RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 LOC285556D6RIA3 1793 aa17.76■□□□□ 0.43
VAMP1-202ENST00000396308 HSPA6P17066 643 aa17.76■□□□□ 0.43
VAMP1-202ENST00000396308 PTMSP20962 102 aa17.76■□□□□ 0.43
VAMP1-202ENST00000396308 BACE1P56817 501 aa17.76■□□□□ 0.43
VAMP1-202ENST00000396308 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.76■□□□□ 0.43
VAMP1-202ENST00000396308 BRAPQ7Z569 592 aa17.76■□□□□ 0.43
VAMP1-202ENST00000396308 ERO1BQ86YB8 467 aa17.76■□□□□ 0.43
VAMP1-202ENST00000396308 ADGRF4Q8IZF3 695 aa17.76■□□□□ 0.43
VAMP1-202ENST00000396308 C2orf69Q8N8R5 385 aa17.76■□□□□ 0.43
VAMP1-202ENST00000396308 AIFM3Q96NN9 605 aa17.76■□□□□ 0.43
VAMP1-202ENST00000396308 NUP88Q99567 741 aaPredicted RBP17.76■□□□□ 0.43
VAMP1-202ENST00000396308 TANGO6Q9C0B7 1094 aa17.76■□□□□ 0.43
VAMP1-202ENST00000396308 PNMA6FA0A0J9YX94 578 aa17.75■□□□□ 0.43
VAMP1-202ENST00000396308 hCG_1642624A0A1W2PR95 340 aa17.75■□□□□ 0.43
VAMP1-202ENST00000396308 CYTH3O43739 400 aa17.75■□□□□ 0.43
VAMP1-202ENST00000396308 MMP1P03956 469 aa17.75■□□□□ 0.43
VAMP1-202ENST00000396308 SLC16A2P36021 539 aa17.75■□□□□ 0.43
VAMP1-202ENST00000396308 NAPAP54920 295 aa17.75■□□□□ 0.43
VAMP1-202ENST00000396308 NLRP5P59047 1200 aa17.75■□□□□ 0.43
VAMP1-202ENST00000396308 PPATQ06203 517 aa17.75■□□□□ 0.43
VAMP1-202ENST00000396308 PKN1Q16512 942 aa17.75■□□□□ 0.43
VAMP1-202ENST00000396308 CSPP1Q1MSJ5 1256 aa17.75■□□□□ 0.43
VAMP1-202ENST00000396308 TTBK2Q6IQ55 1244 aa17.75■□□□□ 0.43
VAMP1-202ENST00000396308 GALNT17Q6IS24 598 aa17.75■□□□□ 0.43
VAMP1-202ENST00000396308 PPP1R18Q6NYC8 613 aa17.75■□□□□ 0.43
VAMP1-202ENST00000396308 DLK2Q6UY11 383 aa17.75■□□□□ 0.43
VAMP1-202ENST00000396308 FERMT3Q86UX7 667 aa17.75■□□□□ 0.43
VAMP1-202ENST00000396308 PIGSQ96S52 555 aa17.75■□□□□ 0.43
VAMP1-202ENST00000396308 ELP3Q9H9T3 547 aa17.75■□□□□ 0.43
VAMP1-202ENST00000396308 VPS54Q9P1Q0 977 aa17.75■□□□□ 0.43
VAMP1-202ENST00000396308 ZDHHC9Q9Y397 364 aa17.75■□□□□ 0.43
VAMP1-202ENST00000396308 CTDP1Q9Y5B0 961 aaPredicted RBP17.75■□□□□ 0.43
VAMP1-202ENST00000396308 PARP14Q460N5 1801 aa17.75■□□□□ 0.43
VAMP1-202ENST00000396308 DDX11L8A8MPP1 907 aa17.74■□□□□ 0.43
VAMP1-202ENST00000396308 TRAF5O00463 557 aa17.74■□□□□ 0.43
VAMP1-202ENST00000396308 ZBTB5O15062 677 aa17.74■□□□□ 0.43
VAMP1-202ENST00000396308 PLA2G6O60733 806 aa17.74■□□□□ 0.43
VAMP1-202ENST00000396308 NCLP19338 710 aaKnown RBP17.74■□□□□ 0.43
VAMP1-202ENST00000396308 KRT2P35908 639 aa17.74■□□□□ 0.43
VAMP1-202ENST00000396308 CDC37Q16543 378 aaPredicted RBP17.74■□□□□ 0.43
VAMP1-202ENST00000396308 BTNL9Q6UXG8 535 aa17.74■□□□□ 0.43
VAMP1-202ENST00000396308 C12orf42Q96LP6 360 aa17.74■□□□□ 0.43
VAMP1-202ENST00000396308 ZNF396Q96N95 335 aaPredicted RBP17.74■□□□□ 0.43
VAMP1-202ENST00000396308 CPVLQ9H3G5 476 aa17.74■□□□□ 0.43
VAMP1-202ENST00000396308 JMJD4Q9H9V9 463 aa17.74■□□□□ 0.43
VAMP1-202ENST00000396308 GBA2Q9HCG7 927 aaPredicted RBP17.74■□□□□ 0.43
VAMP1-202ENST00000396308 BARHL2Q9NY43 387 aa17.74■□□□□ 0.43
VAMP1-202ENST00000396308 SPDYE5A6NIY4 337 aa17.73■□□□□ 0.43
VAMP1-202ENST00000396308 CELF2O95319 508 aaKnown RBP17.73■□□□□ 0.43
VAMP1-202ENST00000396308 VCAM1P19320 739 aa17.73■□□□□ 0.43
VAMP1-202ENST00000396308 KRT85P78386 507 aa17.73■□□□□ 0.43
VAMP1-202ENST00000396308 RESTQ13127 1097 aa17.73■□□□□ 0.43
VAMP1-202ENST00000396308 WWC2Q6AWC2 1192 aa17.73■□□□□ 0.43
VAMP1-202ENST00000396308 BICD2Q8TD16 824 aa17.73■□□□□ 0.43
VAMP1-202ENST00000396308 GPKOWQ92917 476 aaPredicted RBP eCLIP17.73■□□□□ 0.43
VAMP1-202ENST00000396308 OTUD5Q96G74 571 aa17.73■□□□□ 0.43
VAMP1-202ENST00000396308 PHF20Q9BVI0 1012 aa17.73■□□□□ 0.43
VAMP1-202ENST00000396308 C6orf50Q9HD87 102 aa17.73■□□□□ 0.43
VAMP1-202ENST00000396308 PNMA2Q9UL42 364 aa17.73■□□□□ 0.43
VAMP1-202ENST00000396308 AFG3L2Q9Y4W6 797 aa17.73■□□□□ 0.43
VAMP1-202ENST00000396308 RBBP6Q7Z6E9 1792 aaKnown RBP17.73■□□□□ 0.43
VAMP1-202ENST00000396308 BAG4O95429 457 aaKnown RBP17.72■□□□□ 0.43
VAMP1-202ENST00000396308 FDX1P10109 184 aa17.72■□□□□ 0.43
VAMP1-202ENST00000396308 GNA11P29992 359 aa17.72■□□□□ 0.43
VAMP1-202ENST00000396308 HMGCS2P54868 508 aa17.72■□□□□ 0.43
VAMP1-202ENST00000396308 KIF23Q02241 960 aaPredicted RBP17.72■□□□□ 0.43
VAMP1-202ENST00000396308 PPIL2Q13356 520 aa17.72■□□□□ 0.43
VAMP1-202ENST00000396308 ATL3Q6DD88 541 aa17.72■□□□□ 0.43
VAMP1-202ENST00000396308 OTUD7BQ6GQQ9 843 aa17.72■□□□□ 0.43
VAMP1-202ENST00000396308 DIS3L2Q8IYB7 885 aaKnown RBP17.72■□□□□ 0.43
VAMP1-202ENST00000396308 KIFC2Q96AC6 838 aa17.72■□□□□ 0.43
VAMP1-202ENST00000396308 SLC10A4Q96EP9 437 aa17.72■□□□□ 0.43
VAMP1-202ENST00000396308 SLF1Q9BQI6 1058 aa17.72■□□□□ 0.43
VAMP1-202ENST00000396308 GLT8D2Q9H1C3 349 aa17.72■□□□□ 0.43
VAMP1-202ENST00000396308 FOXP1Q9H334 677 aaPredicted RBP17.72■□□□□ 0.43
VAMP1-202ENST00000396308 RPAP3Q9H6T3 665 aaPredicted RBP17.72■□□□□ 0.43
VAMP1-202ENST00000396308 PRR12Q9ULL5 1215 aa17.72■□□□□ 0.43
VAMP1-202ENST00000396308 KCNJ14Q9UNX9 436 aa17.72■□□□□ 0.43
VAMP1-202ENST00000396308 TCHHQ07283 1943 aa17.72■□□□□ 0.43
VAMP1-202ENST00000396308 UBE2Q2LH0YL09 131 aa17.71■□□□□ 0.43
VAMP1-202ENST00000396308 STXBP3O00186 592 aa17.71■□□□□ 0.43
VAMP1-202ENST00000396308 CXCL11O14625 94 aa17.71■□□□□ 0.43
VAMP1-202ENST00000396308 FLOT1O75955 427 aa17.71■□□□□ 0.43
VAMP1-202ENST00000396308 QRICH1Q2TAL8 776 aa17.71■□□□□ 0.43
VAMP1-202ENST00000396308 SAMD1Q6SPF0 538 aaPredicted RBP17.71■□□□□ 0.43
VAMP1-202ENST00000396308 CLEC17AQ6ZS10 378 aa17.71■□□□□ 0.43
VAMP1-202ENST00000396308 FBXO11Q86XK2 927 aa17.71■□□□□ 0.43
VAMP1-202ENST00000396308 PRPF38AQ8NAV1 312 aaKnown RBP17.71■□□□□ 0.43
VAMP1-202ENST00000396308 MTMR8Q96EF0 704 aa17.71■□□□□ 0.43
VAMP1-202ENST00000396308 AMNQ9BXJ7 453 aa17.71■□□□□ 0.43
VAMP1-202ENST00000396308 CFAP45Q9UL16 551 aa17.71■□□□□ 0.43
VAMP1-202ENST00000396308 NOL7Q9UMY1 257 aaKnown RBP17.71■□□□□ 0.43
VAMP1-202ENST00000396308 ESYT2A0FGR8 921 aa17.7■□□□□ 0.42
VAMP1-202ENST00000396308 ADCY7P51828 1080 aa17.7■□□□□ 0.42
VAMP1-202ENST00000396308 SLC35G1Q2M3R5 365 aa17.7■□□□□ 0.42
VAMP1-202ENST00000396308 FOXD4L6Q3SYB3 417 aaPredicted RBP17.7■□□□□ 0.42
VAMP1-202ENST00000396308 SH3D19Q5HYK7 790 aa17.7■□□□□ 0.42
VAMP1-202ENST00000396308 KIAA1755Q5JYT7 1200 aa17.7■□□□□ 0.42
VAMP1-202ENST00000396308 LDLRAD1Q5T700 205 aa17.7■□□□□ 0.42
VAMP1-202ENST00000396308 FOXD4L3Q6VB84 417 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms