RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 CPP00450 1065 aa10.28□□□□□ -0.76
CAPN3-206ENST00000397163 ARID4AP29374 1257 aaPredicted RBP10.28□□□□□ -0.76
CAPN3-206ENST00000397163 GGCXP38435 758 aa10.28□□□□□ -0.76
CAPN3-206ENST00000397163 PTGDRQ13258 359 aa10.28□□□□□ -0.76
CAPN3-206ENST00000397163 FKBP15Q5T1M5 1219 aa10.28□□□□□ -0.76
CAPN3-206ENST00000397163 RPAINQ86UA6 219 aa10.28□□□□□ -0.76
CAPN3-206ENST00000397163 KIRREL3Q8IZU9 778 aa10.28□□□□□ -0.76
CAPN3-206ENST00000397163 LCORLQ8N3X6 602 aa10.28□□□□□ -0.76
CAPN3-206ENST00000397163 RNF41Q9H4P4 317 aaPredicted RBP10.28□□□□□ -0.76
CAPN3-206ENST00000397163 KAT14Q9H8E8 782 aa10.28□□□□□ -0.76
CAPN3-206ENST00000397163 GNL3LQ9NVN8 582 aaKnown RBP10.28□□□□□ -0.76
CAPN3-206ENST00000397163 CAPN7Q9Y6W3 813 aa10.28□□□□□ -0.76
CAPN3-206ENST00000397163 V9GY48 417 aaPredicted RBP10.28□□□□□ -0.76
CAPN3-206ENST00000397163 COL22A1Q8NFW1 1626 aaPredicted RBP10.28□□□□□ -0.76
CAPN3-206ENST00000397163 NID2Q14112 1375 aa10.28□□□□□ -0.76
CAPN3-206ENST00000397163 ERVV-2B6SEH9 535 aa10.28□□□□□ -0.76
CAPN3-206ENST00000397163 IPO7O95373 1038 aaKnown RBP10.28□□□□□ -0.76
CAPN3-206ENST00000397163 CTSWP56202 376 aa10.28□□□□□ -0.76
CAPN3-206ENST00000397163 GBP6Q6ZN66 633 aa10.28□□□□□ -0.76
CAPN3-206ENST00000397163 VGLL2Q8N8G2 317 aa10.28□□□□□ -0.76
CAPN3-206ENST00000397163 MIGA1Q8NAN2 632 aa10.28□□□□□ -0.76
CAPN3-206ENST00000397163 FAM76AQ8TAV0 307 aa10.28□□□□□ -0.76
CAPN3-206ENST00000397163 JAKMIP2Q96AA8 810 aa10.28□□□□□ -0.76
CAPN3-206ENST00000397163 SHISA4Q96DD7 197 aa10.28□□□□□ -0.76
CAPN3-206ENST00000397163 GTPBP6O43824 516 aaPredicted RBP10.27□□□□□ -0.77
CAPN3-206ENST00000397163 EIF5P55010 431 aaKnown RBP10.27□□□□□ -0.77
CAPN3-206ENST00000397163 GDAQ9Y2T3 454 aa10.27□□□□□ -0.77
CAPN3-206ENST00000397163 PHLPP1O60346 1717 aa10.27□□□□□ -0.77
CAPN3-206ENST00000397163 TNKSO95271 1327 aa10.27□□□□□ -0.77
CAPN3-206ENST00000397163 PCDH11XQ9BZA7 1347 aa10.27□□□□□ -0.77
CAPN3-206ENST00000397163 PCDH11YQ9BZA8 1340 aa10.27□□□□□ -0.77
CAPN3-206ENST00000397163 PARP1P09874 1014 aaKnown RBP10.27□□□□□ -0.77
CAPN3-206ENST00000397163 KRT83P78385 493 aa10.27□□□□□ -0.77
CAPN3-206ENST00000397163 PUM3Q15397 648 aaKnown RBP10.27□□□□□ -0.77
CAPN3-206ENST00000397163 EHBP1Q8NDI1 1231 aa10.27□□□□□ -0.77
CAPN3-206ENST00000397163 GIMAP7Q8NHV1 300 aa10.27□□□□□ -0.77
CAPN3-206ENST00000397163 LPIN2Q92539 896 aa10.27□□□□□ -0.77
CAPN3-206ENST00000397163 RPGRIP1Q96KN7 1286 aa10.27□□□□□ -0.77
CAPN3-206ENST00000397163 PHF20Q9BVI0 1012 aa10.27□□□□□ -0.77
CAPN3-206ENST00000397163 SELENOOQ9BVL4 669 aa10.27□□□□□ -0.77
CAPN3-206ENST00000397163 CENPHQ9H3R5 247 aa10.27□□□□□ -0.77
CAPN3-206ENST00000397163 RMND1Q9NWS8 449 aa10.27□□□□□ -0.77
CAPN3-206ENST00000397163 CDHR2Q9BYE9 1310 aa10.26□□□□□ -0.77
CAPN3-206ENST00000397163 TARSL2A2RTX5 802 aaKnown RBP10.26□□□□□ -0.77
CAPN3-206ENST00000397163 GOLGA6CA6NDK9 693 aa10.26□□□□□ -0.77
CAPN3-206ENST00000397163 SNAP23O00161 211 aa10.26□□□□□ -0.77
CAPN3-206ENST00000397163 IRS4O14654 1257 aaPredicted RBP10.26□□□□□ -0.77
CAPN3-206ENST00000397163 KRT86O43790 486 aa10.26□□□□□ -0.77
CAPN3-206ENST00000397163 GOLGA6DP0CG33 693 aa10.26□□□□□ -0.77
CAPN3-206ENST00000397163 HSPA1LP34931 641 aa10.26□□□□□ -0.77
CAPN3-206ENST00000397163 HERVK_113P62684 666 aa10.26□□□□□ -0.77
CAPN3-206ENST00000397163 RASGRF1Q13972 1273 aa10.26□□□□□ -0.77
CAPN3-206ENST00000397163 ZNF658Q5TYW1 1059 aaPredicted RBP10.26□□□□□ -0.77
CAPN3-206ENST00000397163 CCDC70Q6NSX1 233 aa10.26□□□□□ -0.77
CAPN3-206ENST00000397163 BCAS4Q8TDM0 211 aa10.26□□□□□ -0.77
CAPN3-206ENST00000397163 JADE2Q9NQC1 790 aa10.26□□□□□ -0.77
CAPN3-206ENST00000397163 GOLGA6AQ9NYA3 693 aa10.26□□□□□ -0.77
CAPN3-206ENST00000397163 TRIM49BA6NDI0 452 aa10.26□□□□□ -0.77
CAPN3-206ENST00000397163 RPN1P04843 607 aaKnown RBP10.26□□□□□ -0.77
CAPN3-206ENST00000397163 GNAT2P19087 354 aa10.26□□□□□ -0.77
CAPN3-206ENST00000397163 INPP5BP32019 993 aa10.26□□□□□ -0.77
CAPN3-206ENST00000397163 RCAN1P53805 252 aa10.26□□□□□ -0.77
CAPN3-206ENST00000397163 PKN1Q16512 942 aa10.26□□□□□ -0.77
CAPN3-206ENST00000397163 PAPD7Q5XG87 772 aaKnown RBP10.26□□□□□ -0.77
CAPN3-206ENST00000397163 MB21D1Q8N884 522 aa10.26□□□□□ -0.77
CAPN3-206ENST00000397163 ESR2Q92731 530 aa10.26□□□□□ -0.77
CAPN3-206ENST00000397163 TRMT112Q9UI30 125 aaKnown RBP10.26□□□□□ -0.77
CAPN3-206ENST00000397163 RTL9Q8NET4 1388 aa10.26□□□□□ -0.77
CAPN3-206ENST00000397163 ECM29Q5VYK3 1845 aa10.26□□□□□ -0.77
CAPN3-206ENST00000397163 GOLGA6BA6NDN3 693 aa10.26□□□□□ -0.77
CAPN3-206ENST00000397163 H7C1D1 291 aa10.26□□□□□ -0.77
CAPN3-206ENST00000397163 EBAG9O00559 213 aa10.26□□□□□ -0.77
CAPN3-206ENST00000397163 ZNF185O15231 689 aa10.26□□□□□ -0.77
CAPN3-206ENST00000397163 PLEKHA8P1O95397 391 aa10.26□□□□□ -0.77
CAPN3-206ENST00000397163 MYBL2P10244 700 aa10.26□□□□□ -0.77
CAPN3-206ENST00000397163 SLC5A1P13866 664 aa10.26□□□□□ -0.77
CAPN3-206ENST00000397163 MCM7P33993 719 aa10.26□□□□□ -0.77
CAPN3-206ENST00000397163 PRCPP42785 496 aa10.26□□□□□ -0.77
CAPN3-206ENST00000397163 PPARAQ07869 468 aa10.26□□□□□ -0.77
CAPN3-206ENST00000397163 HLFQ16534 295 aa10.26□□□□□ -0.77
CAPN3-206ENST00000397163 TOM1L2Q6ZVM7 507 aa10.26□□□□□ -0.77
CAPN3-206ENST00000397163 FAM107BQ9H098 131 aa10.26□□□□□ -0.77
CAPN3-206ENST00000397163 ZNHIT6Q9NWK9 470 aaKnown RBP10.26□□□□□ -0.77
CAPN3-206ENST00000397163 MAGEC2Q9UBF1 373 aaPredicted RBP10.26□□□□□ -0.77
CAPN3-206ENST00000397163 ABCA3Q99758 1704 aa10.25□□□□□ -0.77
CAPN3-206ENST00000397163 CCDC189A1A4V9 331 aa10.25□□□□□ -0.77
CAPN3-206ENST00000397163 IDEP14735 1019 aa10.25□□□□□ -0.77
CAPN3-206ENST00000397163 PAX7P23759 505 aa10.25□□□□□ -0.77
CAPN3-206ENST00000397163 CYLC1P35663 651 aaPredicted RBP10.25□□□□□ -0.77
CAPN3-206ENST00000397163 MRPS25P82663 173 aaKnown RBP10.25□□□□□ -0.77
CAPN3-206ENST00000397163 ATP2C1P98194 919 aaPredicted RBP10.25□□□□□ -0.77
CAPN3-206ENST00000397163 PDXDC2PQ6P474 469 aa10.25□□□□□ -0.77
CAPN3-206ENST00000397163 CCNI2Q6ZMN8 369 aaPredicted RBP10.25□□□□□ -0.77
CAPN3-206ENST00000397163 CATIPQ7Z7H3 387 aa10.25□□□□□ -0.77
CAPN3-206ENST00000397163 NLRP10Q86W26 655 aa10.25□□□□□ -0.77
CAPN3-206ENST00000397163 DNAJC10Q8IXB1 793 aa10.25□□□□□ -0.77
CAPN3-206ENST00000397163 RASSF8Q8NHQ8 419 aa10.25□□□□□ -0.77
CAPN3-206ENST00000397163 N4BP2L2Q92802 583 aaPredicted RBP10.25□□□□□ -0.77
CAPN3-206ENST00000397163 PCMTD1Q96MG8 357 aaPredicted RBP10.25□□□□□ -0.77
CAPN3-206ENST00000397163 MTRQ99707 1265 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms