RNA–Protein interactions for RNA: ENST00000395134.3

PFDN6-205, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-205ENST00000395134 ZNF165P49910 485 aa10.86□□□□□ -0.67
PFDN6-205ENST00000395134 EMP3P54852 163 aa10.86□□□□□ -0.67
PFDN6-205ENST00000395134 CASP7P55210 303 aa10.86□□□□□ -0.67
PFDN6-205ENST00000395134 SSRP1Q08945 709 aaKnown RBP10.86□□□□□ -0.67
PFDN6-205ENST00000395134 PPP2R5AQ15172 486 aa10.86□□□□□ -0.67
PFDN6-205ENST00000395134 TPTE2Q6XPS3 522 aa10.86□□□□□ -0.67
PFDN6-205ENST00000395134 TTLL7Q6ZT98 887 aa10.86□□□□□ -0.67
PFDN6-205ENST00000395134 ZSWIM2Q8NEG5 633 aa10.86□□□□□ -0.67
PFDN6-205ENST00000395134 ST13P5Q8NFI4 369 aaPredicted RBP10.86□□□□□ -0.67
PFDN6-205ENST00000395134 HSH2DQ96JZ2 352 aa10.86□□□□□ -0.67
PFDN6-205ENST00000395134 CEP44Q9C0F1 390 aa10.86□□□□□ -0.67
PFDN6-205ENST00000395134 ABCB6Q9NP58 842 aa10.86□□□□□ -0.67
PFDN6-205ENST00000395134 ZNF277Q9NRM2 450 aaPredicted RBP10.86□□□□□ -0.67
PFDN6-205ENST00000395134 ZDHHC3Q9NYG2 299 aa10.86□□□□□ -0.67
PFDN6-205ENST00000395134 MCM8Q9UJA3 840 aa10.86□□□□□ -0.67
PFDN6-205ENST00000395134 PDZRN3Q9UPQ7 1066 aa10.86□□□□□ -0.67
PFDN6-205ENST00000395134 PPEF1O14829 653 aaPredicted RBP10.85□□□□□ -0.67
PFDN6-205ENST00000395134 TLR3O15455 904 aaKnown RBP10.85□□□□□ -0.67
PFDN6-205ENST00000395134 EDN3P14138 238 aa10.85□□□□□ -0.67
PFDN6-205ENST00000395134 NPR1P16066 1061 aa10.85□□□□□ -0.67
PFDN6-205ENST00000395134 NFKB2Q00653 900 aa10.85□□□□□ -0.67
PFDN6-205ENST00000395134 HDAC1Q13547 482 aaPredicted RBP10.85□□□□□ -0.67
PFDN6-205ENST00000395134 PEAR1Q5VY43 1037 aaPredicted RBP10.85□□□□□ -0.67
PFDN6-205ENST00000395134 THSD4Q6ZMP0 1018 aa10.85□□□□□ -0.67
PFDN6-205ENST00000395134 BTLAQ7Z6A9 289 aa10.85□□□□□ -0.67
PFDN6-205ENST00000395134 NIM1KQ8IY84 436 aa10.85□□□□□ -0.67
PFDN6-205ENST00000395134 ZNF669Q96BR6 464 aaPredicted RBP10.85□□□□□ -0.67
PFDN6-205ENST00000395134 MAF1Q9H063 256 aa10.85□□□□□ -0.67
PFDN6-205ENST00000395134 ZFYVE1Q9HBF4 777 aa10.85□□□□□ -0.67
PFDN6-205ENST00000395134 LATS2Q9NRM7 1088 aa10.85□□□□□ -0.67
PFDN6-205ENST00000395134 ZNF541Q9H0D2 1346 aa10.84□□□□□ -0.67
PFDN6-205ENST00000395134 FAM205CA6NFA0 338 aa10.84□□□□□ -0.67
PFDN6-205ENST00000395134 HTATSF1O43719 755 aaKnown RBP10.84□□□□□ -0.67
PFDN6-205ENST00000395134 ANXA1P04083 346 aa10.84□□□□□ -0.67
PFDN6-205ENST00000395134 KRT18P05783 430 aaKnown RBP10.84□□□□□ -0.67
PFDN6-205ENST00000395134 SOX5P35711 763 aa10.84□□□□□ -0.67
PFDN6-205ENST00000395134 PLA2G4AP47712 749 aa10.84□□□□□ -0.67
PFDN6-205ENST00000395134 CCDC93Q567U6 631 aa10.84□□□□□ -0.67
PFDN6-205ENST00000395134 TTBK2Q6IQ55 1244 aa10.84□□□□□ -0.67
PFDN6-205ENST00000395134 CLEC4GQ6UXB4 293 aa10.84□□□□□ -0.67
PFDN6-205ENST00000395134 KIF6Q6ZMV9 814 aa10.84□□□□□ -0.67
PFDN6-205ENST00000395134 TRIM42Q8IWZ5 723 aa10.84□□□□□ -0.67
PFDN6-205ENST00000395134 RBBP8NLQ8NC74 664 aaPredicted RBP10.84□□□□□ -0.67
PFDN6-205ENST00000395134 FBXO27Q8NI29 283 aa10.84□□□□□ -0.67
PFDN6-205ENST00000395134 SLC39A13Q96H72 371 aa10.84□□□□□ -0.67
PFDN6-205ENST00000395134 PLEKHF1Q96S99 279 aa10.84□□□□□ -0.67
PFDN6-205ENST00000395134 BSDC1Q9NW68 430 aaPredicted RBP10.84□□□□□ -0.67
PFDN6-205ENST00000395134 COL4A5P29400 1685 aa10.84□□□□□ -0.67
PFDN6-205ENST00000395134 LTBP3Q9NS15 1303 aa10.84□□□□□ -0.67
PFDN6-205ENST00000395134 TRPM7Q96QT4 1865 aa10.83□□□□□ -0.68
PFDN6-205ENST00000395134 TCERG1O14776 1098 aaKnown RBP10.83□□□□□ -0.68
PFDN6-205ENST00000395134 SIAH2O43255 324 aa10.83□□□□□ -0.68
PFDN6-205ENST00000395134 DDAH1O94760 285 aa10.83□□□□□ -0.68
PFDN6-205ENST00000395134 EIF4A1P60842 406 aaKnown RBP10.83□□□□□ -0.68
PFDN6-205ENST00000395134 RPS26P62854 115 aaKnown RBP10.83□□□□□ -0.68
PFDN6-205ENST00000395134 CT47A1Q5JQC4 288 aaPredicted RBP10.83□□□□□ -0.68
PFDN6-205ENST00000395134 GNASQ5JWF2 1037 aa10.83□□□□□ -0.68
PFDN6-205ENST00000395134 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.83□□□□□ -0.68
PFDN6-205ENST00000395134 CCDC84Q86UT8 332 aaPredicted RBP10.83□□□□□ -0.68
PFDN6-205ENST00000395134 AIDAQ96BJ3 306 aa10.83□□□□□ -0.68
PFDN6-205ENST00000395134 TSPYL4Q9UJ04 414 aa10.83□□□□□ -0.68
PFDN6-205ENST00000395134 MAP3K15Q6ZN16 1313 aa10.83□□□□□ -0.68
PFDN6-205ENST00000395134 UBN2Q6ZU65 1347 aa10.83□□□□□ -0.68
PFDN6-205ENST00000395134 A0A087X0B3 334 aa10.82□□□□□ -0.68
PFDN6-205ENST00000395134 XYLBO75191 536 aa10.82□□□□□ -0.68
PFDN6-205ENST00000395134 F13A1P00488 732 aa10.82□□□□□ -0.68
PFDN6-205ENST00000395134 IMPDH2P12268 514 aa10.82□□□□□ -0.68
PFDN6-205ENST00000395134 EIF2S2P20042 333 aaKnown RBP10.82□□□□□ -0.68
PFDN6-205ENST00000395134 CWF19L2Q2TBE0 894 aaKnown RBP10.82□□□□□ -0.68
PFDN6-205ENST00000395134 TMEM67Q5HYA8 995 aa10.82□□□□□ -0.68
PFDN6-205ENST00000395134 TTC39BQ5VTQ0 682 aaPredicted RBP10.82□□□□□ -0.68
PFDN6-205ENST00000395134 C11orf96Q7Z7L8 435 aa10.82□□□□□ -0.68
PFDN6-205ENST00000395134 PLD4Q96BZ4 506 aa10.82□□□□□ -0.68
PFDN6-205ENST00000395134 LIN7BQ9HAP6 207 aa10.82□□□□□ -0.68
PFDN6-205ENST00000395134 ZNRF3Q9ULT6 936 aa10.82□□□□□ -0.68
PFDN6-205ENST00000395134 POLR2AP24928 1970 aaKnown RBP10.82□□□□□ -0.68
PFDN6-205ENST00000395134 LTBP1Q14766 1721 aa10.81□□□□□ -0.68
PFDN6-205ENST00000395134 LDHAP00338 332 aaKnown RBP10.81□□□□□ -0.68
PFDN6-205ENST00000395134 EGFRP00533 1210 aa10.81□□□□□ -0.68
PFDN6-205ENST00000395134 MPP2Q14168 576 aa10.81□□□□□ -0.68
PFDN6-205ENST00000395134 HLTFQ14527 1009 aaKnown RBP eCLIP10.81□□□□□ -0.684e-6■■■□□ 18.1
PFDN6-205ENST00000395134 PROSER3Q2NL68 480 aa10.81□□□□□ -0.68
PFDN6-205ENST00000395134 PERM1Q5SV97 790 aa10.81□□□□□ -0.68
PFDN6-205ENST00000395134 COL13A1Q5TAT6 717 aaPredicted RBP10.81□□□□□ -0.68
PFDN6-205ENST00000395134 BNC2Q6ZN30 1099 aaPredicted RBP10.81□□□□□ -0.68
PFDN6-205ENST00000395134 REXO1Q8N1G1 1221 aaKnown RBP10.81□□□□□ -0.68
PFDN6-205ENST00000395134 SAMD3Q8N6K7 520 aa10.81□□□□□ -0.68
PFDN6-205ENST00000395134 PNISRQ8TF01 805 aaKnown RBP10.81□□□□□ -0.68
PFDN6-205ENST00000395134 GATAD2BQ8WXI9 593 aa10.81□□□□□ -0.68
PFDN6-205ENST00000395134 RPGRQ92834 1020 aaKnown RBP10.81□□□□□ -0.68
PFDN6-205ENST00000395134 IL17RAQ96F46 866 aa10.81□□□□□ -0.68
PFDN6-205ENST00000395134 ARNT2Q9HBZ2 717 aa10.81□□□□□ -0.68
PFDN6-205ENST00000395134 DDX60Q8IY21 1712 aaKnown RBP10.81□□□□□ -0.68
PFDN6-205ENST00000395134 ADAMTSL1Q8N6G6 1762 aa10.8□□□□□ -0.68
PFDN6-205ENST00000395134 EPB42P16452 691 aa10.8□□□□□ -0.68
PFDN6-205ENST00000395134 RIPK4P57078 832 aa10.8□□□□□ -0.68
PFDN6-205ENST00000395134 MCL1Q07820 350 aa10.8□□□□□ -0.68
PFDN6-205ENST00000395134 LRRC41Q15345 812 aa10.8□□□□□ -0.68
PFDN6-205ENST00000395134 PPP2R5EQ16537 467 aa10.8□□□□□ -0.68
PFDN6-205ENST00000395134 C4orf17Q53FE4 359 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms