RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 LY9Q9HBG7 655 aa34.37■■■■□ 3.09
CHCHD4-202ENST00000396914 CCDC69A6NI79 296 aa34.36■■■■□ 3.09
CHCHD4-202ENST00000396914 SH2B2O14492 632 aaPredicted RBP34.36■■■■□ 3.09
CHCHD4-202ENST00000396914 SLC4A3P48751 1232 aa34.36■■■■□ 3.09
CHCHD4-202ENST00000396914 SPATC1LQ9H0A9 340 aa34.36■■■■□ 3.09
CHCHD4-202ENST00000396914 ADAMTS5Q9UNA0 930 aa34.36■■■■□ 3.09
CHCHD4-202ENST00000396914 PARP1P09874 1014 aaKnown RBP34.35■■■■□ 3.09
CHCHD4-202ENST00000396914 SNHG28P0DPA3 235 aa34.35■■■■□ 3.09
CHCHD4-202ENST00000396914 CPA1P15085 419 aa34.35■■■■□ 3.09
CHCHD4-202ENST00000396914 CASTP20810 708 aaKnown RBP34.35■■■■□ 3.09
CHCHD4-202ENST00000396914 HOXD10P28358 340 aa34.35■■■■□ 3.09
CHCHD4-202ENST00000396914 TMEM132BQ14DG7 1078 aa34.35■■■■□ 3.09
CHCHD4-202ENST00000396914 GPATCH4Q5T3I0 446 aaKnown RBP34.35■■■■□ 3.09
CHCHD4-202ENST00000396914 TMTC2Q8N394 836 aa34.35■■■■□ 3.09
CHCHD4-202ENST00000396914 COA7Q96BR5 231 aa34.35■■■■□ 3.09
CHCHD4-202ENST00000396914 PORCNQ9H237 461 aa34.35■■■■□ 3.09
CHCHD4-202ENST00000396914 CPXCR1Q8N123 301 aa34.34■■■■□ 3.09
CHCHD4-202ENST00000396914 MGAMO43451 1857 aa34.33■■■■□ 3.09
CHCHD4-202ENST00000396914 PLA2G6O60733 806 aa34.33■■■■□ 3.09
CHCHD4-202ENST00000396914 GNRH1P01148 92 aa34.33■■■■□ 3.09
CHCHD4-202ENST00000396914 MAPK4P31152 587 aa34.33■■■■□ 3.09
CHCHD4-202ENST00000396914 SYDE2Q5VT97 1194 aa34.33■■■■□ 3.09
CHCHD4-202ENST00000396914 NUP133Q8WUM0 1156 aa34.33■■■■□ 3.09
CHCHD4-202ENST00000396914 PRR12Q9ULL5 1215 aa34.33■■■■□ 3.09
CHCHD4-202ENST00000396914 A0A0G2JMZ2 1700 aa34.33■■■■□ 3.09
CHCHD4-202ENST00000396914 WDR19Q8NEZ3 1342 aa34.33■■■■□ 3.09
CHCHD4-202ENST00000396914 COL11A1P12107 1806 aaPredicted RBP34.32■■■■□ 3.09
CHCHD4-202ENST00000396914 EXOSC10Q01780 885 aaKnown RBP34.32■■■■□ 3.08
CHCHD4-202ENST00000396914 ASPRV1Q53RT3 343 aa34.32■■■■□ 3.08
CHCHD4-202ENST00000396914 NCAPG2Q86XI2 1143 aa34.32■■■■□ 3.08
CHCHD4-202ENST00000396914 MOV10L1Q9BXT6 1211 aaKnown RBP34.32■■■■□ 3.08
CHCHD4-202ENST00000396914 SNAP25P60880 206 aa34.31■■■■□ 3.08
CHCHD4-202ENST00000396914 SLC38A10Q9HBR0 1119 aa34.31■■■■□ 3.08
CHCHD4-202ENST00000396914 RAVER2Q9HCJ3 691 aaKnown RBP34.31■■■■□ 3.08
CHCHD4-202ENST00000396914 DHX16O60231 1041 aaKnown RBP34.3■■■■□ 3.08
CHCHD4-202ENST00000396914 FDX1P10109 184 aa34.3■■■■□ 3.08
CHCHD4-202ENST00000396914 STAT3P40763 770 aa34.3■■■■□ 3.08
CHCHD4-202ENST00000396914 CCDC174Q6PII3 467 aa34.3■■■■□ 3.08
CHCHD4-202ENST00000396914 ZNF654Q8IZM8 581 aa34.3■■■■□ 3.08
CHCHD4-202ENST00000396914 MCOLN1Q9GZU1 580 aa34.3■■■■□ 3.08
CHCHD4-202ENST00000396914 UBA5Q9GZZ9 404 aa34.3■■■■□ 3.08
CHCHD4-202ENST00000396914 LIFRP42702 1097 aa34.3■■■■□ 3.08
CHCHD4-202ENST00000396914 PKN2Q16513 984 aaKnown RBP34.3■■■■□ 3.08
CHCHD4-202ENST00000396914 SNRNP48Q6IEG0 339 aaKnown RBP34.3■■■■□ 3.08
CHCHD4-202ENST00000396914 SYNE3Q6ZMZ3 975 aa34.3■■■■□ 3.08
CHCHD4-202ENST00000396914 MYL10Q9BUA6 226 aa34.3■■■■□ 3.08
CHCHD4-202ENST00000396914 SLC12A7Q9Y666 1083 aa34.3■■■■□ 3.08
CHCHD4-202ENST00000396914 RPS6KB1P23443 525 aa34.29■■■■□ 3.08
CHCHD4-202ENST00000396914 BTNL9Q6UXG8 535 aa34.29■■■■□ 3.08
CHCHD4-202ENST00000396914 PLEKHH3Q7Z736 793 aa34.29■■■■□ 3.08
CHCHD4-202ENST00000396914 REPS2Q8NFH8 660 aa34.29■■■■□ 3.08
CHCHD4-202ENST00000396914 CPVLQ9H3G5 476 aa34.29■■■■□ 3.08
CHCHD4-202ENST00000396914 SRRDQ9UH36 339 aa34.29■■■■□ 3.08
CHCHD4-202ENST00000396914 ZNF214Q9UL59 606 aaPredicted RBP34.29■■■■□ 3.08
CHCHD4-202ENST00000396914 NAP1L2Q9ULW6 460 aaPredicted RBP34.29■■■■□ 3.08
CHCHD4-202ENST00000396914 CYP46A1Q9Y6A2 500 aa34.29■■■■□ 3.08
CHCHD4-202ENST00000396914 IVNS1ABPQ9Y6Y0 642 aa34.29■■■■□ 3.08
CHCHD4-202ENST00000396914 ERCC3P19447 782 aa34.28■■■■□ 3.08
CHCHD4-202ENST00000396914 PRKCZQ05513 592 aa34.28■■■■□ 3.08
CHCHD4-202ENST00000396914 Q6ZUG5 572 aa34.28■■■■□ 3.08
CHCHD4-202ENST00000396914 GPR142Q7Z601 462 aa34.28■■■■□ 3.08
CHCHD4-202ENST00000396914 TNS4Q8IZW8 715 aa34.28■■■■□ 3.08
CHCHD4-202ENST00000396914 TEX13BQ9BXU2 312 aa34.28■■■■□ 3.08
CHCHD4-202ENST00000396914 PTPN22Q9Y2R2 807 aa34.28■■■■□ 3.08
CHCHD4-202ENST00000396914 SLC25A27O95847 323 aa34.27■■■■□ 3.08
CHCHD4-202ENST00000396914 GRM4Q14833 912 aa34.27■■■■□ 3.08
CHCHD4-202ENST00000396914 RAET1EQ8TD07 263 aa34.27■■■■□ 3.08
CHCHD4-202ENST00000396914 DDAH1O94760 285 aa34.26■■■■□ 3.07
CHCHD4-202ENST00000396914 PRMT2P55345 433 aa34.26■■■■□ 3.07
CHCHD4-202ENST00000396914 TROAPQ12815 778 aa34.26■■■■□ 3.07
CHCHD4-202ENST00000396914 FBXO46Q6PJ61 603 aaPredicted RBP34.26■■■■□ 3.07
CHCHD4-202ENST00000396914 RUFY3Q7L099 469 aa34.26■■■■□ 3.07
CHCHD4-202ENST00000396914 RAB11FIP4Q86YS3 637 aa34.26■■■■□ 3.07
CHCHD4-202ENST00000396914 RIOX2Q8IUF8 465 aa34.26■■■■□ 3.07
CHCHD4-202ENST00000396914 STAG2Q8N3U4 1231 aa34.26■■■■□ 3.07
CHCHD4-202ENST00000396914 SHCBP1Q8NEM2 672 aa34.26■■■■□ 3.07
CHCHD4-202ENST00000396914 CTCFLQ8NI51 663 aaPredicted RBP34.26■■■■□ 3.07
CHCHD4-202ENST00000396914 MROH8Q9H579 483 aa34.26■■■■□ 3.07
CHCHD4-202ENST00000396914 VAT1LQ9HCJ6 419 aa34.26■■■■□ 3.07
CHCHD4-202ENST00000396914 MAD2L2Q9UI95 211 aa34.26■■■■□ 3.07
CHCHD4-202ENST00000396914 GABRQQ9UN88 632 aa34.26■■■■□ 3.07
CHCHD4-202ENST00000396914 KLRF2D3W0D1 207 aa34.25■■■■□ 3.07
CHCHD4-202ENST00000396914 UPF3BQ9BZI7 483 aaKnown RBP34.25■■■■□ 3.07
CHCHD4-202ENST00000396914 ZSWIM6Q9HCJ5 1215 aa34.25■■■■□ 3.07
CHCHD4-202ENST00000396914 RXRAP19793 462 aa34.24■■■■□ 3.07
CHCHD4-202ENST00000396914 OAZ1P54368 228 aa34.24■■■■□ 3.07
CHCHD4-202ENST00000396914 ANAPC15P60006 121 aa34.24■■■■□ 3.07
CHCHD4-202ENST00000396914 CCDC144CPQ8IYA2 1237 aa34.24■■■■□ 3.07
CHCHD4-202ENST00000396914 PTCH2Q9Y6C5 1203 aa34.24■■■■□ 3.07
CHCHD4-202ENST00000396914 CALM1P0DP23 149 aa34.23■■■■□ 3.07
CHCHD4-202ENST00000396914 CALM2P0DP24 149 aa34.23■■■■□ 3.07
CHCHD4-202ENST00000396914 CALM3P0DP25 149 aa34.23■■■■□ 3.07
CHCHD4-202ENST00000396914 KIF5BP33176 963 aa34.23■■■■□ 3.07
CHCHD4-202ENST00000396914 COPB2P35606 906 aa34.23■■■■□ 3.07
CHCHD4-202ENST00000396914 FLT3LGP49771 235 aa34.23■■■■□ 3.07
CHCHD4-202ENST00000396914 SGMS1Q86VZ5 419 aa34.23■■■■□ 3.07
CHCHD4-202ENST00000396914 NUDT12Q9BQG2 462 aa34.23■■■■□ 3.07
CHCHD4-202ENST00000396914 TM6SF1Q9BZW5 370 aa34.23■■■■□ 3.07
CHCHD4-202ENST00000396914 RANBP17Q9H2T7 1088 aaKnown RBP34.23■■■■□ 3.07
CHCHD4-202ENST00000396914 HOMER2Q9NSB8 354 aa34.23■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms