RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 UTP14CQ5TAP6 766 aaKnown RBP15.85■□□□□ 0.13
SNCA-204ENST00000394989 ARL6IP4Q66PJ3 421 aaKnown RBP15.85■□□□□ 0.13
SNCA-204ENST00000394989 VSTM4Q8IW00 320 aa15.85■□□□□ 0.13
SNCA-204ENST00000394989 CCDC150Q8NCX0 1101 aa15.85■□□□□ 0.13
SNCA-204ENST00000394989 LZTS2Q9BRK4 669 aa15.85■□□□□ 0.13
SNCA-204ENST00000394989 KCND1Q9NSA2 647 aa15.85■□□□□ 0.13
SNCA-204ENST00000394989 SAMSN1Q9NSI8 373 aaKnown RBP15.85■□□□□ 0.13
SNCA-204ENST00000394989 TTF2Q9UNY4 1162 aaKnown RBP15.85■□□□□ 0.13
SNCA-204ENST00000394989 SUGT1Q9Y2Z0 365 aa15.85■□□□□ 0.13
SNCA-204ENST00000394989 PARP1P09874 1014 aaKnown RBP15.85■□□□□ 0.13
SNCA-204ENST00000394989 TOP1P11387 765 aaKnown RBP15.85■□□□□ 0.13
SNCA-204ENST00000394989 INF2Q27J81 1249 aa15.85■□□□□ 0.13
SNCA-204ENST00000394989 DPP8Q6V1X1 898 aaPredicted RBP15.85■□□□□ 0.13
SNCA-204ENST00000394989 NYAP1Q6ZVC0 841 aa15.85■□□□□ 0.13
SNCA-204ENST00000394989 TMEM60Q9H2L4 133 aa15.85■□□□□ 0.13
SNCA-204ENST00000394989 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.85■□□□□ 0.13
SNCA-204ENST00000394989 V9GYY5 206 aaPredicted RBP15.85■□□□□ 0.13
SNCA-204ENST00000394989 PLIN4Q96Q06 1357 aa15.84■□□□□ 0.13
SNCA-204ENST00000394989 APBA3O96018 575 aa15.84■□□□□ 0.13
SNCA-204ENST00000394989 SFPQP23246 707 aaKnown RBP eCLIP15.84■□□□□ 0.13
SNCA-204ENST00000394989 SMYD4Q8IYR2 804 aaPredicted RBP15.84■□□□□ 0.13
SNCA-204ENST00000394989 CCAR2Q8N163 923 aaKnown RBP15.84■□□□□ 0.13
SNCA-204ENST00000394989 CCDC148Q8NFR7 591 aa15.84■□□□□ 0.13
SNCA-204ENST00000394989 TRERF1Q96PN7 1200 aa15.84■□□□□ 0.13
SNCA-204ENST00000394989 ZMYND12Q9H0C1 365 aa15.84■□□□□ 0.13
SNCA-204ENST00000394989 DACH1Q9UI36 760 aa15.84■□□□□ 0.13
SNCA-204ENST00000394989 USP17L5A8MUK1 530 aa15.84■□□□□ 0.13
SNCA-204ENST00000394989 CBFA2T2O43439 604 aa15.84■□□□□ 0.13
SNCA-204ENST00000394989 SCNN1DP51172 638 aa15.84■□□□□ 0.13
SNCA-204ENST00000394989 CUL4BQ13620 913 aa15.84■□□□□ 0.13
SNCA-204ENST00000394989 E4F1Q66K89 784 aaPredicted RBP15.84■□□□□ 0.13
SNCA-204ENST00000394989 GSDMAQ96QA5 445 aa15.84■□□□□ 0.13
SNCA-204ENST00000394989 KCNQ5Q9NR82 932 aa15.84■□□□□ 0.13
SNCA-204ENST00000394989 CCDC194A0A1B0GVG4 234 aa15.83■□□□□ 0.13
SNCA-204ENST00000394989 ERCC5P28715 1186 aaPredicted RBP15.83■□□□□ 0.13
SNCA-204ENST00000394989 GALNT17Q6IS24 598 aa15.83■□□□□ 0.13
SNCA-204ENST00000394989 HOMER1Q86YM7 354 aa15.83■□□□□ 0.13
SNCA-204ENST00000394989 CLEC10AQ8IUN9 316 aa15.83■□□□□ 0.13
SNCA-204ENST00000394989 PLCD3Q8N3E9 789 aa15.83■□□□□ 0.13
SNCA-204ENST00000394989 BLZF1Q9H2G9 400 aa15.83■□□□□ 0.13
SNCA-204ENST00000394989 TRMT1Q9NXH9 659 aaKnown RBP15.83■□□□□ 0.13
SNCA-204ENST00000394989 MTMR4Q9NYA4 1195 aa15.83■□□□□ 0.13
SNCA-204ENST00000394989 MYH8P13535 1937 aa15.83■□□□□ 0.13
SNCA-204ENST00000394989 AKR1B1P15121 316 aa15.83■□□□□ 0.12
SNCA-204ENST00000394989 ALDH1B1P30837 517 aa15.83■□□□□ 0.12
SNCA-204ENST00000394989 MSL1Q68DK7 614 aa15.83■□□□□ 0.12
SNCA-204ENST00000394989 IQUBQ8NA54 791 aa15.83■□□□□ 0.12
SNCA-204ENST00000394989 PPP1R3GB7ZBB8 358 aa15.83■□□□□ 0.12
SNCA-204ENST00000394989 PDHBP11177 359 aa15.83■□□□□ 0.12
SNCA-204ENST00000394989 LONP1P36776 959 aaKnown RBP15.83■□□□□ 0.12
SNCA-204ENST00000394989 IGKV6D-41A0A0C4DH26 115 aa15.82■□□□□ 0.12
SNCA-204ENST00000394989 PDE6BP35913 854 aa15.82■□□□□ 0.12
SNCA-204ENST00000394989 GOLGA8FQ08AF8 430 aa15.82■□□□□ 0.12
SNCA-204ENST00000394989 GOLGA8DPQ0D2H9 430 aa15.82■□□□□ 0.12
SNCA-204ENST00000394989 PIGSQ96S52 555 aa15.82■□□□□ 0.12
SNCA-204ENST00000394989 UBA5Q9GZZ9 404 aa15.82■□□□□ 0.12
SNCA-204ENST00000394989 ERICH4A6NGS2 130 aa15.82■□□□□ 0.12
SNCA-204ENST00000394989 PP2D1A8MPX8 630 aa15.82■□□□□ 0.12
SNCA-204ENST00000394989 SLURP2P0DP57 97 aa15.82■□□□□ 0.12
SNCA-204ENST00000394989 APOBEC3HQ6NTF7 200 aaKnown RBP15.82■□□□□ 0.12
SNCA-204ENST00000394989 CDC42EP5Q6NZY7 148 aa15.82■□□□□ 0.12
SNCA-204ENST00000394989 MASTLQ96GX5 879 aa15.82■□□□□ 0.12
SNCA-204ENST00000394989 CCDC34Q96HJ3 373 aa15.82■□□□□ 0.12
SNCA-204ENST00000394989 GTPBP4Q9BZE4 634 aaKnown RBP15.82■□□□□ 0.12
SNCA-204ENST00000394989 USP40Q9NVE5 1235 aa15.82■□□□□ 0.12
SNCA-204ENST00000394989 NAPAP54920 295 aa15.81■□□□□ 0.12
SNCA-204ENST00000394989 KARSQ15046 597 aaKnown RBP15.81■□□□□ 0.12
SNCA-204ENST00000394989 APTXQ7Z2E3 356 aaKnown RBP15.81■□□□□ 0.12
SNCA-204ENST00000394989 LRRC47Q8N1G4 583 aaKnown RBP15.81■□□□□ 0.12
SNCA-204ENST00000394989 TMX1Q9H3N1 280 aa15.81■□□□□ 0.12
SNCA-204ENST00000394989 VAT1LQ9HCJ6 419 aa15.81■□□□□ 0.12
SNCA-204ENST00000394989 SMARCA1P28370 1054 aa15.81■□□□□ 0.12
SNCA-204ENST00000394989 EIF6P56537 245 aaKnown RBP15.81■□□□□ 0.12
SNCA-204ENST00000394989 NAALADL2Q58DX5 795 aa15.81■□□□□ 0.12
SNCA-204ENST00000394989 KLHL10Q6JEL2 608 aa15.81■□□□□ 0.12
SNCA-204ENST00000394989 RIOX1Q9H6W3 641 aa15.81■□□□□ 0.12
SNCA-204ENST00000394989 FRMPD2Q68DX3 1309 aaPredicted RBP15.81■□□□□ 0.12
SNCA-204ENST00000394989 ZNF646O15015 1829 aaPredicted RBP15.81■□□□□ 0.12
SNCA-204ENST00000394989 NFIAQ12857 509 aa15.81■□□□□ 0.12
SNCA-204ENST00000394989 TBX2Q13207 712 aaPredicted RBP15.81■□□□□ 0.12
SNCA-204ENST00000394989 FAM177A1Q8N128 213 aaPredicted RBP15.81■□□□□ 0.12
SNCA-204ENST00000394989 RRP36Q96EU6 259 aaKnown RBP15.81■□□□□ 0.12
SNCA-204ENST00000394989 DBNDD1Q9H9R9 158 aa15.81■□□□□ 0.12
SNCA-204ENST00000394989 PARP3Q9Y6F1 533 aa15.81■□□□□ 0.12
SNCA-204ENST00000394989 SMCO2A6NFE2 343 aa15.8■□□□□ 0.12
SNCA-204ENST00000394989 SNHG28P0DPA3 235 aa15.8■□□□□ 0.12
SNCA-204ENST00000394989 SHMT1P34896 483 aa15.8■□□□□ 0.12
SNCA-204ENST00000394989 STX17P56962 302 aa15.8■□□□□ 0.12
SNCA-204ENST00000394989 SERPINB13Q9UIV8 391 aa15.8■□□□□ 0.12
SNCA-204ENST00000394989 PCDHAC2Q9Y5I4 1007 aa15.8■□□□□ 0.12
SNCA-204ENST00000394989 SCN9AQ15858 1988 aa15.8■□□□□ 0.12
SNCA-204ENST00000394989 SYNRGQ9UMZ2 1314 aa15.8■□□□□ 0.12
SNCA-204ENST00000394989 GREB1LQ9C091 1923 aaPredicted RBP15.8■□□□□ 0.12
SNCA-204ENST00000394989 CDK11BP21127 795 aaKnown RBP15.8■□□□□ 0.12
SNCA-204ENST00000394989 CT47A1Q5JQC4 288 aaPredicted RBP15.8■□□□□ 0.12
SNCA-204ENST00000394989 CEP135Q66GS9 1140 aa15.8■□□□□ 0.12
SNCA-204ENST00000394989 DTHD1Q6ZMT9 781 aa15.8■□□□□ 0.12
SNCA-204ENST00000394989 LRRC15Q8TF66 581 aa15.8■□□□□ 0.12
SNCA-204ENST00000394989 DISC1Q9NRI5 854 aa15.8■□□□□ 0.12
SNCA-204ENST00000394989 HMGB2P26583 209 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms