RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 NUP133Q8WUM0 1156 aa19.15■□□□□ 0.66
AP1S3-202ENST00000396653 ATG4CQ96DT6 458 aa19.15■□□□□ 0.66
AP1S3-202ENST00000396653 GPCPD1Q9NPB8 672 aa19.15■□□□□ 0.66
AP1S3-202ENST00000396653 RABGAP1Q9Y3P9 1069 aa19.15■□□□□ 0.66
AP1S3-202ENST00000396653 HSPA1AP0DMV8 641 aaKnown RBP19.14■□□□□ 0.65
AP1S3-202ENST00000396653 HSPA1BP0DMV9 641 aaKnown RBP19.14■□□□□ 0.65
AP1S3-202ENST00000396653 GNAQP50148 359 aa19.14■□□□□ 0.65
AP1S3-202ENST00000396653 NEK4P51957 841 aa19.14■□□□□ 0.65
AP1S3-202ENST00000396653 APOBRQ0VD83 1088 aa19.14■□□□□ 0.65
AP1S3-202ENST00000396653 IKQ13123 557 aaPredicted RBP19.14■□□□□ 0.65
AP1S3-202ENST00000396653 PPP2R5BQ15173 497 aa19.14■□□□□ 0.65
AP1S3-202ENST00000396653 SYDE2Q5VT97 1194 aa19.14■□□□□ 0.65
AP1S3-202ENST00000396653 TTBK2Q6IQ55 1244 aa19.14■□□□□ 0.65
AP1S3-202ENST00000396653 MICU3Q86XE3 530 aa19.14■□□□□ 0.65
AP1S3-202ENST00000396653 MYL10Q9BUA6 226 aa19.14■□□□□ 0.65
AP1S3-202ENST00000396653 RBM28Q9NW13 759 aaKnown RBP19.14■□□□□ 0.65
AP1S3-202ENST00000396653 PRR12Q9ULL5 1215 aa19.14■□□□□ 0.65
AP1S3-202ENST00000396653 VWA5AO00534 786 aa19.13■□□□□ 0.65
AP1S3-202ENST00000396653 GOLGA8HP0CJ92 632 aa19.13■□□□□ 0.65
AP1S3-202ENST00000396653 SMARCA1P28370 1054 aa19.13■□□□□ 0.65
AP1S3-202ENST00000396653 AK2P54819 239 aa19.13■□□□□ 0.65
AP1S3-202ENST00000396653 STAG2Q8N3U4 1231 aa19.13■□□□□ 0.65
AP1S3-202ENST00000396653 REPS2Q8NFH8 660 aa19.13■□□□□ 0.65
AP1S3-202ENST00000396653 KIFC2Q96AC6 838 aa19.13■□□□□ 0.65
AP1S3-202ENST00000396653 ZNF274Q96GC6 653 aaPredicted RBP19.13■□□□□ 0.65
AP1S3-202ENST00000396653 LZTS2Q9BRK4 669 aa19.13■□□□□ 0.65
AP1S3-202ENST00000396653 R3HDMLQ9H3Y0 253 aa19.13■□□□□ 0.65
AP1S3-202ENST00000396653 RBPJLQ9UBG7 517 aa19.13■□□□□ 0.65
AP1S3-202ENST00000396653 CPA4Q9UI42 421 aa19.13■□□□□ 0.65
AP1S3-202ENST00000396653 CEP350Q5VT06 3117 aa19.13■□□□□ 0.65
AP1S3-202ENST00000396653 GOLGA8AA7E2F4 631 aa19.12■□□□□ 0.65
AP1S3-202ENST00000396653 GOLGA8BA8MQT2 603 aa19.12■□□□□ 0.65
AP1S3-202ENST00000396653 KLRF2D3W0D1 207 aa19.12■□□□□ 0.65
AP1S3-202ENST00000396653 GPR25O00155 361 aa19.12■□□□□ 0.65
AP1S3-202ENST00000396653 ATP2A1O14983 1001 aa19.12■□□□□ 0.65
AP1S3-202ENST00000396653 CNMDO75829 334 aa19.12■□□□□ 0.65
AP1S3-202ENST00000396653 OAZ1P54368 228 aa19.12■□□□□ 0.65
AP1S3-202ENST00000396653 ERVK-9P63128 1117 aa19.12■□□□□ 0.65
AP1S3-202ENST00000396653 ERVK-24P63145 666 aa19.12■□□□□ 0.65
AP1S3-202ENST00000396653 POTEEQ6S8J3 1075 aa19.12■□□□□ 0.65
AP1S3-202ENST00000396653 FANCBQ8NB91 859 aa19.12■□□□□ 0.65
AP1S3-202ENST00000396653 CHMP4CQ96CF2 233 aa19.12■□□□□ 0.65
AP1S3-202ENST00000396653 RANBP17Q9H2T7 1088 aaKnown RBP19.12■□□□□ 0.65
AP1S3-202ENST00000396653 SLC38A10Q9HBR0 1119 aa19.12■□□□□ 0.65
AP1S3-202ENST00000396653 CCDC196A0A1B0GTZ2 297 aa19.11■□□□□ 0.65
AP1S3-202ENST00000396653 ZBED4O75132 1171 aa19.11■□□□□ 0.65
AP1S3-202ENST00000396653 RXRAP19793 462 aa19.11■□□□□ 0.65
AP1S3-202ENST00000396653 SLC16A2P36021 539 aa19.11■□□□□ 0.65
AP1S3-202ENST00000396653 METAP2P50579 478 aaKnown RBP eCLIP19.11■□□□□ 0.65
AP1S3-202ENST00000396653 RTN1Q16799 776 aa19.11■□□□□ 0.65
AP1S3-202ENST00000396653 ANKRD13CQ8N6S4 541 aa19.11■□□□□ 0.65
AP1S3-202ENST00000396653 GPRC5AQ8NFJ5 357 aa19.11■□□□□ 0.65
AP1S3-202ENST00000396653 PAGR1Q9BTK6 254 aa19.11■□□□□ 0.65
AP1S3-202ENST00000396653 SPZ1Q9BXG8 430 aa19.11■□□□□ 0.65
AP1S3-202ENST00000396653 TXNRD2Q9NNW7 524 aa19.11■□□□□ 0.65
AP1S3-202ENST00000396653 BTBD7Q9P203 1132 aa19.11■□□□□ 0.65
AP1S3-202ENST00000396653 PNMA2Q9UL42 364 aa19.11■□□□□ 0.65
AP1S3-202ENST00000396653 HPS5Q9UPZ3 1129 aa19.11■□□□□ 0.65
AP1S3-202ENST00000396653 FOXN1O15353 648 aa19.1■□□□□ 0.65
AP1S3-202ENST00000396653 HSPA8P11142 646 aaKnown RBP19.1■□□□□ 0.65
AP1S3-202ENST00000396653 PDIA3P30101 505 aaKnown RBP19.1■□□□□ 0.65
AP1S3-202ENST00000396653 COPB2P35606 906 aa19.1■□□□□ 0.65
AP1S3-202ENST00000396653 CTCFP49711 727 aaPredicted RBP19.1■□□□□ 0.65
AP1S3-202ENST00000396653 CCNA1P78396 465 aa19.1■□□□□ 0.65
AP1S3-202ENST00000396653 SP3Q02447 781 aa19.1■□□□□ 0.65
AP1S3-202ENST00000396653 SAMD1Q6SPF0 538 aaPredicted RBP19.1■□□□□ 0.65
AP1S3-202ENST00000396653 TMTC3Q6ZXV5 915 aa19.1■□□□□ 0.65
AP1S3-202ENST00000396653 UBA5Q9GZZ9 404 aa19.1■□□□□ 0.65
AP1S3-202ENST00000396653 RIOX1Q9H6W3 641 aa19.1■□□□□ 0.65
AP1S3-202ENST00000396653 ZNF214Q9UL59 606 aaPredicted RBP19.1■□□□□ 0.65
AP1S3-202ENST00000396653 CTDP1Q9Y5B0 961 aaPredicted RBP19.1■□□□□ 0.65
AP1S3-202ENST00000396653 PLXNB2O15031 1838 aa19.09■□□□□ 0.65
AP1S3-202ENST00000396653 BAZ2BQ9UIF8 2168 aaKnown RBP19.09■□□□□ 0.65
AP1S3-202ENST00000396653 RBBP6Q7Z6E9 1792 aaKnown RBP19.09■□□□□ 0.65
AP1S3-202ENST00000396653 ST18O60284 1047 aa19.09■□□□□ 0.65
AP1S3-202ENST00000396653 FKTNO75072 461 aa19.09■□□□□ 0.65
AP1S3-202ENST00000396653 TMEM132BQ14DG7 1078 aa19.09■□□□□ 0.65
AP1S3-202ENST00000396653 RAB11FIP4Q86YS3 637 aa19.09■□□□□ 0.65
AP1S3-202ENST00000396653 ADGRF4Q8IZF3 695 aa19.09■□□□□ 0.65
AP1S3-202ENST00000396653 SHCBP1Q8NEM2 672 aa19.09■□□□□ 0.65
AP1S3-202ENST00000396653 MTMR8Q96EF0 704 aa19.09■□□□□ 0.65
AP1S3-202ENST00000396653 TEX13BQ9BXU2 312 aa19.09■□□□□ 0.65
AP1S3-202ENST00000396653 SPATC1LQ9H0A9 340 aa19.09■□□□□ 0.65
AP1S3-202ENST00000396653 NAP1L2Q9ULW6 460 aaPredicted RBP19.09■□□□□ 0.65
AP1S3-202ENST00000396653 ZSWIM8A7E2V4 1837 aa19.09■□□□□ 0.65
AP1S3-202ENST00000396653 ZNF236Q9UL36 1845 aa19.09■□□□□ 0.65
AP1S3-202ENST00000396653 RIOX2Q8IUF8 465 aa19.08■□□□□ 0.64
AP1S3-202ENST00000396653 CCDC144CPQ8IYA2 1237 aa19.08■□□□□ 0.64
AP1S3-202ENST00000396653 ZNF296Q8WUU4 475 aaPredicted RBP19.08■□□□□ 0.64
AP1S3-202ENST00000396653 ERO1AQ96HE7 468 aa19.08■□□□□ 0.64
AP1S3-202ENST00000396653 CPVLQ9H3G5 476 aa19.08■□□□□ 0.64
AP1S3-202ENST00000396653 JMJD4Q9H9V9 463 aa19.08■□□□□ 0.64
AP1S3-202ENST00000396653 FAM217BQ9NTX9 383 aaPredicted RBP19.08■□□□□ 0.64
AP1S3-202ENST00000396653 TSKSQ9UJT2 592 aa19.08■□□□□ 0.64
AP1S3-202ENST00000396653 TPCN1Q9ULQ1 816 aa19.08■□□□□ 0.64
AP1S3-202ENST00000396653 CASP8AP2Q9UKL3 1982 aa19.08■□□□□ 0.64
AP1S3-202ENST00000396653 ZNF536O15090 1300 aa19.07■□□□□ 0.64
AP1S3-202ENST00000396653 CYTH3O43739 400 aa19.07■□□□□ 0.64
AP1S3-202ENST00000396653 DHX16O60231 1041 aaKnown RBP19.07■□□□□ 0.64
AP1S3-202ENST00000396653 PLEKHA8P1O95397 391 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms