RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 RILPQ96NA2 401 aa19.21■□□□□ 0.67
MCF2L-208ENST00000397030 SMYD2Q9NRG4 433 aa19.21■□□□□ 0.67
MCF2L-208ENST00000397030 ITM2BQ9Y287 266 aa19.21■□□□□ 0.67
MCF2L-208ENST00000397030 CRKLP46109 303 aaKnown RBP19.21■□□□□ 0.67
MCF2L-208ENST00000397030 NEDD9Q14511 834 aa19.21■□□□□ 0.67
MCF2L-208ENST00000397030 FAM207AQ9NSI2 230 aaPredicted RBP19.21■□□□□ 0.67
MCF2L-208ENST00000397030 IREB2P48200 963 aaKnown RBP19.2■□□□□ 0.66
MCF2L-208ENST00000397030 OSTNP61366 133 aa19.2■□□□□ 0.66
MCF2L-208ENST00000397030 FOXD4Q12950 439 aaPredicted RBP19.2■□□□□ 0.66
MCF2L-208ENST00000397030 KLHL40Q2TBA0 621 aa19.2■□□□□ 0.66
MCF2L-208ENST00000397030 ZNF496Q96IT1 587 aaPredicted RBP19.2■□□□□ 0.66
MCF2L-208ENST00000397030 ATP8A2Q9NTI2 1148 aa19.2■□□□□ 0.66
MCF2L-208ENST00000397030 TYW1BQ6NUM6 668 aa19.2■□□□□ 0.66
MCF2L-208ENST00000397030 C2orf69Q8N8R5 385 aa19.2■□□□□ 0.66
MCF2L-208ENST00000397030 KRT12Q99456 494 aa19.2■□□□□ 0.66
MCF2L-208ENST00000397030 RBSNQ9H1K0 784 aa19.2■□□□□ 0.66
MCF2L-208ENST00000397030 RABEP2Q9H5N1 569 aa19.2■□□□□ 0.66
MCF2L-208ENST00000397030 C1orf112Q9NSG2 853 aa19.2■□□□□ 0.66
MCF2L-208ENST00000397030 INO80B-WBP1J3KQ70 363 aa19.2■□□□□ 0.66
MCF2L-208ENST00000397030 PTPREP23469 700 aa19.2■□□□□ 0.66
MCF2L-208ENST00000397030 CYP4A11Q02928 519 aa19.2■□□□□ 0.66
MCF2L-208ENST00000397030 ZSCAN10Q96SZ4 725 aaPredicted RBP19.2■□□□□ 0.66
MCF2L-208ENST00000397030 INO80BQ9C086 356 aaPredicted RBP19.2■□□□□ 0.66
MCF2L-208ENST00000397030 PANK4Q9NVE7 773 aa19.2■□□□□ 0.66
MCF2L-208ENST00000397030 SERPINB2P05120 415 aa19.2■□□□□ 0.66
MCF2L-208ENST00000397030 ARMCX5Q6P1M9 558 aa19.2■□□□□ 0.66
MCF2L-208ENST00000397030 GDAP1Q8TB36 358 aa19.2■□□□□ 0.66
MCF2L-208ENST00000397030 IVLP07476 585 aa19.19■□□□□ 0.66
MCF2L-208ENST00000397030 RETREG2Q8NC44 543 aa19.19■□□□□ 0.66
MCF2L-208ENST00000397030 ARHGEF2Q92974 986 aaKnown RBP19.19■□□□□ 0.66
MCF2L-208ENST00000397030 ALKBH8Q96BT7 664 aaKnown RBP19.19■□□□□ 0.66
MCF2L-208ENST00000397030 KDM3AQ9Y4C1 1321 aa19.19■□□□□ 0.66
MCF2L-208ENST00000397030 SECISBP2LQ93073 1101 aaKnown RBP19.19■□□□□ 0.66
MCF2L-208ENST00000397030 DACT3Q96B18 629 aaPredicted RBP19.19■□□□□ 0.66
MCF2L-208ENST00000397030 LGSNQ5TDP6 509 aa19.19■□□□□ 0.66
MCF2L-208ENST00000397030 CAPN2P17655 700 aa19.18■□□□□ 0.66
MCF2L-208ENST00000397030 IL1RL1Q01638 556 aa19.18■□□□□ 0.66
MCF2L-208ENST00000397030 SLC12A1Q13621 1099 aa19.18■□□□□ 0.66
MCF2L-208ENST00000397030 RRAGAQ7L523 313 aa19.18■□□□□ 0.66
MCF2L-208ENST00000397030 ANGPTL3Q9Y5C1 460 aa19.18■□□□□ 0.66
MCF2L-208ENST00000397030 A6NJR5 290 aa19.18■□□□□ 0.66
MCF2L-208ENST00000397030 MIS18BP1Q6P0N0 1132 aa19.18■□□□□ 0.66
MCF2L-208ENST00000397030 PFDN6O15212 129 aa19.18■□□□□ 0.66
MCF2L-208ENST00000397030 NOLC1Q14978 699 aaKnown RBP eCLIP19.18■□□□□ 0.663e-6■■■■■ 34
MCF2L-208ENST00000397030 LONRF2Q1L5Z9 754 aa19.18■□□□□ 0.66
MCF2L-208ENST00000397030 PPP4R1Q8TF05 950 aa19.18■□□□□ 0.66
MCF2L-208ENST00000397030 HDAC11Q96DB2 347 aa19.18■□□□□ 0.66
MCF2L-208ENST00000397030 ANXA13P27216 316 aa19.18■□□□□ 0.66
MCF2L-208ENST00000397030 TTLL7Q6ZT98 887 aa19.18■□□□□ 0.66
MCF2L-208ENST00000397030 PLEKHM2Q8IWE5 1019 aa19.18■□□□□ 0.66
MCF2L-208ENST00000397030 GNL1P36915 607 aaPredicted RBP19.18■□□□□ 0.66
MCF2L-208ENST00000397030 PDE6CP51160 858 aa19.18■□□□□ 0.66
MCF2L-208ENST00000397030 HADHQ16836 314 aaKnown RBP19.18■□□□□ 0.66
MCF2L-208ENST00000397030 MCUQ8NE86 351 aa19.18■□□□□ 0.66
MCF2L-208ENST00000397030 SBNO1A3KN83 1393 aa19.18■□□□□ 0.66
MCF2L-208ENST00000397030 ZBTB7AO95365 584 aa19.17■□□□□ 0.66
MCF2L-208ENST00000397030 VPS41P49754 854 aa19.17■□□□□ 0.66
MCF2L-208ENST00000397030 PRPSAP1Q14558 356 aa19.17■□□□□ 0.66
MCF2L-208ENST00000397030 TTBK2Q6IQ55 1244 aa19.17■□□□□ 0.66
MCF2L-208ENST00000397030 ZNF449Q6P9G9 518 aa19.17■□□□□ 0.66
MCF2L-208ENST00000397030 PEX26Q7Z412 305 aa19.17■□□□□ 0.66
MCF2L-208ENST00000397030 TRMT44Q8IYL2 757 aaKnown RBP19.17■□□□□ 0.66
MCF2L-208ENST00000397030 ZNF804BA4D1E1 1349 aa19.17■□□□□ 0.66
MCF2L-208ENST00000397030 CCND2P30279 289 aa19.17■□□□□ 0.66
MCF2L-208ENST00000397030 MTRQ99707 1265 aa19.17■□□□□ 0.66
MCF2L-208ENST00000397030 PCDHA12Q9UN75 941 aa19.17■□□□□ 0.66
MCF2L-208ENST00000397030 ECE1P42892 770 aa19.17■□□□□ 0.66
MCF2L-208ENST00000397030 ANKRD36BP1Q96IX9 119 aa19.17■□□□□ 0.66
MCF2L-208ENST00000397030 NT5C3AQ9H0P0 336 aa19.17■□□□□ 0.66
MCF2L-208ENST00000397030 HEXIM1O94992 359 aaKnown RBP19.17■□□□□ 0.66
MCF2L-208ENST00000397030 ELMSAN1Q6PJG2 1045 aa19.17■□□□□ 0.66
MCF2L-208ENST00000397030 SYNDIG1Q9H7V2 258 aa19.17■□□□□ 0.66
MCF2L-208ENST00000397030 PDZD4Q76G19 769 aaPredicted RBP19.16■□□□□ 0.66
MCF2L-208ENST00000397030 RAB3IPQ96QF0 476 aaPredicted RBP19.16■□□□□ 0.66
MCF2L-208ENST00000397030 TBX22Q9Y458 520 aa19.16■□□□□ 0.66
MCF2L-208ENST00000397030 ERVV-2B6SEH9 535 aa19.16■□□□□ 0.66
MCF2L-208ENST00000397030 MAP7Q14244 749 aa19.16■□□□□ 0.66
MCF2L-208ENST00000397030 SLFN12Q8IYM2 578 aa19.16■□□□□ 0.66
MCF2L-208ENST00000397030 OTUD7AQ8TE49 926 aaPredicted RBP19.16■□□□□ 0.66
MCF2L-208ENST00000397030 KCNG1Q9UIX4 513 aa19.16■□□□□ 0.66
MCF2L-208ENST00000397030 CPSF3Q9UKF6 684 aaKnown RBP19.16■□□□□ 0.66
MCF2L-208ENST00000397030 USP14P54578 494 aa19.16■□□□□ 0.66
MCF2L-208ENST00000397030 SNAP25P60880 206 aa19.16■□□□□ 0.66
MCF2L-208ENST00000397030 ADAT2Q7Z6V5 191 aaKnown RBP19.16■□□□□ 0.66
MCF2L-208ENST00000397030 LRRC43Q8N309 656 aa19.16■□□□□ 0.66
MCF2L-208ENST00000397030 NCAPGQ9BPX3 1015 aa19.16■□□□□ 0.66
MCF2L-208ENST00000397030 LOC102724428A0A0B4J2F2 783 aa19.16■□□□□ 0.66
MCF2L-208ENST00000397030 SIK1P57059 783 aa19.16■□□□□ 0.66
MCF2L-208ENST00000397030 PPM1KQ8N3J5 372 aa19.16■□□□□ 0.66
MCF2L-208ENST00000397030 C7orf31Q8N865 590 aa19.16■□□□□ 0.66
MCF2L-208ENST00000397030 FAM76AQ8TAV0 307 aa19.16■□□□□ 0.66
MCF2L-208ENST00000397030 DCTPP1Q9H773 170 aa19.16■□□□□ 0.66
MCF2L-208ENST00000397030 PCDHB4Q9Y5E5 795 aa19.16■□□□□ 0.66
MCF2L-208ENST00000397030 FBXW4P57775 412 aa19.16■□□□□ 0.66
MCF2L-208ENST00000397030 PPP2R3AQ06190 1150 aa19.16■□□□□ 0.66
MCF2L-208ENST00000397030 ATP2A3Q93084 1043 aa19.16■□□□□ 0.66
MCF2L-208ENST00000397030 CUTAO60888 179 aa19.16■□□□□ 0.66
MCF2L-208ENST00000397030 KRT40Q6A162 431 aa19.16■□□□□ 0.66
MCF2L-208ENST00000397030 CCDC62Q6P9F0 684 aa19.16■□□□□ 0.66
MCF2L-208ENST00000397030 FAM178BQ8IXR5 827 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms