RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 CSADQ9Y600 493 aa23.53■■□□□ 1.36
VCPKMT-202ENST00000395860 ZHX2Q9Y6X8 837 aa23.53■■□□□ 1.36
VCPKMT-202ENST00000395860 USP14P54578 494 aa23.52■■□□□ 1.36
VCPKMT-202ENST00000395860 NLRP5P59047 1200 aa23.52■■□□□ 1.36
VCPKMT-202ENST00000395860 SPP2Q13103 211 aa23.52■■□□□ 1.36
VCPKMT-202ENST00000395860 VGLL4Q14135 290 aa23.52■■□□□ 1.36
VCPKMT-202ENST00000395860 DIS3L2Q8IYB7 885 aaKnown RBP23.52■■□□□ 1.36
VCPKMT-202ENST00000395860 ZNF280CQ8ND82 737 aa23.52■■□□□ 1.36
VCPKMT-202ENST00000395860 CCDC148Q8NFR7 591 aa23.52■■□□□ 1.36
VCPKMT-202ENST00000395860 BARHL2Q9NY43 387 aa23.52■■□□□ 1.36
VCPKMT-202ENST00000395860 CNPY2Q9Y2B0 182 aa23.52■■□□□ 1.36
VCPKMT-202ENST00000395860 STAT2P52630 851 aa23.52■■□□□ 1.36
VCPKMT-202ENST00000395860 KRT85P78386 507 aa23.52■■□□□ 1.36
VCPKMT-202ENST00000395860 MTMR2Q13614 643 aa23.52■■□□□ 1.36
VCPKMT-202ENST00000395860 BTNL9Q6UXG8 535 aa23.52■■□□□ 1.36
VCPKMT-202ENST00000395860 LDHDQ86WU2 507 aa23.52■■□□□ 1.36
VCPKMT-202ENST00000395860 LPAR1Q92633 364 aa23.52■■□□□ 1.36
VCPKMT-202ENST00000395860 BRMS1Q9HCU9 246 aa23.52■■□□□ 1.36
VCPKMT-202ENST00000395860 NMRK2Q9NPI5 230 aa23.52■■□□□ 1.36
VCPKMT-202ENST00000395860 PNMA6FA0A0J9YX94 578 aa23.51■■□□□ 1.35
VCPKMT-202ENST00000395860 BTBD18B2RXH4 712 aa23.51■■□□□ 1.35
VCPKMT-202ENST00000395860 U2AF2P26368 475 aaKnown RBP eCLIP23.51■■□□□ 1.35
VCPKMT-202ENST00000395860 KRT2P35908 639 aa23.51■■□□□ 1.35
VCPKMT-202ENST00000395860 SYDE2Q5VT97 1194 aa23.51■■□□□ 1.35
VCPKMT-202ENST00000395860 MTMR8Q96EF0 704 aa23.51■■□□□ 1.35
VCPKMT-202ENST00000395860 FOXP1Q9H334 677 aaPredicted RBP23.51■■□□□ 1.35
VCPKMT-202ENST00000395860 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.51■■□□□ 1.35
VCPKMT-202ENST00000395860 SNCAIPQ9Y6H5 919 aa23.51■■□□□ 1.35
VCPKMT-202ENST00000395860 hCG_1984214I3L0E3 225 aa23.5■■□□□ 1.35
VCPKMT-202ENST00000395860 STXBP3O00186 592 aa23.5■■□□□ 1.35
VCPKMT-202ENST00000395860 ZBTB5O15062 677 aa23.5■■□□□ 1.35
VCPKMT-202ENST00000395860 BACE1P56817 501 aa23.5■■□□□ 1.35
VCPKMT-202ENST00000395860 ZNF713Q8N859 430 aaPredicted RBP23.5■■□□□ 1.35
VCPKMT-202ENST00000395860 CCDC12Q8WUD4 166 aaPredicted RBP23.5■■□□□ 1.35
VCPKMT-202ENST00000395860 TRIM75PA6NK02 468 aa23.5■■□□□ 1.35
VCPKMT-202ENST00000395860 WDR46O15213 610 aaKnown RBP23.5■■□□□ 1.35
VCPKMT-202ENST00000395860 CALML3P27482 149 aa23.5■■□□□ 1.35
VCPKMT-202ENST00000395860 NAPAP54920 295 aa23.5■■□□□ 1.35
VCPKMT-202ENST00000395860 ARMC9Q7Z3E5 817 aa23.5■■□□□ 1.35
VCPKMT-202ENST00000395860 ANKRD13AQ8IZ07 590 aa23.5■■□□□ 1.35
VCPKMT-202ENST00000395860 FAM177A1Q8N128 213 aaPredicted RBP23.5■■□□□ 1.35
VCPKMT-202ENST00000395860 CHURC1Q8WUH1 139 aa23.5■■□□□ 1.35
VCPKMT-202ENST00000395860 CDC37Q16543 378 aaPredicted RBP23.49■■□□□ 1.35
VCPKMT-202ENST00000395860 MAP3K11Q16584 847 aa23.49■■□□□ 1.35
VCPKMT-202ENST00000395860 TYW1BQ6NUM6 668 aa23.49■■□□□ 1.35
VCPKMT-202ENST00000395860 ZNF396Q96N95 335 aaPredicted RBP23.49■■□□□ 1.35
VCPKMT-202ENST00000395860 GDPD2Q9HCC8 539 aa23.49■■□□□ 1.35
VCPKMT-202ENST00000395860 TRAF5O00463 557 aa23.48■■□□□ 1.35
VCPKMT-202ENST00000395860 FIBPO43427 364 aa23.48■■□□□ 1.35
VCPKMT-202ENST00000395860 PTMSP20962 102 aa23.48■■□□□ 1.35
VCPKMT-202ENST00000395860 MOB2Q70IA6 237 aa23.48■■□□□ 1.35
VCPKMT-202ENST00000395860 FAM160B2Q86V87 743 aa23.48■■□□□ 1.35
VCPKMT-202ENST00000395860 NOSTRINQ8IVI9 506 aa23.48■■□□□ 1.35
VCPKMT-202ENST00000395860 OXER1Q8TDS5 423 aa23.48■■□□□ 1.35
VCPKMT-202ENST00000395860 TFIP11Q9UBB9 837 aaKnown RBP23.48■■□□□ 1.35
VCPKMT-202ENST00000395860 FEM1BQ9UK73 627 aa23.48■■□□□ 1.35
VCPKMT-202ENST00000395860 CFAP45Q9UL16 551 aa23.48■■□□□ 1.35
VCPKMT-202ENST00000395860 PRR12Q9ULL5 1215 aa23.48■■□□□ 1.35
VCPKMT-202ENST00000395860 C19orf81C9J6K1 198 aa23.47■■□□□ 1.35
VCPKMT-202ENST00000395860 PLA2G6O60733 806 aa23.47■■□□□ 1.35
VCPKMT-202ENST00000395860 NR5A1Q13285 461 aa23.47■■□□□ 1.35
VCPKMT-202ENST00000395860 DGKZQ13574 1117 aa23.47■■□□□ 1.35
VCPKMT-202ENST00000395860 MYSM1Q5VVJ2 828 aa23.47■■□□□ 1.35
VCPKMT-202ENST00000395860 ZNF408Q9H9D4 720 aa23.47■■□□□ 1.35
VCPKMT-202ENST00000395860 EMILIN3Q9NT22 766 aa23.47■■□□□ 1.35
VCPKMT-202ENST00000395860 AFG3L2Q9Y4W6 797 aa23.47■■□□□ 1.35
VCPKMT-202ENST00000395860 PTPRFP10586 1907 aa23.47■■□□□ 1.35
VCPKMT-202ENST00000395860 PRPF40AO75400 957 aaKnown RBP23.47■■□□□ 1.35
VCPKMT-202ENST00000395860 NPY5RQ15761 445 aa23.47■■□□□ 1.35
VCPKMT-202ENST00000395860 CSPP1Q1MSJ5 1256 aa23.47■■□□□ 1.35
VCPKMT-202ENST00000395860 QRICH1Q2TAL8 776 aa23.47■■□□□ 1.35
VCPKMT-202ENST00000395860 ATL3Q6DD88 541 aa23.47■■□□□ 1.35
VCPKMT-202ENST00000395860 GALNT17Q6IS24 598 aa23.47■■□□□ 1.35
VCPKMT-202ENST00000395860 COA7Q96BR5 231 aa23.47■■□□□ 1.35
VCPKMT-202ENST00000395860 ELP3Q9H9T3 547 aa23.47■■□□□ 1.35
VCPKMT-202ENST00000395860 PCDHA4Q9UN74 947 aa23.47■■□□□ 1.35
VCPKMT-202ENST00000395860 BLIDQ8IZY5 108 aa23.46■■□□□ 1.35
VCPKMT-202ENST00000395860 SCAND2PQ9GZW5 306 aaPredicted RBP23.46■■□□□ 1.35
VCPKMT-202ENST00000395860 PPP1R11O60927 126 aaPredicted RBP23.45■■□□□ 1.34
VCPKMT-202ENST00000395860 VCAM1P19320 739 aa23.45■■□□□ 1.34
VCPKMT-202ENST00000395860 HMGCS2P54868 508 aa23.45■■□□□ 1.34
VCPKMT-202ENST00000395860 KIFC2Q96AC6 838 aa23.45■■□□□ 1.34
VCPKMT-202ENST00000395860 ZMYND12Q9H0C1 365 aa23.45■■□□□ 1.34
VCPKMT-202ENST00000395860 C6orf50Q9HD87 102 aa23.45■■□□□ 1.34
VCPKMT-202ENST00000395860 PARP14Q460N5 1801 aa23.45■■□□□ 1.34
VCPKMT-202ENST00000395860 SMCO2A6NFE2 343 aa23.45■■□□□ 1.34
VCPKMT-202ENST00000395860 GNA11P29992 359 aa23.45■■□□□ 1.34
VCPKMT-202ENST00000395860 SNAP25P60880 206 aa23.45■■□□□ 1.34
VCPKMT-202ENST00000395860 FMR1Q06787 632 aaKnown RBP eCLIP23.45■■□□□ 1.34
VCPKMT-202ENST00000395860 PPP1R18Q6NYC8 613 aa23.45■■□□□ 1.34
VCPKMT-202ENST00000395860 SAMD1Q6SPF0 538 aaPredicted RBP23.45■■□□□ 1.34
VCPKMT-202ENST00000395860 DAGLBQ8NCG7 672 aa23.45■■□□□ 1.34
VCPKMT-202ENST00000395860 CLMNQ96JQ2 1002 aa23.45■■□□□ 1.34
VCPKMT-202ENST00000395860 C12orf42Q96LP6 360 aa23.45■■□□□ 1.34
VCPKMT-202ENST00000395860 TANGO6Q9C0B7 1094 aa23.45■■□□□ 1.34
VCPKMT-202ENST00000395860 LMBRD1Q9NUN5 540 aa23.45■■□□□ 1.34
VCPKMT-202ENST00000395860 TMOD4Q9NZQ9 345 aa23.45■■□□□ 1.34
VCPKMT-202ENST00000395860 CEBPZQ03701 1054 aaKnown RBP23.44■■□□□ 1.34
VCPKMT-202ENST00000395860 TMEM87AQ8NBN3 555 aa23.44■■□□□ 1.34
VCPKMT-202ENST00000395860 RBM46Q8TBY0 533 aaKnown RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms