPAN4-204ENST00000397404 MYH15Q9Y2K3 1946 aa21.85■■□□□ 1.09
TSPAN4-204ENST00000397404 YEATS4O95619 227 aa21.84■■□□□ 1.09
TSPAN4-204ENST00000397404 MBD3O95983 291 aa21.84■■□□□ 1.09
TSPAN4-204ENST00000397404 SLC35G1Q2M3R5 365 aa21.84■■□□□ 1.09
TSPAN4-204ENST00000397404 ERO1BQ86YB8 467 aa21.84■■□□□ 1.09
TSPAN4-204ENST00000397404 HOMER1Q86YM7 354 aa21.84■■□□□ 1.09
TSPAN4-204ENST00000397404 PRPF38AQ8NAV1 312 aaKnown RBP21.84■■□□□ 1.09
TSPAN4-204ENST00000397404 AMNQ9BXJ7 453 aa21.84■■□□□ 1.09
TSPAN4-204ENST00000397404 RTEL1Q9NZ71 1219 aa21.84■■□□□ 1.09
TSPAN4-204ENST00000397404 CEP131Q9UPN4 1083 aa21.84■■□□□ 1.09
TSPAN4-204ENST00000397404 ZHX2Q9Y6X8 837 aa21.84■■□□□ 1.09
TSPAN4-204ENST00000397404 BAZ2BQ9UIF8 2168 aaKnown RBP21.84■■□□□ 1.09
TSPAN4-204ENST00000397404 CXCL11O14625 94 aa21.83■■□□□ 1.09
TSPAN4-204ENST00000397404 FOSBP53539 338 aa21.83■■□□□ 1.09
TSPAN4-204ENST00000397404 OTUD7BQ6GQQ9 843 aa21.83■■□□□ 1.09
TSPAN4-204ENST00000397404 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.83■■□□□ 1.09
TSPAN4-204ENST00000397404 BLIDQ8IZY5 108 aa21.83■■□□□ 1.09
TSPAN4-204ENST00000397404 JMYQ8N9B5 988 aa21.83■■□□□ 1.09
TSPAN4-204ENST00000397404 KCNG4Q8TDN1 519 aa21.83■■□□□ 1.09
TSPAN4-204ENST00000397404 RRAGCQ9HB90 399 aa21.83■■□□□ 1.09
TSPAN4-204ENST00000397404 VAT1LQ9HCJ6 419 aa21.83■■□□□ 1.09
TSPAN4-204ENST00000397404 TMOD4Q9NZQ9 345 aa21.83■■□□□ 1.09
TSPAN4-204ENST00000397404 KCNJ14Q9UNX9 436 aa21.83■■□□□ 1.09
TSPAN4-204ENST00000397404 AFG3L2Q9Y4W6 797 aa21.83■■□□□ 1.09
TSPAN4-204ENST00000397404 BTBD18B2RXH4 712 aa21.83■■□□□ 1.08
TSPAN4-204ENST00000397404 DTNBO60941 627 aa21.83■■□□□ 1.08
TSPAN4-204ENST00000397404 MRPL12P52815 198 aaKnown RBP21.83■■□□□ 1.08
TSPAN4-204ENST00000397404 SPP2Q13103 211 aa21.83■■□□□ 1.08
TSPAN4-204ENST00000397404 VGLL4Q14135 290 aa21.83■■□□□ 1.08
TSPAN4-204ENST00000397404 CDC37Q16543 378 aaPredicted RBP21.83■■□□□ 1.08
TSPAN4-204ENST00000397404 FAM83BQ5T0W9 1011 aa21.83■■□□□ 1.08
TSPAN4-204ENST00000397404 TTBK2Q6IQ55 1244 aa21.83■■□□□ 1.08
TSPAN4-204ENST00000397404 SPATA32Q96LK8 384 aa21.83■■□□□ 1.08
TSPAN4-204ENST00000397404 MAF1Q9H063 256 aa21.83■■□□□ 1.08
TSPAN4-204ENST00000397404 SNCAIPQ9Y6H5 919 aa21.83■■□□□ 1.08
TSPAN4-204ENST00000397404 MYPNQ86TC9 1320 aa21.83■■□□□ 1.08
TSPAN4-204ENST00000397404 NASPP49321 788 aaPredicted RBP21.82■■□□□ 1.08
TSPAN4-204ENST00000397404 UBE2HP62256 183 aa21.82■■□□□ 1.08
TSPAN4-204ENST00000397404 ORC2Q13416 577 aaPredicted RBP21.82■■□□□ 1.08
TSPAN4-204ENST00000397404 MTMR2Q13614 643 aa21.82■■□□□ 1.08
TSPAN4-204ENST00000397404 SPICE1Q8N0Z3 855 aa21.82■■□□□ 1.08
TSPAN4-204ENST00000397404 GLIS2Q9BZE0 524 aaPredicted RBP21.82■■□□□ 1.08
TSPAN4-204ENST00000397404 RANBP17Q9H2T7 1088 aaKnown RBP21.82■■□□□ 1.08
TSPAN4-204ENST00000397404 RCOR1Q9UKL0 485 aa21.82■■□□□ 1.08
TSPAN4-204ENST00000397404 PRR12Q9ULL5 1215 aa21.82■■□□□ 1.08
TSPAN4-204ENST00000397404 hCG_1642624A0A1W2PR95 340 aa21.81■■□□□ 1.08
TSPAN4-204ENST00000397404 SMCO2A6NFE2 343 aa21.81■■□□□ 1.08
TSPAN4-204ENST00000397404 SPDYE5A6NIY4 337 aa21.81■■□□□ 1.08
TSPAN4-204ENST00000397404 UBE2Q2LH0YL09 131 aa21.81■■□□□ 1.08
TSPAN4-204ENST00000397404 TTLL12Q14166 644 aaPredicted RBP21.81■■□□□ 1.08
TSPAN4-204ENST00000397404 NPY5RQ15761 445 aa21.81■■□□□ 1.08
TSPAN4-204ENST00000397404 QRICH1Q2TAL8 776 aa21.81■■□□□ 1.08
TSPAN4-204ENST00000397404 RASGRP2Q7LDG7 609 aa21.81■■□□□ 1.08
TSPAN4-204ENST00000397404 KRT25Q7Z3Z0 450 aa21.81■■□□□ 1.08
TSPAN4-204ENST00000397404 FBXO11Q86XK2 927 aa21.81■■□□□ 1.08
TSPAN4-204ENST00000397404 SAMD3Q8N6K7 520 aa21.81■■□□□ 1.08
TSPAN4-204ENST00000397404 CUL5Q93034 780 aa21.81■■□□□ 1.08
TSPAN4-204ENST00000397404 SLF1Q9BQI6 1058 aa21.81■■□□□ 1.08
TSPAN4-204ENST00000397404 GJB4Q9NTQ9 266 aa21.81■■□□□ 1.08
TSPAN4-204ENST00000397404 LMBRD1Q9NUN5 540 aa21.81■■□□□ 1.08
TSPAN4-204ENST00000397404 PHIPQ8WWQ0 1821 aa21.81■■□□□ 1.08
TSPAN4-204ENST00000397404 KIF28PB7ZC32 967 aa21.8■■□□□ 1.08
TSPAN4-204ENST00000397404 VCAM1P19320 739 aa21.8■■□□□ 1.08
TSPAN4-204ENST00000397404 SLC16A2P36021 539 aa21.8■■□□□ 1.08
TSPAN4-204ENST00000397404 ADCY7P51828 1080 aa21.8■■□□□ 1.08
TSPAN4-204ENST00000397404 PPIL2Q13356 520 aa21.8■■□□□ 1.08
TSPAN4-204ENST00000397404 LDLRAD1Q5T700 205 aa21.8■■□□□ 1.08
TSPAN4-204ENST00000397404 PROCA1Q8NCQ7 364 aaPredicted RBP21.8■■□□□ 1.08
TSPAN4-204ENST00000397404 GPKOWQ92917 476 aaPredicted RBP eCLIP21.8■■□□□ 1.08
TSPAN4-204ENST00000397404 RIC8AQ9NPQ8 531 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms