RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 COG1Q8WTW3 980 aa16.06■□□□□ 0.16
CLIP2-203ENST00000395060 PPM1EQ8WY54 764 aa16.06■□□□□ 0.16
CLIP2-203ENST00000395060 HPS3Q969F9 1004 aa16.06■□□□□ 0.16
CLIP2-203ENST00000395060 CNNM2Q9H8M5 875 aa16.06■□□□□ 0.16
CLIP2-203ENST00000395060 STK36Q9NRP7 1315 aa16.06■□□□□ 0.16
CLIP2-203ENST00000395060 STARD3NLO95772 234 aa16.05■□□□□ 0.16
CLIP2-203ENST00000395060 PCCAP05165 728 aaPredicted RBP16.05■□□□□ 0.16
CLIP2-203ENST00000395060 NKX1-1Q15270 411 aaPredicted RBP16.05■□□□□ 0.16
CLIP2-203ENST00000395060 IL17AQ16552 155 aa16.05■□□□□ 0.16
CLIP2-203ENST00000395060 IFIT1BQ5T764 474 aaKnown RBP16.05■□□□□ 0.16
CLIP2-203ENST00000395060 MKRN1Q9UHC7 482 aaKnown RBP16.05■□□□□ 0.16
CLIP2-203ENST00000395060 DMGDHQ9UI17 866 aaKnown RBP16.05■□□□□ 0.16
CLIP2-203ENST00000395060 JAG2Q9Y219 1238 aa16.05■□□□□ 0.16
CLIP2-203ENST00000395060 PRPF6O94906 941 aaKnown RBP16.05■□□□□ 0.16
CLIP2-203ENST00000395060 RPN1P04843 607 aaKnown RBP16.05■□□□□ 0.16
CLIP2-203ENST00000395060 GNGT1P63211 74 aa16.05■□□□□ 0.16
CLIP2-203ENST00000395060 WDR59Q6PJI9 974 aa16.05■□□□□ 0.16
CLIP2-203ENST00000395060 GPKOWQ92917 476 aaPredicted RBP eCLIP16.05■□□□□ 0.16
CLIP2-203ENST00000395060 MLXIPQ9HAP2 919 aa16.05■□□□□ 0.16
CLIP2-203ENST00000395060 ADAMTS7Q9UKP4 1686 aa16.05■□□□□ 0.16
CLIP2-203ENST00000395060 CDHR2Q9BYE9 1310 aa16.05■□□□□ 0.16
CLIP2-203ENST00000395060 EXOC5O00471 708 aa16.05■□□□□ 0.16
CLIP2-203ENST00000395060 NCK2O43639 380 aa16.05■□□□□ 0.16
CLIP2-203ENST00000395060 IPO7O95373 1038 aaKnown RBP16.05■□□□□ 0.16
CLIP2-203ENST00000395060 STAT6P42226 847 aa16.05■□□□□ 0.16
CLIP2-203ENST00000395060 DYNLL1P63167 89 aaKnown RBP16.05■□□□□ 0.16
CLIP2-203ENST00000395060 ENOX2Q16206 610 aaKnown RBP16.05■□□□□ 0.16
CLIP2-203ENST00000395060 ACSBG1Q96GR2 724 aa16.05■□□□□ 0.16
CLIP2-203ENST00000395060 LRRC1Q9BTT6 524 aa16.05■□□□□ 0.16
CLIP2-203ENST00000395060 ZBTB1Q9Y2K1 713 aa16.05■□□□□ 0.16
CLIP2-203ENST00000395060 KDM4FA0A1W2PPD8 638 aa16.04■□□□□ 0.16
CLIP2-203ENST00000395060 AGPSO00116 658 aa16.04■□□□□ 0.16
CLIP2-203ENST00000395060 NAP1L1P55209 391 aaKnown RBP16.04■□□□□ 0.16
CLIP2-203ENST00000395060 ENAHQ8N8S7 591 aaPredicted RBP16.04■□□□□ 0.16
CLIP2-203ENST00000395060 SLC4A9Q96Q91 983 aa16.04■□□□□ 0.16
CLIP2-203ENST00000395060 DEF6Q9H4E7 631 aa16.04■□□□□ 0.16
CLIP2-203ENST00000395060 LRWD1Q9UFC0 647 aa16.04■□□□□ 0.16
CLIP2-203ENST00000395060 MYO5AQ9Y4I1 1855 aaKnown RBP16.04■□□□□ 0.16
CLIP2-203ENST00000395060 ESYT3A0FGR9 886 aa16.04■□□□□ 0.16
CLIP2-203ENST00000395060 PDCLQ13371 301 aa16.04■□□□□ 0.16
CLIP2-203ENST00000395060 PTPROQ16827 1216 aa16.04■□□□□ 0.16
CLIP2-203ENST00000395060 MAP9Q49MG5 647 aa16.04■□□□□ 0.16
CLIP2-203ENST00000395060 SH3RF1Q7Z6J0 888 aa16.04■□□□□ 0.16
CLIP2-203ENST00000395060 KAT2BQ92831 832 aa16.04■□□□□ 0.16
CLIP2-203ENST00000395060 CSF1RP07333 972 aa16.03■□□□□ 0.16
CLIP2-203ENST00000395060 MNAT1P51948 309 aa16.03■□□□□ 0.16
CLIP2-203ENST00000395060 TADA2BQ86TJ2 420 aa16.03■□□□□ 0.16
CLIP2-203ENST00000395060 NLRP10Q86W26 655 aa16.03■□□□□ 0.16
CLIP2-203ENST00000395060 IRF2BP1Q8IU81 584 aa16.03■□□□□ 0.16
CLIP2-203ENST00000395060 MB21D1Q8N884 522 aa16.03■□□□□ 0.16
CLIP2-203ENST00000395060 CCDC51Q96ER9 411 aa16.03■□□□□ 0.16
CLIP2-203ENST00000395060 LIMA1Q9UHB6 759 aaKnown RBP16.03■□□□□ 0.16
CLIP2-203ENST00000395060 TYW1BQ6NUM6 668 aa16.03■□□□□ 0.16
CLIP2-203ENST00000395060 WDR93Q6P2C0 686 aa16.03■□□□□ 0.16
CLIP2-203ENST00000395060 CENPHQ9H3R5 247 aa16.03■□□□□ 0.16
CLIP2-203ENST00000395060 BRMS1Q9HCU9 246 aa16.03■□□□□ 0.16
CLIP2-203ENST00000395060 FAM169AQ9Y6X4 670 aa16.03■□□□□ 0.16
CLIP2-203ENST00000395060 MOCS3O95396 460 aa16.03■□□□□ 0.16
CLIP2-203ENST00000395060 IRAK1P51617 712 aa16.03■□□□□ 0.16
CLIP2-203ENST00000395060 SF3A3Q12874 501 aaKnown RBP eCLIP16.03■□□□□ 0.16
CLIP2-203ENST00000395060 NFRKBQ6P4R8 1299 aa16.03■□□□□ 0.16
CLIP2-203ENST00000395060 ARL8AQ96BM9 186 aa16.03■□□□□ 0.16
CLIP2-203ENST00000395060 NHEJ1Q9H9Q4 299 aaPredicted RBP16.03■□□□□ 0.16
CLIP2-203ENST00000395060 MAGEC2Q9UBF1 373 aaPredicted RBP16.03■□□□□ 0.16
CLIP2-203ENST00000395060 RWDD2AQ9UIY3 292 aa16.03■□□□□ 0.16
CLIP2-203ENST00000395060 KRT86O43790 486 aa16.02■□□□□ 0.16
CLIP2-203ENST00000395060 ERLIN2O94905 339 aa16.02■□□□□ 0.16
CLIP2-203ENST00000395060 TBC1D8BQ0IIM8 1120 aa16.02■□□□□ 0.16
CLIP2-203ENST00000395060 CATIPQ7Z7H3 387 aa16.02■□□□□ 0.16
CLIP2-203ENST00000395060 VGLL2Q8N8G2 317 aa16.02■□□□□ 0.16
CLIP2-203ENST00000395060 FAM207AQ9NSI2 230 aaPredicted RBP16.02■□□□□ 0.16
CLIP2-203ENST00000395060 EBAG9O00559 213 aa16.02■□□□□ 0.15
CLIP2-203ENST00000395060 PUM3Q15397 648 aaKnown RBP16.02■□□□□ 0.15
CLIP2-203ENST00000395060 CCDC178Q5BJE1 867 aa16.02■□□□□ 0.15
CLIP2-203ENST00000395060 PAXIP1Q6ZW49 1069 aaPredicted RBP16.02■□□□□ 0.15
CLIP2-203ENST00000395060 ANKRD18AQ8IVF6 992 aa16.02■□□□□ 0.15
CLIP2-203ENST00000395060 PHF20Q9BVI0 1012 aa16.02■□□□□ 0.15
CLIP2-203ENST00000395060 HAUS4Q9H6D7 363 aa16.02■□□□□ 0.15
CLIP2-203ENST00000395060 ZSCAN5CA6NGD5 496 aaPredicted RBP16.01■□□□□ 0.15
CLIP2-203ENST00000395060 MTIF2P46199 727 aaKnown RBP16.01■□□□□ 0.15
CLIP2-203ENST00000395060 CCNI2Q6ZMN8 369 aaPredicted RBP16.01■□□□□ 0.15
CLIP2-203ENST00000395060 IFT81Q8WYA0 676 aa16.01■□□□□ 0.15
CLIP2-203ENST00000395060 CAPN6Q9Y6Q1 641 aa16.01■□□□□ 0.15
CLIP2-203ENST00000395060 BUB1O43683 1085 aa16.01■□□□□ 0.15
CLIP2-203ENST00000395060 KRT14P02533 472 aa16.01■□□□□ 0.15
CLIP2-203ENST00000395060 TMC4Q7Z404 712 aa16.01■□□□□ 0.15
CLIP2-203ENST00000395060 PROCA1Q8NCQ7 364 aaPredicted RBP16.01■□□□□ 0.15
CLIP2-203ENST00000395060 STAG1Q8WVM7 1258 aa16.01■□□□□ 0.15
CLIP2-203ENST00000395060 LPIN2Q92539 896 aa16.01■□□□□ 0.15
CLIP2-203ENST00000395060 ESR2Q92731 530 aa16.01■□□□□ 0.15
CLIP2-203ENST00000395060 RUFY1Q96T51 708 aa16.01■□□□□ 0.15
CLIP2-203ENST00000395060 CAPS2Q9BXY5 557 aa16.01■□□□□ 0.15
CLIP2-203ENST00000395060 ZNHIT6Q9NWK9 470 aaKnown RBP16.01■□□□□ 0.15
CLIP2-203ENST00000395060 H0YHG0 523 aa16.01■□□□□ 0.15
CLIP2-203ENST00000395060 TUBB2AQ13885 445 aa16.01■□□□□ 0.15
CLIP2-203ENST00000395060 PDXDC2PQ6P474 469 aa16.01■□□□□ 0.15
CLIP2-203ENST00000395060 CSGALNACT2Q8N6G5 542 aa16.01■□□□□ 0.15
CLIP2-203ENST00000395060 CTCFLQ8NI51 663 aaPredicted RBP16.01■□□□□ 0.15
CLIP2-203ENST00000395060 FERMT2Q96AC1 680 aa16.01■□□□□ 0.15
CLIP2-203ENST00000395060 MS4A14Q96JA4 679 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms