RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 CYBAP13498 195 aa16.16■□□□□ 0.18
SCAF11-203ENST00000395453 SNX17Q15036 470 aa16.16■□□□□ 0.18
SCAF11-203ENST00000395453 TJAP1Q5JTD0 557 aa16.16■□□□□ 0.18
SCAF11-203ENST00000395453 ANKRD45Q5TZF3 282 aa16.16■□□□□ 0.18
SCAF11-203ENST00000395453 IFNL3Q8IZI9 196 aa16.16■□□□□ 0.18
SCAF11-203ENST00000395453 TRPV1Q8NER1 839 aa16.16■□□□□ 0.18
SCAF11-203ENST00000395453 ATG4CQ96DT6 458 aa16.16■□□□□ 0.18
SCAF11-203ENST00000395453 MKNK2Q9HBH9 465 aa16.16■□□□□ 0.18
SCAF11-203ENST00000395453 GOPCQ9HD26 462 aa16.16■□□□□ 0.18
SCAF11-203ENST00000395453 NYAP2Q9P242 653 aa16.16■□□□□ 0.18
SCAF11-203ENST00000395453 ZNF236Q9UL36 1845 aa16.15■□□□□ 0.18
SCAF11-203ENST00000395453 IGKV6D-41A0A0C4DH26 115 aa16.15■□□□□ 0.18
SCAF11-203ENST00000395453 TNFRSF10AO00220 468 aa16.15■□□□□ 0.18
SCAF11-203ENST00000395453 ERCC3P19447 782 aa16.15■□□□□ 0.18
SCAF11-203ENST00000395453 AAMPQ13685 434 aa16.15■□□□□ 0.18
SCAF11-203ENST00000395453 TRIM60Q495X7 471 aa16.15■□□□□ 0.18
SCAF11-203ENST00000395453 ABRAQ8N0Z2 381 aa16.15■□□□□ 0.18
SCAF11-203ENST00000395453 MROH8Q9H579 483 aa16.15■□□□□ 0.18
SCAF11-203ENST00000395453 PDLIM7Q9NR12 457 aa16.15■□□□□ 0.18
SCAF11-203ENST00000395453 APPP05067 770 aa16.14■□□□□ 0.17
SCAF11-203ENST00000395453 ADORA2AP29274 412 aa16.14■□□□□ 0.17
SCAF11-203ENST00000395453 TDO2P48775 406 aa16.14■□□□□ 0.17
SCAF11-203ENST00000395453 TMEM132BQ14DG7 1078 aa16.14■□□□□ 0.17
SCAF11-203ENST00000395453 C1orf53Q5VUE5 145 aa16.14■□□□□ 0.17
SCAF11-203ENST00000395453 OLFML2BQ68BL8 750 aa16.14■□□□□ 0.17
SCAF11-203ENST00000395453 DPP9Q86TI2 863 aa16.14■□□□□ 0.17
SCAF11-203ENST00000395453 MKL1Q969V6 931 aa16.14■□□□□ 0.17
SCAF11-203ENST00000395453 RNPC3Q96LT9 517 aaKnown RBP16.14■□□□□ 0.17
SCAF11-203ENST00000395453 FSD1Q9BTV5 496 aa16.14■□□□□ 0.17
SCAF11-203ENST00000395453 ZNF287Q9HBT7 754 aa16.14■□□□□ 0.17
SCAF11-203ENST00000395453 FBXO28Q9NVF7 368 aa16.14■□□□□ 0.17
SCAF11-203ENST00000395453 COL11A1P12107 1806 aaPredicted RBP16.13■□□□□ 0.17
SCAF11-203ENST00000395453 TRIM43BA6NCK2 446 aa16.13■□□□□ 0.17
SCAF11-203ENST00000395453 VWA5AO00534 786 aa16.13■□□□□ 0.17
SCAF11-203ENST00000395453 SEPT4O43236 478 aa16.13■□□□□ 0.17
SCAF11-203ENST00000395453 COBLO75128 1261 aa16.13■□□□□ 0.17
SCAF11-203ENST00000395453 SLC25A27O95847 323 aa16.13■□□□□ 0.17
SCAF11-203ENST00000395453 PDE1AP54750 535 aa16.13■□□□□ 0.17
SCAF11-203ENST00000395453 STK11IPQ8N1F8 1099 aa16.13■□□□□ 0.17
SCAF11-203ENST00000395453 REPS2Q8NFH8 660 aa16.13■□□□□ 0.17
SCAF11-203ENST00000395453 TRIM43Q96BQ3 446 aaPredicted RBP16.13■□□□□ 0.17
SCAF11-203ENST00000395453 NACAP1Q9BZK3 213 aa16.13■□□□□ 0.17
SCAF11-203ENST00000395453 PPP1R9AQ9ULJ8 1098 aa16.13■□□□□ 0.17
SCAF11-203ENST00000395453 ZNFX1Q9P2E3 1918 aaKnown RBP16.12■□□□□ 0.17
SCAF11-203ENST00000395453 F5H6K3 240 aa16.12■□□□□ 0.17
SCAF11-203ENST00000395453 FOXP2O15409 715 aa16.12■□□□□ 0.17
SCAF11-203ENST00000395453 ADCYAP1R1P41586 468 aa16.12■□□□□ 0.17
SCAF11-203ENST00000395453 KLRC3Q07444 240 aa16.12■□□□□ 0.17
SCAF11-203ENST00000395453 PLS1Q14651 629 aa16.12■□□□□ 0.17
SCAF11-203ENST00000395453 FAM83BQ5T0W9 1011 aa16.12■□□□□ 0.17
SCAF11-203ENST00000395453 ANO1Q5XXA6 986 aa16.12■□□□□ 0.17
SCAF11-203ENST00000395453 SH3RF1Q7Z6J0 888 aa16.12■□□□□ 0.17
SCAF11-203ENST00000395453 TICAM2Q86XR7 235 aa16.12■□□□□ 0.17
SCAF11-203ENST00000395453 RIOX2Q8IUF8 465 aa16.12■□□□□ 0.17
SCAF11-203ENST00000395453 ZNF444Q8N0Y2 327 aaPredicted RBP16.12■□□□□ 0.17
SCAF11-203ENST00000395453 MTMR4Q9NYA4 1195 aa16.12■□□□□ 0.17
SCAF11-203ENST00000395453 ZBTB47Q9UFB7 747 aaPredicted RBP16.12■□□□□ 0.17
SCAF11-203ENST00000395453 TACC3Q9Y6A5 838 aa16.12■□□□□ 0.17
SCAF11-203ENST00000395453 PRDM1O75626 825 aa16.11■□□□□ 0.17
SCAF11-203ENST00000395453 NCAPG2Q86XI2 1143 aa16.11■□□□□ 0.17
SCAF11-203ENST00000395453 EVI5LQ96CN4 794 aa16.11■□□□□ 0.17
SCAF11-203ENST00000395453 CEP95Q96GE4 821 aa16.11■□□□□ 0.17
SCAF11-203ENST00000395453 YTHDC1Q96MU7 727 aaKnown RBP16.11■□□□□ 0.17
SCAF11-203ENST00000395453 CLIP2Q9UDT6 1046 aa16.11■□□□□ 0.17
SCAF11-203ENST00000395453 ZNF214Q9UL59 606 aaPredicted RBP16.11■□□□□ 0.17
SCAF11-203ENST00000395453 SYNPO2Q9UMS6 1093 aa16.11■□□□□ 0.17
SCAF11-203ENST00000395453 MYH4Q9Y623 1939 aa16.1■□□□□ 0.17
SCAF11-203ENST00000395453 NDUFB10O96000 172 aa16.1■□□□□ 0.17
SCAF11-203ENST00000395453 FCER1AP12319 257 aa16.1■□□□□ 0.17
SCAF11-203ENST00000395453 STAT3P40763 770 aa16.1■□□□□ 0.17
SCAF11-203ENST00000395453 TLE2Q04725 743 aa16.1■□□□□ 0.17
SCAF11-203ENST00000395453 PDE4BQ07343 736 aa16.1■□□□□ 0.17
SCAF11-203ENST00000395453 PPARAQ07869 468 aa16.1■□□□□ 0.17
SCAF11-203ENST00000395453 GRIN2CQ14957 1233 aa16.1■□□□□ 0.17
SCAF11-203ENST00000395453 LRRC41Q15345 812 aa16.1■□□□□ 0.17
SCAF11-203ENST00000395453 SMC5Q8IY18 1101 aa16.1■□□□□ 0.17
SCAF11-203ENST00000395453 NEDD1Q8NHV4 660 aa16.1■□□□□ 0.17
SCAF11-203ENST00000395453 FERMT2Q96AC1 680 aa16.1■□□□□ 0.17
SCAF11-203ENST00000395453 NUP88Q99567 741 aaPredicted RBP16.1■□□□□ 0.17
SCAF11-203ENST00000395453 NAPBQ9H115 298 aa16.1■□□□□ 0.17
SCAF11-203ENST00000395453 SLC5A4Q9NY91 659 aa16.1■□□□□ 0.17
SCAF11-203ENST00000395453 PLIN4Q96Q06 1357 aa16.1■□□□□ 0.17
SCAF11-203ENST00000395453 TTLL1O95922 423 aa16.09■□□□□ 0.17
SCAF11-203ENST00000395453 CLTBP09497 229 aa16.09■□□□□ 0.17
SCAF11-203ENST00000395453 PRPF38AQ8NAV1 312 aaKnown RBP16.09■□□□□ 0.17
SCAF11-203ENST00000395453 USP38Q8NB14 1042 aa16.09■□□□□ 0.17
SCAF11-203ENST00000395453 MAML3Q96JK9 1138 aa16.09■□□□□ 0.17
SCAF11-203ENST00000395453 PHF12Q96QT6 1004 aa16.09■□□□□ 0.17
SCAF11-203ENST00000395453 SLF1Q9BQI6 1058 aa16.09■□□□□ 0.17
SCAF11-203ENST00000395453 HELLSQ9NRZ9 838 aa16.09■□□□□ 0.17
SCAF11-203ENST00000395453 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.08■□□□□ 0.16
SCAF11-203ENST00000395453 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.08■□□□□ 0.16
SCAF11-203ENST00000395453 RAD21O60216 631 aa16.08■□□□□ 0.16
SCAF11-203ENST00000395453 SLC3A2P08195 630 aaKnown RBP16.08■□□□□ 0.16
SCAF11-203ENST00000395453 RAG1P15918 1043 aa16.08■□□□□ 0.16
SCAF11-203ENST00000395453 DNAJB2P25686 324 aa16.08■□□□□ 0.16
SCAF11-203ENST00000395453 COPB2P35606 906 aa16.08■□□□□ 0.16
SCAF11-203ENST00000395453 ALX1Q15699 326 aa16.08■□□□□ 0.16
SCAF11-203ENST00000395453 CCDC129Q6ZRS4 1044 aa16.08■□□□□ 0.16
SCAF11-203ENST00000395453 GMCL1P1Q8NEA9 526 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms