RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 NEDD1Q8NHV4 660 aa11.68□□□□□ -0.54
HIF1A-203ENST00000394997 UBXN4Q92575 508 aa11.68□□□□□ -0.54
HIF1A-203ENST00000394997 MTMR9Q96QG7 549 aa11.68□□□□□ -0.54
HIF1A-203ENST00000394997 KBTBD4Q9NVX7 518 aa11.68□□□□□ -0.54
HIF1A-203ENST00000394997 LOXHD1Q8IVV2 1947 aa11.68□□□□□ -0.54
HIF1A-203ENST00000394997 ATRNL1Q5VV63 1379 aa11.68□□□□□ -0.54
HIF1A-203ENST00000394997 NEMFO60524 1076 aa11.67□□□□□ -0.54
HIF1A-203ENST00000394997 SRGNP10124 158 aa11.67□□□□□ -0.54
HIF1A-203ENST00000394997 SKILP12757 684 aa11.67□□□□□ -0.54
HIF1A-203ENST00000394997 SMARCA1P28370 1054 aa11.67□□□□□ -0.54
HIF1A-203ENST00000394997 CRNKL1Q9BZJ0 848 aaKnown RBP11.67□□□□□ -0.54
HIF1A-203ENST00000394997 TTYH3Q9C0H2 523 aa11.67□□□□□ -0.54
HIF1A-203ENST00000394997 ZNF446Q9NWS9 450 aa11.67□□□□□ -0.54
HIF1A-203ENST00000394997 PCDHA4Q9UN74 947 aa11.67□□□□□ -0.54
HIF1A-203ENST00000394997 DAGLAQ9Y4D2 1042 aa11.67□□□□□ -0.54
HIF1A-203ENST00000394997 SIP14410 1827 aa11.67□□□□□ -0.54
HIF1A-203ENST00000394997 SMTNL1A8MU46 457 aa11.67□□□□□ -0.54
HIF1A-203ENST00000394997 TEX33O43247 280 aa11.67□□□□□ -0.54
HIF1A-203ENST00000394997 SERPINB2P05120 415 aa11.67□□□□□ -0.54
HIF1A-203ENST00000394997 LMOD1P29536 600 aaPredicted RBP11.67□□□□□ -0.54
HIF1A-203ENST00000394997 PAXIP1Q6ZW49 1069 aaPredicted RBP11.67□□□□□ -0.54
HIF1A-203ENST00000394997 WDR66Q8TBY9 1149 aa11.67□□□□□ -0.54
HIF1A-203ENST00000394997 A0A0G2JMZ2 1700 aa11.67□□□□□ -0.54
HIF1A-203ENST00000394997 LRRC37A2A6NM11 1700 aa11.67□□□□□ -0.54
HIF1A-203ENST00000394997 ZPR1O75312 459 aa11.67□□□□□ -0.54
HIF1A-203ENST00000394997 ERCC5P28715 1186 aaPredicted RBP11.67□□□□□ -0.54
HIF1A-203ENST00000394997 SH3BP5LQ7L8J4 393 aa11.67□□□□□ -0.54
HIF1A-203ENST00000394997 ZNF507Q8TCN5 953 aa11.67□□□□□ -0.54
HIF1A-203ENST00000394997 FERMT2Q96AC1 680 aa11.67□□□□□ -0.54
HIF1A-203ENST00000394997 UBAC1Q9BSL1 405 aa11.67□□□□□ -0.54
HIF1A-203ENST00000394997 CDK8P49336 464 aa11.67□□□□□ -0.54
HIF1A-203ENST00000394997 TFAP4Q01664 338 aa11.67□□□□□ -0.54
HIF1A-203ENST00000394997 ELF2Q15723 593 aa11.67□□□□□ -0.54
HIF1A-203ENST00000394997 SHROOM1Q2M3G4 852 aaPredicted RBP11.67□□□□□ -0.54
HIF1A-203ENST00000394997 COBLL1Q53SF7 1204 aa11.67□□□□□ -0.54
HIF1A-203ENST00000394997 ARL6IP4Q66PJ3 421 aaKnown RBP11.67□□□□□ -0.54
HIF1A-203ENST00000394997 GOLGA6L1Q8N7Z2 621 aa11.67□□□□□ -0.54
HIF1A-203ENST00000394997 GPKOWQ92917 476 aaPredicted RBP eCLIP11.67□□□□□ -0.54
HIF1A-203ENST00000394997 SHMT1P34896 483 aa11.66□□□□□ -0.54
HIF1A-203ENST00000394997 APOBEC3HQ6NTF7 200 aaKnown RBP11.66□□□□□ -0.54
HIF1A-203ENST00000394997 TMCO3Q6UWJ1 677 aa11.66□□□□□ -0.54
HIF1A-203ENST00000394997 CNBD1Q8NA66 436 aa11.66□□□□□ -0.54
HIF1A-203ENST00000394997 PNMA1Q8ND90 353 aa11.66□□□□□ -0.54
HIF1A-203ENST00000394997 PCDHAC2Q9Y5I4 1007 aa11.66□□□□□ -0.54
HIF1A-203ENST00000394997 ABL1P00519 1130 aa11.66□□□□□ -0.54
HIF1A-203ENST00000394997 TTC38Q5R3I4 469 aa11.66□□□□□ -0.54
HIF1A-203ENST00000394997 IGSF22Q8N9C0 903 aa11.66□□□□□ -0.54
HIF1A-203ENST00000394997 COL11A1P12107 1806 aaPredicted RBP11.66□□□□□ -0.54
HIF1A-203ENST00000394997 MYO3BQ8WXR4 1341 aa11.66□□□□□ -0.54
HIF1A-203ENST00000394997 CATIPQ7Z7H3 387 aa11.66□□□□□ -0.54
HIF1A-203ENST00000394997 TRMT44Q8IYL2 757 aaKnown RBP11.66□□□□□ -0.54
HIF1A-203ENST00000394997 PDILTQ8N807 584 aa11.66□□□□□ -0.54
HIF1A-203ENST00000394997 MLKLQ8NB16 471 aa11.66□□□□□ -0.54
HIF1A-203ENST00000394997 RASGRP4Q8TDF6 673 aa11.66□□□□□ -0.54
HIF1A-203ENST00000394997 NUP133Q8WUM0 1156 aa11.66□□□□□ -0.54
HIF1A-203ENST00000394997 CPVLQ9H3G5 476 aa11.66□□□□□ -0.54
HIF1A-203ENST00000394997 URI1O94763 535 aaPredicted RBP11.65□□□□□ -0.54
HIF1A-203ENST00000394997 BTDP43251 543 aa11.65□□□□□ -0.54
HIF1A-203ENST00000394997 JAG1P78504 1218 aa11.65□□□□□ -0.54
HIF1A-203ENST00000394997 SART3Q15020 963 aaKnown RBP11.65□□□□□ -0.54
HIF1A-203ENST00000394997 SP8Q8IXZ3 490 aa11.65□□□□□ -0.54
HIF1A-203ENST00000394997 TGFBRAP1Q8WUH2 860 aa11.65□□□□□ -0.54
HIF1A-203ENST00000394997 KCNQ5Q9NR82 932 aa11.65□□□□□ -0.54
HIF1A-203ENST00000394997 PARP3Q9Y6F1 533 aa11.65□□□□□ -0.54
HIF1A-203ENST00000394997 PCNTO95613 3336 aa11.65□□□□□ -0.54
HIF1A-203ENST00000394997 ITIH6Q6UXX5 1313 aa11.65□□□□□ -0.54
HIF1A-203ENST00000394997 PP2D1A8MPX8 630 aa11.65□□□□□ -0.54
HIF1A-203ENST00000394997 CNNM4Q6P4Q7 775 aa11.65□□□□□ -0.54
HIF1A-203ENST00000394997 C10orf67Q8IYJ2 551 aa11.65□□□□□ -0.54
HIF1A-203ENST00000394997 SMYD4Q8IYR2 804 aaPredicted RBP11.65□□□□□ -0.54
HIF1A-203ENST00000394997 CNNM3Q8NE01 707 aa11.65□□□□□ -0.54
HIF1A-203ENST00000394997 LIMA1Q9UHB6 759 aaKnown RBP11.65□□□□□ -0.54
HIF1A-203ENST00000394997 ATP6V0A2Q9Y487 856 aa11.65□□□□□ -0.54
HIF1A-203ENST00000394997 GYPCP04921 128 aa11.65□□□□□ -0.55
HIF1A-203ENST00000394997 PDHBP11177 359 aa11.65□□□□□ -0.55
HIF1A-203ENST00000394997 DPY19L2P1Q6NXN4 242 aa11.65□□□□□ -0.55
HIF1A-203ENST00000394997 COL23A1Q86Y22 540 aaPredicted RBP11.65□□□□□ -0.55
HIF1A-203ENST00000394997 ZFPM1Q8IX07 1006 aa11.65□□□□□ -0.55
HIF1A-203ENST00000394997 TRIM22Q8IYM9 498 aa11.65□□□□□ -0.55
HIF1A-203ENST00000394997 JMYQ8N9B5 988 aa11.65□□□□□ -0.55
HIF1A-203ENST00000394997 CEP95Q96GE4 821 aa11.65□□□□□ -0.55
HIF1A-203ENST00000394997 GSDMAQ96QA5 445 aa11.65□□□□□ -0.55
HIF1A-203ENST00000394997 MCM9Q9NXL9 1143 aa11.65□□□□□ -0.55
HIF1A-203ENST00000394997 PGAP2Q9UHJ9 254 aa11.65□□□□□ -0.55
HIF1A-203ENST00000394997 ATF5Q9Y2D1 282 aaPredicted RBP11.65□□□□□ -0.55
HIF1A-203ENST00000394997 PAXBP1Q9Y5B6 917 aa11.65□□□□□ -0.55
HIF1A-203ENST00000394997 TRIM75PA6NK02 468 aa11.64□□□□□ -0.55
HIF1A-203ENST00000394997 LDHBP07195 334 aaKnown RBP11.64□□□□□ -0.55
HIF1A-203ENST00000394997 ATP2B4P23634 1241 aa11.64□□□□□ -0.55
HIF1A-203ENST00000394997 PRPHP41219 470 aa11.64□□□□□ -0.55
HIF1A-203ENST00000394997 GSDMDP57764 484 aa11.64□□□□□ -0.55
HIF1A-203ENST00000394997 ZNF174Q15697 407 aa11.64□□□□□ -0.55
HIF1A-203ENST00000394997 TOGARAM2Q6ZUX3 1019 aa11.64□□□□□ -0.55
HIF1A-203ENST00000394997 MXD3Q9BW11 206 aa11.64□□□□□ -0.55
HIF1A-203ENST00000394997 BLIDQ8IZY5 108 aa11.64□□□□□ -0.55
HIF1A-203ENST00000394997 DUSP9Q99956 384 aaKnown RBP11.64□□□□□ -0.55
HIF1A-203ENST00000394997 UBXN6Q9BZV1 441 aa11.64□□□□□ -0.55
HIF1A-203ENST00000394997 NAT10Q9H0A0 1025 aaKnown RBP11.64□□□□□ -0.55
HIF1A-203ENST00000394997 TOMM22Q9NS69 142 aa11.64□□□□□ -0.55
HIF1A-203ENST00000394997 REXO2Q9Y3B8 237 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms