RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 GUCY1A2P33402 732 aa8.04□□□□□ -1.12
RTN4-205ENST00000394609 CEBPZQ03701 1054 aaKnown RBP8.04□□□□□ -1.12
RTN4-205ENST00000394609 SSRP1Q08945 709 aaKnown RBP8.04□□□□□ -1.12
RTN4-205ENST00000394609 TROAPQ12815 778 aa8.04□□□□□ -1.12
RTN4-205ENST00000394609 RCSD1Q6JBY9 416 aa8.04□□□□□ -1.12
RTN4-205ENST00000394609 CAVIN1Q6NZI2 390 aaKnown RBP8.04□□□□□ -1.12
RTN4-205ENST00000394609 C16orf86Q6ZW13 317 aa8.04□□□□□ -1.12
RTN4-205ENST00000394609 ALG1Q9BT22 464 aa8.04□□□□□ -1.12
RTN4-205ENST00000394609 TDRD3Q9H7E2 651 aaKnown RBP8.04□□□□□ -1.12
RTN4-205ENST00000394609 MTMR7Q9Y216 660 aa8.04□□□□□ -1.12
RTN4-205ENST00000394609 ZKSCAN5Q9Y2L8 839 aa8.04□□□□□ -1.12
RTN4-205ENST00000394609 CCDC88AQ3V6T2 1871 aa8.04□□□□□ -1.12
RTN4-205ENST00000394609 MYH2Q9UKX2 1941 aa8.03□□□□□ -1.12
RTN4-205ENST00000394609 ROBO3Q96MS0 1386 aa8.03□□□□□ -1.12
RTN4-205ENST00000394609 CCDC196A0A1B0GTZ2 297 aa8.03□□□□□ -1.12
RTN4-205ENST00000394609 IFNAR1P17181 557 aa8.03□□□□□ -1.12
RTN4-205ENST00000394609 KRT85P78386 507 aa8.03□□□□□ -1.12
RTN4-205ENST00000394609 HDLBPQ00341 1268 aaKnown RBP8.03□□□□□ -1.12
RTN4-205ENST00000394609 CFAP100Q494V2 611 aa8.03□□□□□ -1.12
RTN4-205ENST00000394609 SOGA3Q5TF21 947 aa8.03□□□□□ -1.12
RTN4-205ENST00000394609 RSBN1LQ6PCB5 846 aaPredicted RBP8.03□□□□□ -1.12
RTN4-205ENST00000394609 TTC6Q86TZ1 520 aa8.03□□□□□ -1.12
RTN4-205ENST00000394609 NIM1KQ8IY84 436 aa8.03□□□□□ -1.12
RTN4-205ENST00000394609 CRACR2BQ8N4Y2 399 aaPredicted RBP8.03□□□□□ -1.12
RTN4-205ENST00000394609 FBXO18Q8NFZ0 1043 aa8.03□□□□□ -1.12
RTN4-205ENST00000394609 PRMT6Q96LA8 375 aaPredicted RBP8.03□□□□□ -1.12
RTN4-205ENST00000394609 MRIQ9BWK5 157 aa8.03□□□□□ -1.12
RTN4-205ENST00000394609 OSBPL5Q9H0X9 879 aaPredicted RBP8.03□□□□□ -1.12
RTN4-205ENST00000394609 ZNF287Q9HBT7 754 aa8.03□□□□□ -1.12
RTN4-205ENST00000394609 CCDC39Q9UFE4 941 aa8.03□□□□□ -1.12
RTN4-205ENST00000394609 SERPINA10Q9UK55 444 aa8.03□□□□□ -1.12
RTN4-205ENST00000394609 ZNRF3Q9ULT6 936 aa8.03□□□□□ -1.12
RTN4-205ENST00000394609 STX8Q9UNK0 236 aa8.03□□□□□ -1.12
RTN4-205ENST00000394609 CD2APQ9Y5K6 639 aa8.03□□□□□ -1.12
RTN4-205ENST00000394609 NFKBIEO00221 500 aa8.02□□□□□ -1.12
RTN4-205ENST00000394609 PLEKHA8P1O95397 391 aa8.02□□□□□ -1.12
RTN4-205ENST00000394609 VIL1P09327 827 aaKnown RBP8.02□□□□□ -1.12
RTN4-205ENST00000394609 SMCPP49901 116 aaPredicted RBP8.02□□□□□ -1.12
RTN4-205ENST00000394609 SASS6Q6UVJ0 657 aa8.02□□□□□ -1.12
RTN4-205ENST00000394609 NBPF11Q86T75 865 aa8.02□□□□□ -1.12
RTN4-205ENST00000394609 ZSCAN29Q8IWY8 852 aaPredicted RBP8.02□□□□□ -1.12
RTN4-205ENST00000394609 TRIM22Q8IYM9 498 aa8.02□□□□□ -1.12
RTN4-205ENST00000394609 NLGN2Q8NFZ4 835 aa8.02□□□□□ -1.12
RTN4-205ENST00000394609 PIBF1Q8WXW3 757 aa8.02□□□□□ -1.12
RTN4-205ENST00000394609 FTOQ9C0B1 505 aaKnown RBP eCLIP8.02□□□□□ -1.12
RTN4-205ENST00000394609 TAOK3Q9H2K8 898 aa8.02□□□□□ -1.12
RTN4-205ENST00000394609 ZSCAN16Q9H4T2 348 aaPredicted RBP8.02□□□□□ -1.12
RTN4-205ENST00000394609 KAT14Q9H8E8 782 aa8.02□□□□□ -1.12
RTN4-205ENST00000394609 SCN9AQ15858 1988 aa8.02□□□□□ -1.13
RTN4-205ENST00000394609 COL4A5P29400 1685 aa8.02□□□□□ -1.13
RTN4-205ENST00000394609 DDTLA6NHG4 134 aaPredicted RBP8.02□□□□□ -1.13
RTN4-205ENST00000394609 FAM196BA6NMK8 535 aa8.02□□□□□ -1.13
RTN4-205ENST00000394609 POTECB2RU33 542 aa8.02□□□□□ -1.13
RTN4-205ENST00000394609 AXIN1O15169 862 aa8.02□□□□□ -1.13
RTN4-205ENST00000394609 DDAH1O94760 285 aa8.02□□□□□ -1.13
RTN4-205ENST00000394609 RCAN1P53805 252 aa8.02□□□□□ -1.13
RTN4-205ENST00000394609 GABPAQ06546 454 aa8.02□□□□□ -1.13
RTN4-205ENST00000394609 CXCL9Q07325 125 aa8.02□□□□□ -1.13
RTN4-205ENST00000394609 KRT40Q6A162 431 aa8.02□□□□□ -1.13
RTN4-205ENST00000394609 DGKHQ86XP1 1220 aa8.02□□□□□ -1.13
RTN4-205ENST00000394609 OGFOD1Q8N543 542 aa8.02□□□□□ -1.13
RTN4-205ENST00000394609 TMEM87AQ8NBN3 555 aa8.02□□□□□ -1.13
RTN4-205ENST00000394609 PNMA1Q8ND90 353 aa8.02□□□□□ -1.13
RTN4-205ENST00000394609 CTCFLQ8NI51 663 aaPredicted RBP8.02□□□□□ -1.13
RTN4-205ENST00000394609 NLRP7Q8WX94 980 aa8.02□□□□□ -1.13
RTN4-205ENST00000394609 GMLQ99445 158 aa8.02□□□□□ -1.13
RTN4-205ENST00000394609 SERPINB13Q9UIV8 391 aa8.02□□□□□ -1.13
RTN4-205ENST00000394609 CLRN2A0PK11 232 aa8.01□□□□□ -1.13
RTN4-205ENST00000394609 TTC24A2A3L6 582 aaPredicted RBP8.01□□□□□ -1.13
RTN4-205ENST00000394609 KIF28PB7ZC32 967 aa8.01□□□□□ -1.13
RTN4-205ENST00000394609 CALM1P0DP23 149 aa8.01□□□□□ -1.13
RTN4-205ENST00000394609 CALM2P0DP24 149 aa8.01□□□□□ -1.13
RTN4-205ENST00000394609 CALM3P0DP25 149 aa8.01□□□□□ -1.13
RTN4-205ENST00000394609 AKR1B1P15121 316 aa8.01□□□□□ -1.13
RTN4-205ENST00000394609 EIF6P56537 245 aaKnown RBP8.01□□□□□ -1.13
RTN4-205ENST00000394609 USP46P62068 366 aa8.01□□□□□ -1.13
RTN4-205ENST00000394609 TRIM29Q14134 588 aa8.01□□□□□ -1.13
RTN4-205ENST00000394609 SH3BP5LQ7L8J4 393 aa8.01□□□□□ -1.13
RTN4-205ENST00000394609 RASGRP2Q7LDG7 609 aa8.01□□□□□ -1.13
RTN4-205ENST00000394609 CLEC10AQ8IUN9 316 aa8.01□□□□□ -1.13
RTN4-205ENST00000394609 SRBD1Q8N5C6 995 aaKnown RBP8.01□□□□□ -1.13
RTN4-205ENST00000394609 NEDD1Q8NHV4 660 aa8.01□□□□□ -1.13
RTN4-205ENST00000394609 JDP2Q8WYK2 163 aa8.01□□□□□ -1.13
RTN4-205ENST00000394609 CEP95Q96GE4 821 aa8.01□□□□□ -1.13
RTN4-205ENST00000394609 SPATA32Q96LK8 384 aa8.01□□□□□ -1.13
RTN4-205ENST00000394609 PRIMPOLQ96LW4 560 aa8.01□□□□□ -1.13
RTN4-205ENST00000394609 PHOX2BQ99453 314 aa8.01□□□□□ -1.13
RTN4-205ENST00000394609 TMEM47Q9BQJ4 181 aa8.01□□□□□ -1.13
RTN4-205ENST00000394609 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.01□□□□□ -1.13
RTN4-205ENST00000394609 PRDM9Q9NQV7 894 aa8.01□□□□□ -1.13
RTN4-205ENST00000394609 TCP11L1Q9NUJ3 509 aa8.01□□□□□ -1.13
RTN4-205ENST00000394609 KCNJ14Q9UNX9 436 aa8.01□□□□□ -1.13
RTN4-205ENST00000394609 NID2Q14112 1375 aa8.01□□□□□ -1.13
RTN4-205ENST00000394609 KIAA1551Q9HCM1 1747 aa8.01□□□□□ -1.13
RTN4-205ENST00000394609 SHTN1A0MZ66 631 aa8□□□□□ -1.13
RTN4-205ENST00000394609 TCP10L2B9ZVM9 353 aa8□□□□□ -1.13
RTN4-205ENST00000394609 MPHOSPH10O00566 681 aaKnown RBP8□□□□□ -1.13
RTN4-205ENST00000394609 WNT7AO00755 349 aa8□□□□□ -1.13
RTN4-205ENST00000394609 MBD3O95983 291 aa8□□□□□ -1.13
RTN4-205ENST00000394609 HLA-DOAP06340 250 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms