RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 INTS13Q9NVM9 706 aa21.14■□□□□ 0.97
SIL1-202ENST00000394817 PCDHA6Q9UN73 950 aa21.14■□□□□ 0.97
SIL1-202ENST00000394817 PCDHA8Q9Y5H6 950 aa21.14■□□□□ 0.97
SIL1-202ENST00000394817 CCDC194A0A1B0GVG4 234 aa21.13■□□□□ 0.97
SIL1-202ENST00000394817 PARP1P09874 1014 aaKnown RBP21.13■□□□□ 0.97
SIL1-202ENST00000394817 TOP1P11387 765 aaKnown RBP21.13■□□□□ 0.97
SIL1-202ENST00000394817 SMARCA1P28370 1054 aa21.13■□□□□ 0.97
SIL1-202ENST00000394817 RASGRP4Q8TDF6 673 aa21.13■□□□□ 0.97
SIL1-202ENST00000394817 CEP95Q96GE4 821 aa21.13■□□□□ 0.97
SIL1-202ENST00000394817 ZC3H12CQ9C0D7 883 aaKnown RBP21.13■□□□□ 0.97
SIL1-202ENST00000394817 PAXBP1Q9Y5B6 917 aa21.13■□□□□ 0.97
SIL1-202ENST00000394817 GREB1LQ9C091 1923 aaPredicted RBP21.12■□□□□ 0.97
SIL1-202ENST00000394817 HSP90AA2PQ14568 343 aaPredicted RBP21.12■□□□□ 0.97
SIL1-202ENST00000394817 PDXDC2PQ6P474 469 aa21.12■□□□□ 0.97
SIL1-202ENST00000394817 TRMT44Q8IYL2 757 aaKnown RBP21.12■□□□□ 0.97
SIL1-202ENST00000394817 TMEM232C9JQI7 657 aa21.12■□□□□ 0.97
SIL1-202ENST00000394817 CUL4BQ13620 913 aa21.12■□□□□ 0.97
SIL1-202ENST00000394817 RASGRP2Q7LDG7 609 aa21.12■□□□□ 0.97
SIL1-202ENST00000394817 TMX4Q9H1E5 349 aaPredicted RBP21.12■□□□□ 0.97
SIL1-202ENST00000394817 MTMR7Q9Y216 660 aa21.12■□□□□ 0.97
SIL1-202ENST00000394817 C10orf71Q711Q0 1435 aa21.12■□□□□ 0.97
SIL1-202ENST00000394817 GOLGA8HP0CJ92 632 aa21.11■□□□□ 0.97
SIL1-202ENST00000394817 RBM10P98175 930 aaKnown RBP21.11■□□□□ 0.97
SIL1-202ENST00000394817 GABPAQ06546 454 aa21.11■□□□□ 0.97
SIL1-202ENST00000394817 CCDC112Q8NEF3 446 aa21.11■□□□□ 0.97
SIL1-202ENST00000394817 CCDC12Q8WUD4 166 aaPredicted RBP21.11■□□□□ 0.97
SIL1-202ENST00000394817 MXD3Q9BW11 206 aa21.11■□□□□ 0.97
SIL1-202ENST00000394817 ZMYND12Q9H0C1 365 aa21.11■□□□□ 0.97
SIL1-202ENST00000394817 PSDA5PKW4 1024 aaPredicted RBP21.1■□□□□ 0.97
SIL1-202ENST00000394817 CASP1P29466 404 aa21.1■□□□□ 0.97
SIL1-202ENST00000394817 PTPN14Q15678 1187 aa21.1■□□□□ 0.97
SIL1-202ENST00000394817 CEP135Q66GS9 1140 aa21.1■□□□□ 0.97
SIL1-202ENST00000394817 E4F1Q66K89 784 aaPredicted RBP21.1■□□□□ 0.97
SIL1-202ENST00000394817 CERS5Q8N5B7 392 aa21.1■□□□□ 0.97
SIL1-202ENST00000394817 SYNRGQ9UMZ2 1314 aa21.1■□□□□ 0.97
SIL1-202ENST00000394817 CTIFO43310 598 aaKnown RBP21.1■□□□□ 0.97
SIL1-202ENST00000394817 TXLNAP40222 546 aa21.1■□□□□ 0.97
SIL1-202ENST00000394817 MAP7D2Q96T17 732 aa21.1■□□□□ 0.97
SIL1-202ENST00000394817 MYH4Q9Y623 1939 aa21.09■□□□□ 0.97
SIL1-202ENST00000394817 ZNF646O15015 1829 aaPredicted RBP21.09■□□□□ 0.97
SIL1-202ENST00000394817 LAD1O00515 517 aa21.09■□□□□ 0.97
SIL1-202ENST00000394817 GTPBP6O43824 516 aaPredicted RBP21.09■□□□□ 0.97
SIL1-202ENST00000394817 CD44P16070 742 aaKnown RBP21.09■□□□□ 0.97
SIL1-202ENST00000394817 USP17L2Q6R6M4 530 aa21.09■□□□□ 0.97
SIL1-202ENST00000394817 TMX1Q9H3N1 280 aa21.09■□□□□ 0.97
SIL1-202ENST00000394817 MYO3BQ8WXR4 1341 aa21.08■□□□□ 0.97
SIL1-202ENST00000394817 KIF2AO00139 706 aaPredicted RBP21.08■□□□□ 0.97
SIL1-202ENST00000394817 CDK11BP21127 795 aaKnown RBP21.08■□□□□ 0.97
SIL1-202ENST00000394817 TBX2Q13207 712 aaPredicted RBP21.08■□□□□ 0.97
SIL1-202ENST00000394817 INF2Q27J81 1249 aa21.08■□□□□ 0.97
SIL1-202ENST00000394817 HSP90AA4PQ58FG1 418 aa21.08■□□□□ 0.97
SIL1-202ENST00000394817 SPATA1Q5VX52 437 aa21.08■□□□□ 0.97
SIL1-202ENST00000394817 MTERF4Q7Z6M4 381 aaKnown RBP21.08■□□□□ 0.97
SIL1-202ENST00000394817 RRP36Q96EU6 259 aaKnown RBP21.08■□□□□ 0.97
SIL1-202ENST00000394817 SAMSN1Q9NSI8 373 aaKnown RBP21.08■□□□□ 0.97
SIL1-202ENST00000394817 TRMT1Q9NXH9 659 aaKnown RBP21.08■□□□□ 0.97
SIL1-202ENST00000394817 GOLGB1Q14789 3259 aaKnown RBP21.08■□□□□ 0.97
SIL1-202ENST00000394817 F8W031 263 aaPredicted RBP21.08■□□□□ 0.96
SIL1-202ENST00000394817 PRPHP41219 470 aa21.08■□□□□ 0.96
SIL1-202ENST00000394817 NAPAP54920 295 aa21.08■□□□□ 0.96
SIL1-202ENST00000394817 MTRQ99707 1265 aa21.08■□□□□ 0.96
SIL1-202ENST00000394817 PDCL3Q9H2J4 239 aa21.08■□□□□ 0.96
SIL1-202ENST00000394817 CPVLQ9H3G5 476 aa21.08■□□□□ 0.96
SIL1-202ENST00000394817 DBNDD1Q9H9R9 158 aa21.08■□□□□ 0.96
SIL1-202ENST00000394817 TTF2Q9UNY4 1162 aaKnown RBP21.08■□□□□ 0.96
SIL1-202ENST00000394817 SCN9AQ15858 1988 aa21.07■□□□□ 0.96
SIL1-202ENST00000394817 PPP1R3GB7ZBB8 358 aa21.07■□□□□ 0.96
SIL1-202ENST00000394817 PICALMQ13492 652 aa21.07■□□□□ 0.96
SIL1-202ENST00000394817 DTHD1Q6ZMT9 781 aa21.07■□□□□ 0.96
SIL1-202ENST00000394817 KRT25Q7Z3Z0 450 aa21.07■□□□□ 0.96
SIL1-202ENST00000394817 CNKSR1Q969H4 720 aa21.07■□□□□ 0.96
SIL1-202ENST00000394817 TMEM60Q9H2L4 133 aa21.07■□□□□ 0.96
SIL1-202ENST00000394817 DDX4Q9NQI0 724 aaKnown RBP21.07■□□□□ 0.96
SIL1-202ENST00000394817 KCNQ5Q9NR82 932 aa21.07■□□□□ 0.96
SIL1-202ENST00000394817 MTMR4Q9NYA4 1195 aa21.07■□□□□ 0.96
SIL1-202ENST00000394817 SEC63Q9UGP8 760 aaKnown RBP21.07■□□□□ 0.96
SIL1-202ENST00000394817 IGKV6D-41A0A0C4DH26 115 aa21.06■□□□□ 0.96
SIL1-202ENST00000394817 A0A1B0GTH6 734 aa21.06■□□□□ 0.96
SIL1-202ENST00000394817 PDHBP11177 359 aa21.06■□□□□ 0.96
SIL1-202ENST00000394817 GNA11P29992 359 aa21.06■□□□□ 0.96
SIL1-202ENST00000394817 SPECC1LQ69YQ0 1117 aa21.06■□□□□ 0.96
SIL1-202ENST00000394817 C7orf43Q8WVR3 580 aa21.06■□□□□ 0.96
SIL1-202ENST00000394817 PPP1R13BQ96KQ4 1090 aa21.06■□□□□ 0.96
SIL1-202ENST00000394817 RIOX1Q9H6W3 641 aa21.06■□□□□ 0.96
SIL1-202ENST00000394817 DISC1Q9NRI5 854 aa21.06■□□□□ 0.96
SIL1-202ENST00000394817 ESYT2A0FGR8 921 aa21.06■□□□□ 0.96
SIL1-202ENST00000394817 G3V3G9 751 aa21.06■□□□□ 0.96
SIL1-202ENST00000394817 hCG_1984214I3L0E3 225 aa21.06■□□□□ 0.96
SIL1-202ENST00000394817 DCAF8Q5TAQ9 597 aa21.06■□□□□ 0.96
SIL1-202ENST00000394817 CDKAL1Q5VV42 579 aa21.06■□□□□ 0.96
SIL1-202ENST00000394817 APTXQ7Z2E3 356 aaKnown RBP21.06■□□□□ 0.96
SIL1-202ENST00000394817 ZNF713Q8N859 430 aaPredicted RBP21.06■□□□□ 0.96
SIL1-202ENST00000394817 TSC1Q92574 1164 aa21.06■□□□□ 0.96
SIL1-202ENST00000394817 STAMQ92783 540 aa21.06■□□□□ 0.96
SIL1-202ENST00000394817 C6orf50Q9HD87 102 aa21.06■□□□□ 0.96
SIL1-202ENST00000394817 SWAP70Q9UH65 585 aa21.06■□□□□ 0.96
SIL1-202ENST00000394817 SIPA1L1O43166 1804 aa21.05■□□□□ 0.96
SIL1-202ENST00000394817 USP17L5A8MUK1 530 aa21.05■□□□□ 0.96
SIL1-202ENST00000394817 STAT6P42226 847 aa21.05■□□□□ 0.96
SIL1-202ENST00000394817 NR1I3Q14994 352 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms