RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 RRP36Q96EU6 259 aaKnown RBP11.05□□□□□ -0.64
TRIM39-203ENST00000396547 IQSEC3Q9UPP2 1182 aaPredicted RBP11.05□□□□□ -0.64
TRIM39-203ENST00000396547 A0A087WUV0 522 aaPredicted RBP11.05□□□□□ -0.64
TRIM39-203ENST00000396547 SMIM22K7EJ46 135 aa11.05□□□□□ -0.64
TRIM39-203ENST00000396547 ZPR1O75312 459 aa11.05□□□□□ -0.64
TRIM39-203ENST00000396547 IDEP14735 1019 aa11.05□□□□□ -0.64
TRIM39-203ENST00000396547 PDE6AP16499 860 aa11.05□□□□□ -0.64
TRIM39-203ENST00000396547 IRAK1P51617 712 aa11.05□□□□□ -0.64
TRIM39-203ENST00000396547 TTF1Q15361 905 aaPredicted RBP11.05□□□□□ -0.64
TRIM39-203ENST00000396547 CNPY4Q8N129 248 aa11.05□□□□□ -0.64
TRIM39-203ENST00000396547 HDAC7Q8WUI4 952 aa11.05□□□□□ -0.64
TRIM39-203ENST00000396547 KAT2BQ92831 832 aa11.05□□□□□ -0.64
TRIM39-203ENST00000396547 CENPHQ9H3R5 247 aa11.05□□□□□ -0.64
TRIM39-203ENST00000396547 LUC7L2Q9Y383 392 aaKnown RBP11.05□□□□□ -0.64
TRIM39-203ENST00000396547 REXO2Q9Y3B8 237 aaKnown RBP11.05□□□□□ -0.64
TRIM39-203ENST00000396547 V9GY48 417 aaPredicted RBP11.05□□□□□ -0.64
TRIM39-203ENST00000396547 KIF13BQ9NQT8 1826 aa11.05□□□□□ -0.64
TRIM39-203ENST00000396547 CDHR2Q9BYE9 1310 aa11.04□□□□□ -0.64
TRIM39-203ENST00000396547 IPO7O95373 1038 aaKnown RBP11.04□□□□□ -0.64
TRIM39-203ENST00000396547 MCM7P33993 719 aa11.04□□□□□ -0.64
TRIM39-203ENST00000396547 TUBB2AQ13885 445 aa11.04□□□□□ -0.64
TRIM39-203ENST00000396547 KCTD19Q17RG1 926 aaPredicted RBP11.04□□□□□ -0.64
TRIM39-203ENST00000396547 NT5DC1Q5TFE4 455 aa11.04□□□□□ -0.64
TRIM39-203ENST00000396547 IFNL3Q8IZI9 196 aa11.04□□□□□ -0.64
TRIM39-203ENST00000396547 CTCFLQ8NI51 663 aaPredicted RBP11.04□□□□□ -0.64
TRIM39-203ENST00000396547 TUBB2BQ9BVA1 445 aa11.04□□□□□ -0.64
TRIM39-203ENST00000396547 TACC3Q9Y6A5 838 aa11.04□□□□□ -0.64
TRIM39-203ENST00000396547 PDE2AO00408 941 aaPredicted RBP11.04□□□□□ -0.64
TRIM39-203ENST00000396547 APBA3O96018 575 aa11.04□□□□□ -0.64
TRIM39-203ENST00000396547 IFNAR1P17181 557 aa11.04□□□□□ -0.64
TRIM39-203ENST00000396547 PBX1P40424 430 aa11.04□□□□□ -0.64
TRIM39-203ENST00000396547 RUFY1Q96T51 708 aa11.04□□□□□ -0.64
TRIM39-203ENST00000396547 CAPS2Q9BXY5 557 aa11.04□□□□□ -0.64
TRIM39-203ENST00000396547 LACRTQ9GZZ8 138 aa11.04□□□□□ -0.64
TRIM39-203ENST00000396547 EHD2Q9NZN4 543 aa11.04□□□□□ -0.64
TRIM39-203ENST00000396547 MTMR7Q9Y216 660 aa11.04□□□□□ -0.64
TRIM39-203ENST00000396547 BAZ2BQ9UIF8 2168 aaKnown RBP11.04□□□□□ -0.64
TRIM39-203ENST00000396547 SHTN1A0MZ66 631 aa11.04□□□□□ -0.64
TRIM39-203ENST00000396547 PRPF6O94906 941 aaKnown RBP11.04□□□□□ -0.64
TRIM39-203ENST00000396547 INPP5BP32019 993 aa11.04□□□□□ -0.64
TRIM39-203ENST00000396547 AMPD2Q01433 879 aa11.04□□□□□ -0.64
TRIM39-203ENST00000396547 PDCLQ13371 301 aa11.04□□□□□ -0.64
TRIM39-203ENST00000396547 RNF187Q5TA31 235 aaPredicted RBP11.04□□□□□ -0.64
TRIM39-203ENST00000396547 CDKAL1Q5VV42 579 aa11.04□□□□□ -0.64
TRIM39-203ENST00000396547 MMS22LQ6ZRQ5 1243 aa11.04□□□□□ -0.64
TRIM39-203ENST00000396547 ANKRD18AQ8IVF6 992 aa11.04□□□□□ -0.64
TRIM39-203ENST00000396547 CRACR2BQ8N4Y2 399 aaPredicted RBP11.04□□□□□ -0.64
TRIM39-203ENST00000396547 ANKRD13CQ8N6S4 541 aa11.04□□□□□ -0.64
TRIM39-203ENST00000396547 OR8K1Q8NGG5 319 aa11.04□□□□□ -0.64
TRIM39-203ENST00000396547 AKT1S1Q96B36 256 aa11.04□□□□□ -0.64
TRIM39-203ENST00000396547 MYCBPQ99417 103 aaPredicted RBP11.04□□□□□ -0.64
TRIM39-203ENST00000396547 UBAC1Q9BSL1 405 aa11.04□□□□□ -0.64
TRIM39-203ENST00000396547 CAPN7Q9Y6W3 813 aa11.04□□□□□ -0.64
TRIM39-203ENST00000396547 RPS6KA5O75582 802 aa11.03□□□□□ -0.64
TRIM39-203ENST00000396547 KLK7P49862 253 aa11.03□□□□□ -0.64
TRIM39-203ENST00000396547 NAP1L1P55209 391 aaKnown RBP11.03□□□□□ -0.64
TRIM39-203ENST00000396547 PAK1Q13153 545 aa11.03□□□□□ -0.64
TRIM39-203ENST00000396547 PTGDRQ13258 359 aa11.03□□□□□ -0.64
TRIM39-203ENST00000396547 TCIRG1Q13488 830 aa11.03□□□□□ -0.64
TRIM39-203ENST00000396547 SH2D3CQ8N5H7 860 aa11.03□□□□□ -0.64
TRIM39-203ENST00000396547 RCCD1A6NED2 376 aa11.03□□□□□ -0.64
TRIM39-203ENST00000396547 DEXIO95424 95 aa11.03□□□□□ -0.64
TRIM39-203ENST00000396547 TRIM21P19474 475 aaKnown RBP11.03□□□□□ -0.64
TRIM39-203ENST00000396547 RNASE9P60153 205 aaKnown RBP11.03□□□□□ -0.64
TRIM39-203ENST00000396547 TCP11X2Q5H9J9 407 aa11.03□□□□□ -0.64
TRIM39-203ENST00000396547 WDR93Q6P2C0 686 aa11.03□□□□□ -0.64
TRIM39-203ENST00000396547 TRAPPC11Q7Z392 1133 aa11.03□□□□□ -0.64
TRIM39-203ENST00000396547 FANCBQ8NB91 859 aa11.03□□□□□ -0.64
TRIM39-203ENST00000396547 STRBPQ96SI9 672 aaKnown RBP11.03□□□□□ -0.64
TRIM39-203ENST00000396547 FOXP1Q9H334 677 aaPredicted RBP11.03□□□□□ -0.64
TRIM39-203ENST00000396547 SLC4A4Q9Y6R1 1079 aa11.03□□□□□ -0.64
TRIM39-203ENST00000396547 C4AP0C0L4 1744 aa11.02□□□□□ -0.64
TRIM39-203ENST00000396547 AGPSO00116 658 aa11.02□□□□□ -0.64
TRIM39-203ENST00000396547 NDUFAB1O14561 156 aa11.02□□□□□ -0.64
TRIM39-203ENST00000396547 CCDC96Q2M329 555 aa11.02□□□□□ -0.64
TRIM39-203ENST00000396547 CCNI2Q6ZMN8 369 aaPredicted RBP11.02□□□□□ -0.64
TRIM39-203ENST00000396547 KRT26Q7Z3Y9 468 aa11.02□□□□□ -0.64
TRIM39-203ENST00000396547 CCDC51Q96ER9 411 aa11.02□□□□□ -0.64
TRIM39-203ENST00000396547 NCAPGQ9BPX3 1015 aa11.02□□□□□ -0.64
TRIM39-203ENST00000396547 GREM2Q9H772 168 aa11.02□□□□□ -0.64
TRIM39-203ENST00000396547 EPB41L4AQ9HCS5 686 aaPredicted RBP11.02□□□□□ -0.64
TRIM39-203ENST00000396547 AGPAT5Q9NUQ2 364 aa11.02□□□□□ -0.64
TRIM39-203ENST00000396547 BCCIPQ9P287 314 aaKnown RBP eCLIP11.02□□□□□ -0.64
TRIM39-203ENST00000396547 PARP1P09874 1014 aaKnown RBP11.02□□□□□ -0.65
TRIM39-203ENST00000396547 ITGA6P23229 1130 aa11.02□□□□□ -0.65
TRIM39-203ENST00000396547 HNRNPH1P31943 449 aaKnown RBP11.02□□□□□ -0.65
TRIM39-203ENST00000396547 HERVK_113P62684 666 aa11.02□□□□□ -0.65
TRIM39-203ENST00000396547 TUBB4BP68371 445 aa11.02□□□□□ -0.65
TRIM39-203ENST00000396547 SLC4A8Q2Y0W8 1093 aa11.02□□□□□ -0.65
TRIM39-203ENST00000396547 AKNAD1Q5T1N1 836 aa11.02□□□□□ -0.65
TRIM39-203ENST00000396547 MCTP2Q6DN12 878 aa11.02□□□□□ -0.65
TRIM39-203ENST00000396547 CCDC70Q6NSX1 233 aa11.02□□□□□ -0.65
TRIM39-203ENST00000396547 ZNF654Q8IZM8 581 aa11.02□□□□□ -0.65
TRIM39-203ENST00000396547 LRRC1Q9BTT6 524 aa11.02□□□□□ -0.65
TRIM39-203ENST00000396547 DMGDHQ9UI17 866 aaKnown RBP11.02□□□□□ -0.65
TRIM39-203ENST00000396547 A0A0G2JS52 829 aa11.02□□□□□ -0.65
TRIM39-203ENST00000396547 B4DLN1 442 aa11.02□□□□□ -0.65
TRIM39-203ENST00000396547 MYO1FO00160 1098 aa11.02□□□□□ -0.65
TRIM39-203ENST00000396547 CIAO1O76071 339 aa11.02□□□□□ -0.65
TRIM39-203ENST00000396547 PRCPP42785 496 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms