RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 PAGE5Q96GU1 130 aa18.31■□□□□ 0.52
SNX6-202ENST00000396526 TMOD2Q9NZR1 351 aa18.31■□□□□ 0.52
SNX6-202ENST00000396526 SERPINA10Q9UK55 444 aa18.31■□□□□ 0.52
SNX6-202ENST00000396526 ESYT2A0FGR8 921 aa18.31■□□□□ 0.52
SNX6-202ENST00000396526 MORC3Q14149 939 aa18.31■□□□□ 0.52
SNX6-202ENST00000396526 CCDC96Q2M329 555 aa18.31■□□□□ 0.52
SNX6-202ENST00000396526 NOM1Q5C9Z4 860 aaKnown RBP18.31■□□□□ 0.52
SNX6-202ENST00000396526 LRRC8AQ8IWT6 810 aa18.31■□□□□ 0.52
SNX6-202ENST00000396526 LRRC47Q8N1G4 583 aaKnown RBP18.31■□□□□ 0.52
SNX6-202ENST00000396526 ENOX1Q8TC92 643 aaKnown RBP18.31■□□□□ 0.52
SNX6-202ENST00000396526 PIGSQ96S52 555 aa18.31■□□□□ 0.52
SNX6-202ENST00000396526 RIOX1Q9H6W3 641 aa18.31■□□□□ 0.52
SNX6-202ENST00000396526 RMND1Q9NWS8 449 aa18.31■□□□□ 0.52
SNX6-202ENST00000396526 PYCARDQ9ULZ3 195 aa18.31■□□□□ 0.52
SNX6-202ENST00000396526 NRXN2Q9P2S2 1712 aa18.31■□□□□ 0.52
SNX6-202ENST00000396526 ANKRD31Q8N7Z5 1873 aa18.31■□□□□ 0.52
SNX6-202ENST00000396526 CHRNA5P30532 468 aa18.3■□□□□ 0.52
SNX6-202ENST00000396526 EN1Q05925 392 aaPredicted RBP18.3■□□□□ 0.52
SNX6-202ENST00000396526 ORC2Q13416 577 aaPredicted RBP18.3■□□□□ 0.52
SNX6-202ENST00000396526 DACT2Q5SW24 774 aa18.3■□□□□ 0.52
SNX6-202ENST00000396526 REXO1Q8N1G1 1221 aaKnown RBP18.3■□□□□ 0.52
SNX6-202ENST00000396526 UBA5Q9GZZ9 404 aa18.3■□□□□ 0.52
SNX6-202ENST00000396526 MYH1P12882 1939 aa18.3■□□□□ 0.52
SNX6-202ENST00000396526 TMC6Q7Z403 805 aa18.3■□□□□ 0.52
SNX6-202ENST00000396526 PPIP5K2O43314 1243 aa18.3■□□□□ 0.52
SNX6-202ENST00000396526 NPM3O75607 178 aaKnown RBP18.3■□□□□ 0.52
SNX6-202ENST00000396526 SFPQP23246 707 aaKnown RBP eCLIP18.3■□□□□ 0.52
SNX6-202ENST00000396526 EIF6P56537 245 aaKnown RBP18.3■□□□□ 0.52
SNX6-202ENST00000396526 EZH2Q15910 746 aaKnown RBP18.3■□□□□ 0.52
SNX6-202ENST00000396526 CACTINQ8WUQ7 758 aaKnown RBP18.3■□□□□ 0.52
SNX6-202ENST00000396526 PRPHP41219 470 aa18.29■□□□□ 0.52
SNX6-202ENST00000396526 STAT6P42226 847 aa18.29■□□□□ 0.52
SNX6-202ENST00000396526 TYW1BQ6NUM6 668 aa18.29■□□□□ 0.52
SNX6-202ENST00000396526 NEK8Q86SG6 692 aa18.29■□□□□ 0.52
SNX6-202ENST00000396526 CCDC47Q96A33 483 aaKnown RBP18.29■□□□□ 0.52
SNX6-202ENST00000396526 IDI2Q9BXS1 227 aa18.29■□□□□ 0.52
SNX6-202ENST00000396526 GPCPD1Q9NPB8 672 aa18.29■□□□□ 0.52
SNX6-202ENST00000396526 FRMPD2Q68DX3 1309 aaPredicted RBP18.29■□□□□ 0.52
SNX6-202ENST00000396526 PRR29P0C7W0 189 aa18.28■□□□□ 0.52
SNX6-202ENST00000396526 SKILP12757 684 aa18.28■□□□□ 0.52
SNX6-202ENST00000396526 TCP10Q12799 353 aa18.28■□□□□ 0.52
SNX6-202ENST00000396526 TPD52L1Q16890 204 aaPredicted RBP18.28■□□□□ 0.52
SNX6-202ENST00000396526 CERKLQ49MI3 558 aaPredicted RBP18.28■□□□□ 0.52
SNX6-202ENST00000396526 GRAMD1CQ8IYS0 662 aa18.28■□□□□ 0.52
SNX6-202ENST00000396526 PRIMPOLQ96LW4 560 aa18.28■□□□□ 0.52
SNX6-202ENST00000396526 AK8Q96MA6 479 aa18.28■□□□□ 0.52
SNX6-202ENST00000396526 CPVLQ9H3G5 476 aa18.28■□□□□ 0.52
SNX6-202ENST00000396526 KANSL2Q9H9L4 492 aa18.28■□□□□ 0.52
SNX6-202ENST00000396526 LTBP1Q14766 1721 aa18.28■□□□□ 0.52
SNX6-202ENST00000396526 SHMT1P34896 483 aa18.28■□□□□ 0.52
SNX6-202ENST00000396526 BAG6P46379 1132 aa18.28■□□□□ 0.52
SNX6-202ENST00000396526 ADCY7P51828 1080 aa18.28■□□□□ 0.52
SNX6-202ENST00000396526 LRMPQ12912 555 aa18.28■□□□□ 0.52
SNX6-202ENST00000396526 LETM2Q2VYF4 491 aa18.28■□□□□ 0.52
SNX6-202ENST00000396526 RRAGBQ5VZM2 374 aa18.28■□□□□ 0.52
SNX6-202ENST00000396526 SPATA20Q8TB22 786 aa18.28■□□□□ 0.52
SNX6-202ENST00000396526 GLT8D2Q9H1C3 349 aa18.28■□□□□ 0.52
SNX6-202ENST00000396526 FANCLQ9NW38 375 aa18.28■□□□□ 0.52
SNX6-202ENST00000396526 NFE2L3Q9Y4A8 694 aa18.28■□□□□ 0.52
SNX6-202ENST00000396526 IGKV6D-41A0A0C4DH26 115 aa18.28■□□□□ 0.52
SNX6-202ENST00000396526 GTPBP6O43824 516 aaPredicted RBP18.28■□□□□ 0.52
SNX6-202ENST00000396526 ZNF543Q08ER8 600 aa18.28■□□□□ 0.52
SNX6-202ENST00000396526 AOC3Q16853 763 aa18.28■□□□□ 0.52
SNX6-202ENST00000396526 CCDC144BQ3MJ40 725 aa18.28■□□□□ 0.52
SNX6-202ENST00000396526 SH3RF1Q7Z6J0 888 aa18.28■□□□□ 0.52
SNX6-202ENST00000396526 RTKN2Q8IZC4 609 aa18.28■□□□□ 0.52
SNX6-202ENST00000396526 M0R2N6 131 aa18.27■□□□□ 0.52
SNX6-202ENST00000396526 WNT7AO00755 349 aa18.27■□□□□ 0.52
SNX6-202ENST00000396526 MRPL12P52815 198 aaKnown RBP18.27■□□□□ 0.52
SNX6-202ENST00000396526 NFIAQ12857 509 aa18.27■□□□□ 0.52
SNX6-202ENST00000396526 PPP1R18Q6NYC8 613 aa18.27■□□□□ 0.52
SNX6-202ENST00000396526 HDAC9Q9UKV0 1011 aa18.27■□□□□ 0.52
SNX6-202ENST00000396526 PNMA6FA0A0J9YX94 578 aa18.27■□□□□ 0.52
SNX6-202ENST00000396526 RAD21O60216 631 aa18.27■□□□□ 0.52
SNX6-202ENST00000396526 TTLL6Q8N841 843 aa18.27■□□□□ 0.52
SNX6-202ENST00000396526 CAMKK2Q96RR4 588 aa18.27■□□□□ 0.52
SNX6-202ENST00000396526 CCNT1O60563 726 aaKnown RBP18.27■□□□□ 0.51
SNX6-202ENST00000396526 SNHG28P0DPA3 235 aa18.27■□□□□ 0.51
SNX6-202ENST00000396526 SLC35G1Q2M3R5 365 aa18.27■□□□□ 0.51
SNX6-202ENST00000396526 RAB34Q9BZG1 259 aa18.27■□□□□ 0.51
SNX6-202ENST00000396526 OR52Z1P0C646 297 aa18.26■□□□□ 0.51
SNX6-202ENST00000396526 CCDC93Q567U6 631 aa18.26■□□□□ 0.51
SNX6-202ENST00000396526 ANKRD20A12PQ8NF67 263 aa18.26■□□□□ 0.51
SNX6-202ENST00000396526 ANO8Q9HCE9 1232 aaPredicted RBP18.26■□□□□ 0.51
SNX6-202ENST00000396526 MYL1P05976 194 aa18.26■□□□□ 0.51
SNX6-202ENST00000396526 C17orf53Q8N3J3 647 aaPredicted RBP18.26■□□□□ 0.51
SNX6-202ENST00000396526 KCNQ5Q9NR82 932 aa18.26■□□□□ 0.51
SNX6-202ENST00000396526 ENTPD3O75355 529 aa18.25■□□□□ 0.51
SNX6-202ENST00000396526 DPYDQ12882 1025 aa18.25■□□□□ 0.51
SNX6-202ENST00000396526 FILIP1LQ4L180 1135 aa18.25■□□□□ 0.51
SNX6-202ENST00000396526 OGFOD1Q8N543 542 aa18.25■□□□□ 0.51
SNX6-202ENST00000396526 CCSER1Q9C0I3 900 aa18.25■□□□□ 0.51
SNX6-202ENST00000396526 CUEDC2Q9H467 287 aa18.25■□□□□ 0.51
SNX6-202ENST00000396526 ATP1A3P13637 1013 aa18.25■□□□□ 0.51
SNX6-202ENST00000396526 SEMA3FQ13275 785 aa18.25■□□□□ 0.51
SNX6-202ENST00000396526 TMEM266Q2M3C6 531 aa18.25■□□□□ 0.51
SNX6-202ENST00000396526 JAKMIP3Q5VZ66 844 aa18.25■□□□□ 0.51
SNX6-202ENST00000396526 KLHL10Q6JEL2 608 aa18.25■□□□□ 0.51
SNX6-202ENST00000396526 C4orf32Q8N8J7 132 aa18.25■□□□□ 0.51
SNX6-202ENST00000396526 NYAP2Q9P242 653 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms