RNA–Protein interactions for RNA: ENST00000396205.6

LMO3-205, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 3,534 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-205ENST00000396205 ESR2Q92731 530 aa7.79□□□□□ -1.16
LMO3-205ENST00000396205 HTATIP2Q9BUP3 242 aa7.79□□□□□ -1.16
LMO3-205ENST00000396205 UPF3AQ9H1J1 476 aaKnown RBP7.79□□□□□ -1.16
LMO3-205ENST00000396205 HMX1Q9NP08 348 aaPredicted RBP7.79□□□□□ -1.16
LMO3-205ENST00000396205 Q9Y3F1 56 aa7.79□□□□□ -1.16
LMO3-205ENST00000396205 U3KPZ7 1027 aaPredicted RBP7.79□□□□□ -1.16
LMO3-205ENST00000396205 ZNF536O15090 1300 aa7.79□□□□□ -1.16
LMO3-205ENST00000396205 CHMLP26374 656 aa7.79□□□□□ -1.16
LMO3-205ENST00000396205 LHX8Q68G74 356 aa7.79□□□□□ -1.16
LMO3-205ENST00000396205 U2AF1L4Q8WU68 220 aaKnown RBP7.79□□□□□ -1.16
LMO3-205ENST00000396205 KCNB2Q92953 911 aa7.79□□□□□ -1.16
LMO3-205ENST00000396205 MTMR8Q96EF0 704 aa7.79□□□□□ -1.16
LMO3-205ENST00000396205 DIAPH3Q9NSV4 1193 aa7.79□□□□□ -1.16
LMO3-205ENST00000396205 PCNTO95613 3336 aa7.79□□□□□ -1.16
LMO3-205ENST00000396205 BMP8BP34820 402 aa7.79□□□□□ -1.16
LMO3-205ENST00000396205 TFAP4Q01664 338 aa7.79□□□□□ -1.16
LMO3-205ENST00000396205 VPS53Q5VIR6 699 aa7.79□□□□□ -1.16
LMO3-205ENST00000396205 MAP4K1Q92918 833 aa7.79□□□□□ -1.16
LMO3-205ENST00000396205 TSEN34Q9BSV6 310 aaKnown RBP7.79□□□□□ -1.16
LMO3-205ENST00000396205 MYH6P13533 1939 aa7.79□□□□□ -1.16
LMO3-205ENST00000396205 TANC1Q9C0D5 1861 aa7.78□□□□□ -1.16
LMO3-205ENST00000396205 DNM1LO00429 736 aa7.78□□□□□ -1.16
LMO3-205ENST00000396205 ZBED4O75132 1171 aa7.78□□□□□ -1.16
LMO3-205ENST00000396205 FLOT1O75955 427 aa7.78□□□□□ -1.16
LMO3-205ENST00000396205 ICAM1P05362 532 aa7.78□□□□□ -1.16
LMO3-205ENST00000396205 FCER1AP12319 257 aa7.78□□□□□ -1.16
LMO3-205ENST00000396205 IMMTQ16891 758 aaKnown RBP7.78□□□□□ -1.16
LMO3-205ENST00000396205 ASPRV1Q53RT3 343 aa7.78□□□□□ -1.16
LMO3-205ENST00000396205 UBE2Q2Q8WVN8 375 aa7.78□□□□□ -1.16
LMO3-205ENST00000396205 ATG4CQ96DT6 458 aa7.78□□□□□ -1.16
LMO3-205ENST00000396205 IL17RAQ96F46 866 aa7.78□□□□□ -1.16
LMO3-205ENST00000396205 MAML3Q96JK9 1138 aa7.78□□□□□ -1.16
LMO3-205ENST00000396205 ERCC3P19447 782 aa7.78□□□□□ -1.16
LMO3-205ENST00000396205 MFSD6Q6ZSS7 791 aa7.78□□□□□ -1.16
LMO3-205ENST00000396205 SH3TC2Q8TF17 1288 aa7.78□□□□□ -1.16
LMO3-205ENST00000396205 UNC93B1Q9H1C4 597 aa7.78□□□□□ -1.16
LMO3-205ENST00000396205 IVNS1ABPQ9Y6Y0 642 aa7.78□□□□□ -1.16
LMO3-205ENST00000396205 TNRC18O15417 2968 aaPredicted RBP7.78□□□□□ -1.16
LMO3-205ENST00000396205 ZNF213O14771 459 aa7.78□□□□□ -1.16
LMO3-205ENST00000396205 ADORA2AP29274 412 aa7.78□□□□□ -1.16
LMO3-205ENST00000396205 STAT3P40763 770 aa7.78□□□□□ -1.16
LMO3-205ENST00000396205 CACNB2Q08289 660 aaPredicted RBP7.78□□□□□ -1.16
LMO3-205ENST00000396205 TRAF1Q13077 416 aa7.78□□□□□ -1.16
LMO3-205ENST00000396205 FAM83BQ5T0W9 1011 aa7.78□□□□□ -1.16
LMO3-205ENST00000396205 SLFN13Q68D06 897 aa7.78□□□□□ -1.16
LMO3-205ENST00000396205 TBC1D10CQ8IV04 446 aa7.78□□□□□ -1.16
LMO3-205ENST00000396205 DDX20Q9UHI6 824 aaKnown RBP7.78□□□□□ -1.16
LMO3-205ENST00000396205 HTTP42858 3142 aa7.78□□□□□ -1.16
LMO3-205ENST00000396205 RBM47A0AV96 593 aaKnown RBP7.77□□□□□ -1.17
LMO3-205ENST00000396205 MINDY4BA8MYZ0 360 aa7.77□□□□□ -1.17
LMO3-205ENST00000396205 SMIM22K7EJ46 135 aa7.77□□□□□ -1.17
LMO3-205ENST00000396205 SEPT4O43236 478 aa7.77□□□□□ -1.17
LMO3-205ENST00000396205 SOX10P56693 466 aa7.77□□□□□ -1.17
LMO3-205ENST00000396205 SEC23AQ15436 765 aa7.77□□□□□ -1.17
LMO3-205ENST00000396205 GPR153Q6NV75 609 aa7.77□□□□□ -1.17
LMO3-205ENST00000396205 KATNBL1Q9H079 304 aa7.77□□□□□ -1.17
LMO3-205ENST00000396205 FRMPD4Q14CM0 1322 aa7.77□□□□□ -1.17
LMO3-205ENST00000396205 TSPY2A6NKD2 308 aa7.77□□□□□ -1.17
LMO3-205ENST00000396205 PDHBP11177 359 aa7.77□□□□□ -1.17
LMO3-205ENST00000396205 ZNF543Q08ER8 600 aa7.77□□□□□ -1.17
LMO3-205ENST00000396205 FAM133AQ8N9E0 248 aa7.77□□□□□ -1.17
LMO3-205ENST00000396205 CLIP2Q9UDT6 1046 aa7.77□□□□□ -1.17
LMO3-205ENST00000396205 NEDD4P46934 1319 aa7.77□□□□□ -1.17
LMO3-205ENST00000396205 APPP05067 770 aa7.77□□□□□ -1.17
LMO3-205ENST00000396205 CCDC129Q6ZRS4 1044 aa7.77□□□□□ -1.17
LMO3-205ENST00000396205 NPLOC4Q8TAT6 608 aa7.77□□□□□ -1.17
LMO3-205ENST00000396205 FGD4Q96M96 766 aa7.77□□□□□ -1.17
LMO3-205ENST00000396205 MMP19Q99542 508 aa7.77□□□□□ -1.17
LMO3-205ENST00000396205 PHF24Q9UPV7 400 aa7.77□□□□□ -1.17
LMO3-205ENST00000396205 TRIM6-TRIM34B2RNG4 842 aa7.76□□□□□ -1.17
LMO3-205ENST00000396205 EDNRBP24530 442 aa7.76□□□□□ -1.17
LMO3-205ENST00000396205 MTFR1Q15390 333 aa7.76□□□□□ -1.17
LMO3-205ENST00000396205 IQCA1Q86XH1 822 aa7.76□□□□□ -1.17
LMO3-205ENST00000396205 DNERQ8NFT8 737 aa7.76□□□□□ -1.17
LMO3-205ENST00000396205 ZSCAN10Q96SZ4 725 aaPredicted RBP7.76□□□□□ -1.17
LMO3-205ENST00000396205 TMEM47Q9BQJ4 181 aa7.76□□□□□ -1.17
LMO3-205ENST00000396205 ACAD9Q9H845 621 aa7.76□□□□□ -1.17
LMO3-205ENST00000396205 FLRT1Q9NZU1 646 aa7.76□□□□□ -1.17
LMO3-205ENST00000396205 COL4A6Q14031 1691 aa7.76□□□□□ -1.17
LMO3-205ENST00000396205 COBLO75128 1261 aa7.76□□□□□ -1.17
LMO3-205ENST00000396205 FARP2O94887 1054 aaPredicted RBP7.76□□□□□ -1.17
LMO3-205ENST00000396205 PRKAR2AP13861 404 aaKnown RBP7.76□□□□□ -1.17
LMO3-205ENST00000396205 EN2P19622 333 aaPredicted RBP7.76□□□□□ -1.17
LMO3-205ENST00000396205 RNF208Q9H0X6 261 aa7.76□□□□□ -1.17
LMO3-205ENST00000396205 ZNF865P0CJ78 1059 aaPredicted RBP7.75□□□□□ -1.17
LMO3-205ENST00000396205 CTDSPL2Q05D32 466 aa7.75□□□□□ -1.17
LMO3-205ENST00000396205 KCTD2Q14681 263 aa7.75□□□□□ -1.17
LMO3-205ENST00000396205 SLC4A8Q2Y0W8 1093 aa7.75□□□□□ -1.17
LMO3-205ENST00000396205 NECAB2Q7Z6G3 386 aa7.75□□□□□ -1.17
LMO3-205ENST00000396205 IL27Q8NEV9 243 aa7.75□□□□□ -1.17
LMO3-205ENST00000396205 TINF2Q9BSI4 451 aa7.75□□□□□ -1.17
LMO3-205ENST00000396205 ABCB11O95342 1321 aa7.75□□□□□ -1.17
LMO3-205ENST00000396205 ASB14A6NK59 587 aa7.75□□□□□ -1.17
LMO3-205ENST00000396205 SLC1A4P43007 532 aa7.75□□□□□ -1.17
LMO3-205ENST00000396205 CCDC96Q2M329 555 aa7.75□□□□□ -1.17
LMO3-205ENST00000396205 FAM43BQ6ZT52 329 aaPredicted RBP7.75□□□□□ -1.17
LMO3-205ENST00000396205 FAM177A1Q8N128 213 aaPredicted RBP7.75□□□□□ -1.17
LMO3-205ENST00000396205 RILPL2Q969X0 211 aa7.75□□□□□ -1.17
LMO3-205ENST00000396205 YTHDC1Q96MU7 727 aaKnown RBP7.75□□□□□ -1.17
LMO3-205ENST00000396205 LSG1Q9H089 658 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms