RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 COPB1P53618 953 aaKnown RBP15.02■□□□□ -0
TRIM40-207ENST00000396581 RPS8P62241 208 aaKnown RBP15.02■□□□□ -0
TRIM40-207ENST00000396581 PPARAQ07869 468 aa15.02■□□□□ -0
TRIM40-207ENST00000396581 RRP12Q5JTH9 1297 aaKnown RBP15.02■□□□□ -0
TRIM40-207ENST00000396581 PDXDC2PQ6P474 469 aa15.02■□□□□ -0
TRIM40-207ENST00000396581 ZNF662Q6ZS27 426 aa15.02■□□□□ -0
TRIM40-207ENST00000396581 SUGCTQ9HAC7 445 aa15.02■□□□□ -0
TRIM40-207ENST00000396581 MED4Q9NPJ6 270 aa15.02■□□□□ -0
TRIM40-207ENST00000396581 MYO6Q9UM54 1294 aa15.02■□□□□ -0
TRIM40-207ENST00000396581 MYH6P13533 1939 aa15.02□□□□□ -0.01
TRIM40-207ENST00000396581 SNAP23O00161 211 aa15.02□□□□□ -0.01
TRIM40-207ENST00000396581 PSMD14O00487 310 aa15.02□□□□□ -0.01
TRIM40-207ENST00000396581 APBA3O96018 575 aa15.02□□□□□ -0.01
TRIM40-207ENST00000396581 TRAPPC11Q7Z392 1133 aa15.02□□□□□ -0.01
TRIM40-207ENST00000396581 NUP133Q8WUM0 1156 aa15.02□□□□□ -0.01
TRIM40-207ENST00000396581 CELF1Q92879 486 aaKnown RBP15.02□□□□□ -0.01
TRIM40-207ENST00000396581 VPS54Q9P1Q0 977 aa15.02□□□□□ -0.01
TRIM40-207ENST00000396581 MINPP1Q9UNW1 487 aa15.02□□□□□ -0.01
TRIM40-207ENST00000396581 CTNND2Q9UQB3 1225 aa15.02□□□□□ -0.01
TRIM40-207ENST00000396581 COL4A1P02462 1669 aa15.01□□□□□ -0.01
TRIM40-207ENST00000396581 TNKSO95271 1327 aa15.01□□□□□ -0.01
TRIM40-207ENST00000396581 N4BP3O15049 544 aa15.01□□□□□ -0.01
TRIM40-207ENST00000396581 N4BP1O75113 896 aaKnown RBP15.01□□□□□ -0.01
TRIM40-207ENST00000396581 AARSP49588 968 aaKnown RBP eCLIP15.01□□□□□ -0.01
TRIM40-207ENST00000396581 TCP11X2Q5H9J9 407 aa15.01□□□□□ -0.01
TRIM40-207ENST00000396581 CNBD1Q8NA66 436 aa15.01□□□□□ -0.01
TRIM40-207ENST00000396581 TRERF1Q96PN7 1200 aa15.01□□□□□ -0.01
TRIM40-207ENST00000396581 MTRQ99707 1265 aa15.01□□□□□ -0.01
TRIM40-207ENST00000396581 UBAC1Q9BSL1 405 aa15.01□□□□□ -0.01
TRIM40-207ENST00000396581 RASSF4Q9H2L5 321 aa15.01□□□□□ -0.01
TRIM40-207ENST00000396581 LCMT1Q9UIC8 334 aa15.01□□□□□ -0.01
TRIM40-207ENST00000396581 FAN1Q9Y2M0 1017 aa15.01□□□□□ -0.01
TRIM40-207ENST00000396581 REXO2Q9Y3B8 237 aaKnown RBP15.01□□□□□ -0.01
TRIM40-207ENST00000396581 GTPBP6O43824 516 aaPredicted RBP15.01□□□□□ -0.01
TRIM40-207ENST00000396581 TFRCP02786 760 aaKnown RBP15.01□□□□□ -0.01
TRIM40-207ENST00000396581 RHOXF2BP0C7M4 288 aa15.01□□□□□ -0.01
TRIM40-207ENST00000396581 CCT6AP40227 531 aaKnown RBP15.01□□□□□ -0.01
TRIM40-207ENST00000396581 AKAP17AQ02040 695 aaKnown RBP15.01□□□□□ -0.01
TRIM40-207ENST00000396581 UBE4AQ14139 1066 aa15.01□□□□□ -0.01
TRIM40-207ENST00000396581 LEKR1Q6ZMV7 388 aa15.01□□□□□ -0.01
TRIM40-207ENST00000396581 NOA1Q8NC60 698 aaKnown RBP15.01□□□□□ -0.01
TRIM40-207ENST00000396581 ESR2Q92731 530 aa15.01□□□□□ -0.01
TRIM40-207ENST00000396581 RHOXF2Q9BQY4 288 aa15.01□□□□□ -0.01
TRIM40-207ENST00000396581 RBM28Q9NW13 759 aaKnown RBP15.01□□□□□ -0.01
TRIM40-207ENST00000396581 DLEC1Q9Y238 1755 aa15□□□□□ -0.01
TRIM40-207ENST00000396581 LRRIQ3A6PVS8 624 aaPredicted RBP15□□□□□ -0.01
TRIM40-207ENST00000396581 TRAPPC10P48553 1259 aa15□□□□□ -0.01
TRIM40-207ENST00000396581 PAK1Q13153 545 aa15□□□□□ -0.01
TRIM40-207ENST00000396581 TTC38Q5R3I4 469 aa15□□□□□ -0.01
TRIM40-207ENST00000396581 ZNF658Q5TYW1 1059 aaPredicted RBP15□□□□□ -0.01
TRIM40-207ENST00000396581 CCDC24Q8N4L8 307 aa15□□□□□ -0.01
TRIM40-207ENST00000396581 ACBD3Q9H3P7 528 aa15□□□□□ -0.01
TRIM40-207ENST00000396581 TOMM22Q9NS69 142 aa15□□□□□ -0.01
TRIM40-207ENST00000396581 DUOX1Q9NRD9 1551 aa15□□□□□ -0.01
TRIM40-207ENST00000396581 NDUFA10O95299 355 aa14.99□□□□□ -0.01
TRIM40-207ENST00000396581 FGRP09769 529 aa14.99□□□□□ -0.01
TRIM40-207ENST00000396581 PRR5LQ6MZQ0 368 aa14.99□□□□□ -0.01
TRIM40-207ENST00000396581 AKT1S1Q96B36 256 aa14.99□□□□□ -0.01
TRIM40-207ENST00000396581 HAUS4Q9H6D7 363 aa14.99□□□□□ -0.01
TRIM40-207ENST00000396581 RRP15Q9Y3B9 282 aaKnown RBP14.99□□□□□ -0.01
TRIM40-207ENST00000396581 EPN1Q9Y6I3 576 aaPredicted RBP14.99□□□□□ -0.01
TRIM40-207ENST00000396581 A0A1W2PQC6 194 aa14.99□□□□□ -0.01
TRIM40-207ENST00000396581 KCNJ18B7U540 433 aa14.99□□□□□ -0.01
TRIM40-207ENST00000396581 CDC25AP30304 524 aa14.99□□□□□ -0.01
TRIM40-207ENST00000396581 KRT9P35527 623 aa14.99□□□□□ -0.01
TRIM40-207ENST00000396581 USP14P54578 494 aa14.99□□□□□ -0.01
TRIM40-207ENST00000396581 PTGDRQ13258 359 aa14.99□□□□□ -0.01
TRIM40-207ENST00000396581 KCNJ12Q14500 433 aa14.99□□□□□ -0.01
TRIM40-207ENST00000396581 RRAGBQ5VZM2 374 aa14.99□□□□□ -0.01
TRIM40-207ENST00000396581 PAPD7Q5XG87 772 aaKnown RBP14.99□□□□□ -0.01
TRIM40-207ENST00000396581 POTEAQ6S8J7 498 aa14.99□□□□□ -0.01
TRIM40-207ENST00000396581 ENAHQ8N8S7 591 aaPredicted RBP14.99□□□□□ -0.01
TRIM40-207ENST00000396581 ANKRD20A12PQ8NF67 263 aa14.99□□□□□ -0.01
TRIM40-207ENST00000396581 ZSCAN10Q96SZ4 725 aaPredicted RBP14.99□□□□□ -0.01
TRIM40-207ENST00000396581 NUP88Q99567 741 aaPredicted RBP14.99□□□□□ -0.01
TRIM40-207ENST00000396581 DNAJC7Q99615 494 aa14.99□□□□□ -0.01
TRIM40-207ENST00000396581 BRMS1Q9HCU9 246 aa14.99□□□□□ -0.01
TRIM40-207ENST00000396581 RMND1Q9NWS8 449 aa14.99□□□□□ -0.01
TRIM40-207ENST00000396581 MKRN1Q9UHC7 482 aaKnown RBP14.99□□□□□ -0.01
TRIM40-207ENST00000396581 MYH8P13535 1937 aa14.98□□□□□ -0.01
TRIM40-207ENST00000396581 TARSL2A2RTX5 802 aaKnown RBP14.98□□□□□ -0.01
TRIM40-207ENST00000396581 H7C1D1 291 aa14.98□□□□□ -0.01
TRIM40-207ENST00000396581 CALM1P0DP23 149 aa14.98□□□□□ -0.01
TRIM40-207ENST00000396581 CALM2P0DP24 149 aa14.98□□□□□ -0.01
TRIM40-207ENST00000396581 CALM3P0DP25 149 aa14.98□□□□□ -0.01
TRIM40-207ENST00000396581 MCM3P25205 808 aa14.98□□□□□ -0.01
TRIM40-207ENST00000396581 BCAMP50895 628 aa14.98□□□□□ -0.01
TRIM40-207ENST00000396581 TROAPQ12815 778 aa14.98□□□□□ -0.01
TRIM40-207ENST00000396581 ZNF174Q15697 407 aa14.98□□□□□ -0.01
TRIM40-207ENST00000396581 WWC2Q6AWC2 1192 aa14.98□□□□□ -0.01
TRIM40-207ENST00000396581 IRF2BP1Q8IU81 584 aa14.98□□□□□ -0.01
TRIM40-207ENST00000396581 RPGRIP1Q96KN7 1286 aa14.98□□□□□ -0.01
TRIM40-207ENST00000396581 SLF1Q9BQI6 1058 aa14.98□□□□□ -0.01
TRIM40-207ENST00000396581 VPS16Q9H269 839 aa14.98□□□□□ -0.01
TRIM40-207ENST00000396581 TFCP2L1Q9NZI6 479 aa14.98□□□□□ -0.01
TRIM40-207ENST00000396581 ZNF804BA4D1E1 1349 aa14.98□□□□□ -0.01
TRIM40-207ENST00000396581 ZC3H4Q9UPT8 1303 aaKnown RBP14.98□□□□□ -0.01
TRIM40-207ENST00000396581 TAF1P21675 1872 aa14.98□□□□□ -0.01
TRIM40-207ENST00000396581 SERPINB2P05120 415 aa14.97□□□□□ -0.01
TRIM40-207ENST00000396581 PCP11498 1178 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms