RNA–Protein interactions for RNA: ENST00000395205.6

BBS4-202, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best) BASIC

Gene BBS4, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-202ENST00000395205 ZHX2Q9Y6X8 837 aa11.38□□□□□ -0.59
BBS4-202ENST00000395205 KRT2P35908 639 aa11.37□□□□□ -0.59
BBS4-202ENST00000395205 CEBPZQ03701 1054 aaKnown RBP11.37□□□□□ -0.59
BBS4-202ENST00000395205 SPP2Q13103 211 aa11.37□□□□□ -0.59
BBS4-202ENST00000395205 CSPP1Q1MSJ5 1256 aa11.37□□□□□ -0.59
BBS4-202ENST00000395205 FAM83BQ5T0W9 1011 aa11.37□□□□□ -0.59
BBS4-202ENST00000395205 WWC2Q6AWC2 1192 aa11.37□□□□□ -0.59
BBS4-202ENST00000395205 BARHL2Q9NY43 387 aa11.37□□□□□ -0.59
BBS4-202ENST00000395205 CFAP45Q9UL16 551 aa11.37□□□□□ -0.59
BBS4-202ENST00000395205 PNMA6FA0A0J9YX94 578 aa11.37□□□□□ -0.59
BBS4-202ENST00000395205 POTEIP0CG38 1075 aa11.37□□□□□ -0.59
BBS4-202ENST00000395205 POTEJP0CG39 1038 aa11.37□□□□□ -0.59
BBS4-202ENST00000395205 U2AF2P26368 475 aaKnown RBP eCLIP11.37□□□□□ -0.593e-6■■■■□ 23.8
BBS4-202ENST00000395205 IREB2P48200 963 aaKnown RBP11.37□□□□□ -0.59
BBS4-202ENST00000395205 MAP1SQ66K74 1059 aaPredicted RBP11.37□□□□□ -0.59
BBS4-202ENST00000395205 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.37□□□□□ -0.596e-8■■■■■ 36.7
BBS4-202ENST00000395205 OXER1Q8TDS5 423 aa11.37□□□□□ -0.59
BBS4-202ENST00000395205 ZNF526Q8TF50 670 aaPredicted RBP11.37□□□□□ -0.59
BBS4-202ENST00000395205 SHISA4Q96DD7 197 aa11.37□□□□□ -0.59
BBS4-202ENST00000395205 FOXP1Q9H334 677 aaPredicted RBP11.37□□□□□ -0.59
BBS4-202ENST00000395205 RRAGDQ9NQL2 400 aaPredicted RBP11.37□□□□□ -0.59
BBS4-202ENST00000395205 STXBP3O00186 592 aa11.36□□□□□ -0.59
BBS4-202ENST00000395205 CALML3P27482 149 aa11.36□□□□□ -0.59
BBS4-202ENST00000395205 CLCN1P35523 988 aa11.36□□□□□ -0.59
BBS4-202ENST00000395205 NAPAP54920 295 aa11.36□□□□□ -0.59
BBS4-202ENST00000395205 NR5A1Q13285 461 aa11.36□□□□□ -0.59
BBS4-202ENST00000395205 TPRNQ4KMQ1 711 aa11.36□□□□□ -0.59
BBS4-202ENST00000395205 SYDE2Q5VT97 1194 aa11.36□□□□□ -0.59
BBS4-202ENST00000395205 SAMD1Q6SPF0 538 aaPredicted RBP11.36□□□□□ -0.59
BBS4-202ENST00000395205 ZNF280CQ8ND82 737 aa11.36□□□□□ -0.59
BBS4-202ENST00000395205 CCDC148Q8NFR7 591 aa11.36□□□□□ -0.59
BBS4-202ENST00000395205 CCDC12Q8WUD4 166 aaPredicted RBP11.36□□□□□ -0.59
BBS4-202ENST00000395205 CHURC1Q8WUH1 139 aa11.36□□□□□ -0.59
BBS4-202ENST00000395205 WDR18Q9BV38 432 aa11.36□□□□□ -0.59
BBS4-202ENST00000395205 KIAA1683Q9H0B3 1180 aa11.36□□□□□ -0.59
BBS4-202ENST00000395205 LMBRD1Q9NUN5 540 aa11.36□□□□□ -0.59
BBS4-202ENST00000395205 CSADQ9Y600 493 aa11.36□□□□□ -0.59
BBS4-202ENST00000395205 TRIM75PA6NK02 468 aa11.36□□□□□ -0.59
BBS4-202ENST00000395205 ZBTB5O15062 677 aa11.36□□□□□ -0.59
BBS4-202ENST00000395205 STAT2P52630 851 aa11.36□□□□□ -0.59
BBS4-202ENST00000395205 USP14P54578 494 aa11.36□□□□□ -0.59
BBS4-202ENST00000395205 MTMR2Q13614 643 aa11.36□□□□□ -0.59
BBS4-202ENST00000395205 NOL9Q5SY16 702 aaKnown RBP11.36□□□□□ -0.59
BBS4-202ENST00000395205 ATL3Q6DD88 541 aa11.36□□□□□ -0.59
BBS4-202ENST00000395205 NOSTRINQ8IVI9 506 aa11.36□□□□□ -0.59
BBS4-202ENST00000395205 COA7Q96BR5 231 aa11.36□□□□□ -0.59
BBS4-202ENST00000395205 SPATA32Q96LK8 384 aa11.36□□□□□ -0.59
BBS4-202ENST00000395205 SCAND2PQ9GZW5 306 aaPredicted RBP11.36□□□□□ -0.59
BBS4-202ENST00000395205 SSC5DA1L4H1 1573 aa11.36□□□□□ -0.59
BBS4-202ENST00000395205 SMCO2A6NFE2 343 aa11.35□□□□□ -0.59
BBS4-202ENST00000395205 SNAP25P60880 206 aa11.35□□□□□ -0.59
BBS4-202ENST00000395205 MAPK8IP2Q13387 824 aaPredicted RBP11.35□□□□□ -0.59
BBS4-202ENST00000395205 VGLL4Q14135 290 aa11.35□□□□□ -0.59
BBS4-202ENST00000395205 MYSM1Q5VVJ2 828 aa11.35□□□□□ -0.59
BBS4-202ENST00000395205 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.35□□□□□ -0.59
BBS4-202ENST00000395205 LPAR1Q92633 364 aa11.35□□□□□ -0.59
BBS4-202ENST00000395205 KIFC2Q96AC6 838 aa11.35□□□□□ -0.59
BBS4-202ENST00000395205 GREB1LQ9C091 1923 aaPredicted RBP11.35□□□□□ -0.59
BBS4-202ENST00000395205 hCG_1984214I3L0E3 225 aa11.35□□□□□ -0.59
BBS4-202ENST00000395205 TRAK2O60296 914 aa11.35□□□□□ -0.59
BBS4-202ENST00000395205 BACE1P56817 501 aa11.35□□□□□ -0.59
BBS4-202ENST00000395205 CDC37Q16543 378 aaPredicted RBP11.35□□□□□ -0.59
BBS4-202ENST00000395205 TYW1BQ6NUM6 668 aa11.35□□□□□ -0.59
BBS4-202ENST00000395205 BTNL9Q6UXG8 535 aa11.35□□□□□ -0.59
BBS4-202ENST00000395205 MOB2Q70IA6 237 aa11.35□□□□□ -0.59
BBS4-202ENST00000395205 ARMC9Q7Z3E5 817 aa11.35□□□□□ -0.59
BBS4-202ENST00000395205 BLIDQ8IZY5 108 aa11.35□□□□□ -0.59
BBS4-202ENST00000395205 ZNF713Q8N859 430 aaPredicted RBP11.35□□□□□ -0.59
BBS4-202ENST00000395205 MTMR8Q96EF0 704 aa11.35□□□□□ -0.59
BBS4-202ENST00000395205 USP28Q96RU2 1077 aa11.35□□□□□ -0.59
BBS4-202ENST00000395205 ZNF408Q9H9D4 720 aa11.35□□□□□ -0.59
BBS4-202ENST00000395205 C6orf50Q9HD87 102 aa11.35□□□□□ -0.59
BBS4-202ENST00000395205 FEM1BQ9UK73 627 aa11.35□□□□□ -0.59
BBS4-202ENST00000395205 PRR12Q9ULL5 1215 aa11.35□□□□□ -0.59
BBS4-202ENST00000395205 PCDHA4Q9UN74 947 aa11.35□□□□□ -0.59
BBS4-202ENST00000395205 MYH8P13535 1937 aa11.35□□□□□ -0.59
BBS4-202ENST00000395205 DGKZQ13574 1117 aa11.34□□□□□ -0.59
BBS4-202ENST00000395205 QRICH1Q2TAL8 776 aa11.34□□□□□ -0.59
BBS4-202ENST00000395205 GALNT17Q6IS24 598 aa11.34□□□□□ -0.59
BBS4-202ENST00000395205 FAM160B2Q86V87 743 aa11.34□□□□□ -0.59
BBS4-202ENST00000395205 FTOQ9C0B1 505 aaKnown RBP eCLIP11.34□□□□□ -0.59
BBS4-202ENST00000395205 EMILIN3Q9NT22 766 aa11.34□□□□□ -0.59
BBS4-202ENST00000395205 TRAF5O00463 557 aa11.34□□□□□ -0.59
BBS4-202ENST00000395205 WDR46O15213 610 aaKnown RBP11.34□□□□□ -0.59
BBS4-202ENST00000395205 ATP2B1P20020 1258 aa11.34□□□□□ -0.59
BBS4-202ENST00000395205 GNA11P29992 359 aa11.34□□□□□ -0.59
BBS4-202ENST00000395205 MRE11P49959 708 aa11.34□□□□□ -0.59
BBS4-202ENST00000395205 SKOR2Q2VWA4 1001 aaPredicted RBP11.34□□□□□ -0.59
BBS4-202ENST00000395205 ANKRD13AQ8IZ07 590 aa11.34□□□□□ -0.59
BBS4-202ENST00000395205 FAM177A1Q8N128 213 aaPredicted RBP11.34□□□□□ -0.59
BBS4-202ENST00000395205 LEO1Q8WVC0 666 aaPredicted RBP11.34□□□□□ -0.59
BBS4-202ENST00000395205 NMRK2Q9NPI5 230 aa11.34□□□□□ -0.59
BBS4-202ENST00000395205 CLIC4Q9Y696 253 aa11.34□□□□□ -0.59
BBS4-202ENST00000395205 SNCAIPQ9Y6H5 919 aa11.34□□□□□ -0.59
BBS4-202ENST00000395205 DDX49Q9Y6V7 483 aaKnown RBP11.34□□□□□ -0.59
BBS4-202ENST00000395205 GOLGA6L4A6NEF3 574 aa11.33□□□□□ -0.6
BBS4-202ENST00000395205 C19orf81C9J6K1 198 aa11.33□□□□□ -0.6
BBS4-202ENST00000395205 PPP1R11O60927 126 aaPredicted RBP11.33□□□□□ -0.6
BBS4-202ENST00000395205 NPY5RQ15761 445 aa11.33□□□□□ -0.6
BBS4-202ENST00000395205 LDHDQ86WU2 507 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms