RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 DHX16O60231 1041 aaKnown RBP17.21■□□□□ 0.35
CAPN3-207ENST00000397200 FDPSP14324 419 aaKnown RBP17.21■□□□□ 0.35
CAPN3-207ENST00000397200 HMGCS2P54868 508 aa17.21■□□□□ 0.35
CAPN3-207ENST00000397200 ASPRV1Q53RT3 343 aa17.21■□□□□ 0.35
CAPN3-207ENST00000397200 TMOD4Q9NZQ9 345 aa17.21■□□□□ 0.35
CAPN3-207ENST00000397200 MAD2L2Q9UI95 211 aa17.21■□□□□ 0.35
CAPN3-207ENST00000397200 KCNH4Q9UQ05 1017 aa17.21■□□□□ 0.35
CAPN3-207ENST00000397200 H3BQV1 296 aa17.21■□□□□ 0.35
CAPN3-207ENST00000397200 CPLX1O14810 134 aa17.21■□□□□ 0.35
CAPN3-207ENST00000397200 LETM1O95202 739 aaPredicted RBP17.21■□□□□ 0.35
CAPN3-207ENST00000397200 GOLGA8HP0CJ92 632 aa17.21■□□□□ 0.35
CAPN3-207ENST00000397200 BMP3P12645 472 aa17.21■□□□□ 0.35
CAPN3-207ENST00000397200 CDC27P30260 824 aa17.21■□□□□ 0.35
CAPN3-207ENST00000397200 GJA5P36382 358 aa17.21■□□□□ 0.35
CAPN3-207ENST00000397200 GNAQP50148 359 aa17.21■□□□□ 0.35
CAPN3-207ENST00000397200 ZNF157P51786 506 aaPredicted RBP17.21■□□□□ 0.35
CAPN3-207ENST00000397200 ZNF543Q08ER8 600 aa17.21■□□□□ 0.35
CAPN3-207ENST00000397200 SH3D19Q5HYK7 790 aa17.21■□□□□ 0.35
CAPN3-207ENST00000397200 KIAA1755Q5JYT7 1200 aa17.21■□□□□ 0.35
CAPN3-207ENST00000397200 GPATCH4Q5T3I0 446 aaKnown RBP17.21■□□□□ 0.35
CAPN3-207ENST00000397200 IFFO2Q5TF58 517 aa17.21■□□□□ 0.35
CAPN3-207ENST00000397200 FRMPD2Q68DX3 1309 aaPredicted RBP17.21■□□□□ 0.35
CAPN3-207ENST00000397200 LEO1Q8WVC0 666 aaPredicted RBP17.21■□□□□ 0.35
CAPN3-207ENST00000397200 PPP1R9BQ96SB3 815 aa17.21■□□□□ 0.35
CAPN3-207ENST00000397200 EMILIN3Q9NT22 766 aa17.21■□□□□ 0.35
CAPN3-207ENST00000397200 LOC285556D6RIA3 1793 aa17.2■□□□□ 0.34
CAPN3-207ENST00000397200 PALM3A6NDB9 673 aaPredicted RBP17.2■□□□□ 0.34
CAPN3-207ENST00000397200 ADD1P35611 737 aaKnown RBP17.2■□□□□ 0.34
CAPN3-207ENST00000397200 APLP1P51693 650 aa17.2■□□□□ 0.34
CAPN3-207ENST00000397200 DGKZQ13574 1117 aa17.2■□□□□ 0.34
CAPN3-207ENST00000397200 ATL3Q6DD88 541 aa17.2■□□□□ 0.34
CAPN3-207ENST00000397200 RGMBQ6NW40 437 aa17.2■□□□□ 0.34
CAPN3-207ENST00000397200 FAM173BQ6P4H8 233 aa17.2■□□□□ 0.34
CAPN3-207ENST00000397200 CPLX2Q6PUV4 134 aaKnown RBP17.2■□□□□ 0.34
CAPN3-207ENST00000397200 KCTD1Q719H9 257 aa17.2■□□□□ 0.34
CAPN3-207ENST00000397200 C12orf42Q96LP6 360 aa17.2■□□□□ 0.34
CAPN3-207ENST00000397200 NUP88Q99567 741 aaPredicted RBP17.2■□□□□ 0.34
CAPN3-207ENST00000397200 FAM217BQ9NTX9 383 aaPredicted RBP17.2■□□□□ 0.34
CAPN3-207ENST00000397200 A0A0G2JLL6 359 aaPredicted RBP17.19■□□□□ 0.34
CAPN3-207ENST00000397200 WDR46O15213 610 aaKnown RBP17.19■□□□□ 0.34
CAPN3-207ENST00000397200 ZBTB48P10074 688 aaPredicted RBP17.19■□□□□ 0.34
CAPN3-207ENST00000397200 VCAM1P19320 739 aa17.19■□□□□ 0.34
CAPN3-207ENST00000397200 SNAPC2Q13487 334 aa17.19■□□□□ 0.34
CAPN3-207ENST00000397200 FAM83BQ5T0W9 1011 aa17.19■□□□□ 0.34
CAPN3-207ENST00000397200 SPRYD7Q5W111 196 aa17.19■□□□□ 0.34
CAPN3-207ENST00000397200 TMTC3Q6ZXV5 915 aa17.19■□□□□ 0.34
CAPN3-207ENST00000397200 PRRT2Q7Z6L0 340 aaPredicted RBP17.19■□□□□ 0.34
CAPN3-207ENST00000397200 STAG2Q8N3U4 1231 aa17.19■□□□□ 0.34
CAPN3-207ENST00000397200 GPCPD1Q9NPB8 672 aa17.19■□□□□ 0.34
CAPN3-207ENST00000397200 KLRF2D3W0D1 207 aa17.18■□□□□ 0.34
CAPN3-207ENST00000397200 CDKL5O76039 1030 aa17.18■□□□□ 0.34
CAPN3-207ENST00000397200 PLEKHA8P1O95397 391 aa17.18■□□□□ 0.34
CAPN3-207ENST00000397200 CCDC173Q0VFZ6 552 aa17.18■□□□□ 0.34
CAPN3-207ENST00000397200 MKRN3Q13064 507 aaKnown RBP17.18■□□□□ 0.34
CAPN3-207ENST00000397200 RASAL3Q86YV0 1011 aa17.18■□□□□ 0.34
CAPN3-207ENST00000397200 HHIPL1Q96JK4 782 aa17.18■□□□□ 0.34
CAPN3-207ENST00000397200 LZTS2Q9BRK4 669 aa17.18■□□□□ 0.34
CAPN3-207ENST00000397200 CREBZFQ9NS37 354 aa17.18■□□□□ 0.34
CAPN3-207ENST00000397200 TMEM232C9JQI7 657 aa17.18■□□□□ 0.34
CAPN3-207ENST00000397200 GTF2A2P52657 109 aa17.18■□□□□ 0.34
CAPN3-207ENST00000397200 IKQ13123 557 aaPredicted RBP17.18■□□□□ 0.34
CAPN3-207ENST00000397200 GADL1Q6ZQY3 521 aa17.18■□□□□ 0.34
CAPN3-207ENST00000397200 FASTKD5Q7L8L6 764 aaKnown RBP17.18■□□□□ 0.34
CAPN3-207ENST00000397200 PROCA1Q8NCQ7 364 aaPredicted RBP17.18■□□□□ 0.34
CAPN3-207ENST00000397200 SPATA32Q96LK8 384 aa17.18■□□□□ 0.34
CAPN3-207ENST00000397200 TSPY26PQ9H489 355 aa17.18■□□□□ 0.34
CAPN3-207ENST00000397200 MYH6P13533 1939 aa17.17■□□□□ 0.34
CAPN3-207ENST00000397200 TTBK2Q6IQ55 1244 aa17.17■□□□□ 0.34
CAPN3-207ENST00000397200 CMTR1Q8N1G2 835 aaKnown RBP17.17■□□□□ 0.34
CAPN3-207ENST00000397200 CCDC82Q8N4S0 544 aa17.17■□□□□ 0.34
CAPN3-207ENST00000397200 SRBD1Q8N5C6 995 aaKnown RBP17.17■□□□□ 0.34
CAPN3-207ENST00000397200 FUCA2Q9BTY2 467 aa17.17■□□□□ 0.34
CAPN3-207ENST00000397200 TANGO6Q9C0B7 1094 aa17.17■□□□□ 0.34
CAPN3-207ENST00000397200 RPAP3Q9H6T3 665 aaPredicted RBP17.17■□□□□ 0.34
CAPN3-207ENST00000397200 CFAP45Q9UL16 551 aa17.17■□□□□ 0.34
CAPN3-207ENST00000397200 SLC10A3P09131 477 aa17.16■□□□□ 0.34
CAPN3-207ENST00000397200 CETPP11597 493 aa17.16■□□□□ 0.34
CAPN3-207ENST00000397200 IFNAR1P17181 557 aa17.16■□□□□ 0.34
CAPN3-207ENST00000397200 STAT2P52630 851 aa17.16■□□□□ 0.34
CAPN3-207ENST00000397200 NTRK3Q16288 839 aa17.16■□□□□ 0.34
CAPN3-207ENST00000397200 PAXIP1Q6ZW49 1069 aaPredicted RBP17.16■□□□□ 0.34
CAPN3-207ENST00000397200 CCDC102AQ96A19 550 aa17.16■□□□□ 0.34
CAPN3-207ENST00000397200 UBA5Q9GZZ9 404 aa17.16■□□□□ 0.34
CAPN3-207ENST00000397200 FEM1BQ9UK73 627 aa17.16■□□□□ 0.34
CAPN3-207ENST00000397200 STK36Q9NRP7 1315 aa17.15■□□□□ 0.34
CAPN3-207ENST00000397200 SMARCA1P28370 1054 aa17.15■□□□□ 0.34
CAPN3-207ENST00000397200 SLC16A2P36021 539 aa17.15■□□□□ 0.34
CAPN3-207ENST00000397200 NBPF11Q86T75 865 aa17.15■□□□□ 0.34
CAPN3-207ENST00000397200 FAM160B2Q86V87 743 aa17.15■□□□□ 0.34
CAPN3-207ENST00000397200 CHURC1Q8WUH1 139 aa17.15■□□□□ 0.34
CAPN3-207ENST00000397200 PHKBQ93100 1093 aa17.15■□□□□ 0.34
CAPN3-207ENST00000397200 PDLIM2Q96JY6 352 aa17.15■□□□□ 0.34
CAPN3-207ENST00000397200 SPZ1Q9BXG8 430 aa17.15■□□□□ 0.34
CAPN3-207ENST00000397200 CPVLQ9H3G5 476 aa17.15■□□□□ 0.34
CAPN3-207ENST00000397200 ORC3Q9UBD5 711 aaPredicted RBP17.15■□□□□ 0.34
CAPN3-207ENST00000397200 RCOR1Q9UKL0 485 aa17.15■□□□□ 0.34
CAPN3-207ENST00000397200 BAZ2BQ9UIF8 2168 aaKnown RBP17.15■□□□□ 0.34
CAPN3-207ENST00000397200 CNTNAP5Q8WYK1 1306 aa17.15■□□□□ 0.34
CAPN3-207ENST00000397200 USP17L15C9J2P7 530 aa17.14■□□□□ 0.33
CAPN3-207ENST00000397200 USP17L13C9JLJ4 530 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms