RNA–Protein interactions for RNA: ENST00000395725.7

PTPN20-207, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 5 BASIC

Gene PTPN20, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-207ENST00000395725 FAM47AQ5JRC9 791 aa13.67□□□□□ -0.22
PTPN20-207ENST00000395725 CWC27Q6UX04 472 aaKnown RBP13.67□□□□□ -0.22
PTPN20-207ENST00000395725 DPP9Q86TI2 863 aa13.67□□□□□ -0.22
PTPN20-207ENST00000395725 KRT23Q9C075 422 aa13.67□□□□□ -0.22
PTPN20-207ENST00000395725 TFRCP02786 760 aaKnown RBP13.66□□□□□ -0.22
PTPN20-207ENST00000395725 PRKAR2AP13861 404 aaKnown RBP13.66□□□□□ -0.22
PTPN20-207ENST00000395725 GSPT1P15170 499 aaKnown RBP13.66□□□□□ -0.22
PTPN20-207ENST00000395725 SLC1A4P43007 532 aa13.66□□□□□ -0.22
PTPN20-207ENST00000395725 KCTD2Q14681 263 aa13.66□□□□□ -0.22
PTPN20-207ENST00000395725 NCAPG2Q86XI2 1143 aa13.66□□□□□ -0.22
PTPN20-207ENST00000395725 MMP19Q99542 508 aa13.66□□□□□ -0.22
PTPN20-207ENST00000395725 KIAA0100Q14667 2235 aaKnown RBP13.66□□□□□ -0.22
PTPN20-207ENST00000395725 ZNFX1Q9P2E3 1918 aaKnown RBP13.66□□□□□ -0.22
PTPN20-207ENST00000395725 LOC102724159A0A0B4J2E5 919 aa13.66□□□□□ -0.22
PTPN20-207ENST00000395725 ECM2O94769 699 aaPredicted RBP13.66□□□□□ -0.22
PTPN20-207ENST00000395725 CACNB2Q08289 660 aaPredicted RBP13.66□□□□□ -0.22
PTPN20-207ENST00000395725 PWP2Q15269 919 aaKnown RBP13.66□□□□□ -0.22
PTPN20-207ENST00000395725 WDR78Q5VTH9 848 aa13.66□□□□□ -0.22
PTPN20-207ENST00000395725 DEFB118Q96PH6 123 aa13.66□□□□□ -0.22
PTPN20-207ENST00000395725 CHMLP26374 656 aa13.65□□□□□ -0.22
PTPN20-207ENST00000395725 PLS1Q14651 629 aa13.65□□□□□ -0.22
PTPN20-207ENST00000395725 NECAB2Q7Z6G3 386 aa13.65□□□□□ -0.22
PTPN20-207ENST00000395725 IQCA1Q86XH1 822 aa13.65□□□□□ -0.22
PTPN20-207ENST00000395725 FBXO28Q9NVF7 368 aa13.65□□□□□ -0.22
PTPN20-207ENST00000395725 STX8Q9UNK0 236 aa13.65□□□□□ -0.22
PTPN20-207ENST00000395725 ZNF792Q3KQV3 632 aa13.64□□□□□ -0.23
PTPN20-207ENST00000395725 STK11IPQ8N1F8 1099 aa13.64□□□□□ -0.23
PTPN20-207ENST00000395725 LRRC47Q8N1G4 583 aaKnown RBP13.64□□□□□ -0.23
PTPN20-207ENST00000395725 NPLOC4Q8TAT6 608 aa13.64□□□□□ -0.23
PTPN20-207ENST00000395725 TACC3Q9Y6A5 838 aa13.64□□□□□ -0.23
PTPN20-207ENST00000395725 U3KPZ7 1027 aaPredicted RBP13.64□□□□□ -0.23
PTPN20-207ENST00000395725 PEX10O60683 326 aa13.64□□□□□ -0.23
PTPN20-207ENST00000395725 SNHG28P0DPA3 235 aa13.64□□□□□ -0.23
PTPN20-207ENST00000395725 MTA3Q9BTC8 594 aa13.64□□□□□ -0.23
PTPN20-207ENST00000395725 NBPF3Q9H094 633 aa13.64□□□□□ -0.23
PTPN20-207ENST00000395725 SYNGAP1Q96PV0 1343 aa13.64□□□□□ -0.23
PTPN20-207ENST00000395725 DNAJC25-GNG10A0A024R161 153 aa13.63□□□□□ -0.23
PTPN20-207ENST00000395725 TMEM232C9JQI7 657 aa13.63□□□□□ -0.23
PTPN20-207ENST00000395725 CYBAP13498 195 aa13.63□□□□□ -0.23
PTPN20-207ENST00000395725 GPATCH4Q5T3I0 446 aaKnown RBP13.63□□□□□ -0.23
PTPN20-207ENST00000395725 MAMDC4Q6UXC1 1216 aa13.63□□□□□ -0.23
PTPN20-207ENST00000395725 MAML3Q96JK9 1138 aa13.63□□□□□ -0.23
PTPN20-207ENST00000395725 TMEM47Q9BQJ4 181 aa13.63□□□□□ -0.23
PTPN20-207ENST00000395725 DDX20Q9UHI6 824 aaKnown RBP13.63□□□□□ -0.23
PTPN20-207ENST00000395725 NR2E3Q9Y5X4 410 aa13.63□□□□□ -0.23
PTPN20-207ENST00000395725 FRMPD3Q5JV73 1810 aa13.63□□□□□ -0.23
PTPN20-207ENST00000395725 PLXNA1Q9UIW2 1896 aa13.63□□□□□ -0.23
PTPN20-207ENST00000395725 SGSM2O43147 1006 aa13.63□□□□□ -0.23
PTPN20-207ENST00000395725 COBLO75128 1261 aa13.63□□□□□ -0.23
PTPN20-207ENST00000395725 CCL14Q16627 93 aa13.63□□□□□ -0.23
PTPN20-207ENST00000395725 LHX8Q68G74 356 aa13.63□□□□□ -0.23
PTPN20-207ENST00000395725 SNRNP48Q6IEG0 339 aaKnown RBP13.63□□□□□ -0.23
PTPN20-207ENST00000395725 TBC1D10CQ8IV04 446 aa13.63□□□□□ -0.23
PTPN20-207ENST00000395725 NUP88Q99567 741 aaPredicted RBP13.63□□□□□ -0.23
PTPN20-207ENST00000395725 TOMM22Q9NS69 142 aa13.63□□□□□ -0.23
PTPN20-207ENST00000395725 RAD21O60216 631 aa13.62□□□□□ -0.23
PTPN20-207ENST00000395725 ERICH6BQ5W0A0 696 aa13.62□□□□□ -0.23
PTPN20-207ENST00000395725 KIFC2Q96AC6 838 aa13.62□□□□□ -0.23
PTPN20-207ENST00000395725 RANBP17Q9H2T7 1088 aaKnown RBP13.62□□□□□ -0.23
PTPN20-207ENST00000395725 FLRT1Q9NZU1 646 aa13.62□□□□□ -0.23
PTPN20-207ENST00000395725 SEPT4O43236 478 aa13.62□□□□□ -0.23
PTPN20-207ENST00000395725 IRX6P78412 446 aaPredicted RBP13.62□□□□□ -0.23
PTPN20-207ENST00000395725 TRIM32Q13049 653 aa13.62□□□□□ -0.23
PTPN20-207ENST00000395725 BMP2KLQ5H9B9 411 aa13.62□□□□□ -0.23
PTPN20-207ENST00000395725 ARRDC4Q8NCT1 418 aa13.62□□□□□ -0.23
PTPN20-207ENST00000395725 ACAD9Q9H845 621 aa13.62□□□□□ -0.23
PTPN20-207ENST00000395725 PFASO15067 1338 aa13.61□□□□□ -0.23
PTPN20-207ENST00000395725 WDR19Q8NEZ3 1342 aa13.61□□□□□ -0.23
PTPN20-207ENST00000395725 MCCP23508 829 aa13.61□□□□□ -0.23
PTPN20-207ENST00000395725 RRP12Q5JTH9 1297 aaKnown RBP13.61□□□□□ -0.23
PTPN20-207ENST00000395725 TINF2Q9BSI4 451 aa13.61□□□□□ -0.23
PTPN20-207ENST00000395725 C11orf49Q9H6J7 331 aa13.61□□□□□ -0.23
PTPN20-207ENST00000395725 PRR12Q9ULL5 1215 aa13.61□□□□□ -0.23
PTPN20-207ENST00000395725 MYCP01106 439 aaPredicted RBP13.6□□□□□ -0.23
PTPN20-207ENST00000395725 ICAM1P05362 532 aa13.6□□□□□ -0.23
PTPN20-207ENST00000395725 PDHBP11177 359 aa13.6□□□□□ -0.23
PTPN20-207ENST00000395725 HAND2P61296 217 aa13.6□□□□□ -0.23
PTPN20-207ENST00000395725 ZNF543Q08ER8 600 aa13.6□□□□□ -0.23
PTPN20-207ENST00000395725 TRDNQ13061 729 aa13.6□□□□□ -0.23
PTPN20-207ENST00000395725 ZSCAN10Q96SZ4 725 aaPredicted RBP13.6□□□□□ -0.23
PTPN20-207ENST00000395725 INCENPQ9NQS7 918 aa13.6□□□□□ -0.23
PTPN20-207ENST00000395725 COL6A1P12109 1028 aa13.6□□□□□ -0.23
PTPN20-207ENST00000395725 CCND3P30281 292 aaPredicted RBP13.6□□□□□ -0.23
PTPN20-207ENST00000395725 ASPRV1Q53RT3 343 aa13.6□□□□□ -0.23
PTPN20-207ENST00000395725 SYDE2Q5VT97 1194 aa13.6□□□□□ -0.23
PTPN20-207ENST00000395725 MAP4K1Q92918 833 aa13.6□□□□□ -0.23
PTPN20-207ENST00000395725 DDX11Q96FC9 970 aa13.6□□□□□ -0.23
PTPN20-207ENST00000395725 ZNF536O15090 1300 aa13.6□□□□□ -0.23
PTPN20-207ENST00000395725 NEDD4P46934 1319 aa13.6□□□□□ -0.23
PTPN20-207ENST00000395725 DNM1LO00429 736 aa13.59□□□□□ -0.23
PTPN20-207ENST00000395725 NMT2O60551 498 aa13.59□□□□□ -0.23
PTPN20-207ENST00000395725 MNX1P50219 401 aaPredicted RBP13.59□□□□□ -0.23
PTPN20-207ENST00000395725 CCDC96Q2M329 555 aa13.59□□□□□ -0.23
PTPN20-207ENST00000395725 RGS22Q8NE09 1264 aa13.59□□□□□ -0.23
PTPN20-207ENST00000395725 RAVER2Q9HCJ3 691 aaKnown RBP13.59□□□□□ -0.23
PTPN20-207ENST00000395725 TRAF1Q13077 416 aa13.59□□□□□ -0.23
PTPN20-207ENST00000395725 IKQ13123 557 aaPredicted RBP13.59□□□□□ -0.23
PTPN20-207ENST00000395725 SAMD3Q8N6K7 520 aa13.59□□□□□ -0.23
PTPN20-207ENST00000395725 KAT14Q9H8E8 782 aa13.59□□□□□ -0.23
PTPN20-207ENST00000395725 ASB14A6NK59 587 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms