RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 OAZ1P54368 228 aa20.87■□□□□ 0.93
SNRPA1-202ENST00000394082 TRIM60Q495X7 471 aa20.87■□□□□ 0.93
SNRPA1-202ENST00000394082 GMCL1P1Q8NEA9 526 aa20.87■□□□□ 0.93
SNRPA1-202ENST00000394082 TSEN34Q9BSV6 310 aaKnown RBP20.87■□□□□ 0.93
SNRPA1-202ENST00000394082 MTMR4Q9NYA4 1195 aa20.87■□□□□ 0.93
SNRPA1-202ENST00000394082 CLIP2Q9UDT6 1046 aa20.87■□□□□ 0.93
SNRPA1-202ENST00000394082 FEM1BQ9UK73 627 aa20.87■□□□□ 0.93
SNRPA1-202ENST00000394082 CNPY2Q9Y2B0 182 aa20.87■□□□□ 0.93
SNRPA1-202ENST00000394082 RAD21O60216 631 aa20.86■□□□□ 0.93
SNRPA1-202ENST00000394082 TTLL1O95922 423 aa20.86■□□□□ 0.93
SNRPA1-202ENST00000394082 SNRNP48Q6IEG0 339 aaKnown RBP20.86■□□□□ 0.93
SNRPA1-202ENST00000394082 IFNL3Q8IZI9 196 aa20.86■□□□□ 0.93
SNRPA1-202ENST00000394082 NUP88Q99567 741 aaPredicted RBP20.86■□□□□ 0.93
SNRPA1-202ENST00000394082 NACAP1Q9BZK3 213 aa20.86■□□□□ 0.93
SNRPA1-202ENST00000394082 SLC38A10Q9HBR0 1119 aa20.86■□□□□ 0.93
SNRPA1-202ENST00000394082 PDLIM7Q9NR12 457 aa20.86■□□□□ 0.93
SNRPA1-202ENST00000394082 TACC3Q9Y6A5 838 aa20.86■□□□□ 0.93
SNRPA1-202ENST00000394082 ZBED4O75132 1171 aa20.85■□□□□ 0.93
SNRPA1-202ENST00000394082 CEP95Q96GE4 821 aa20.85■□□□□ 0.93
SNRPA1-202ENST00000394082 FBXO40Q9UH90 709 aa20.85■□□□□ 0.93
SNRPA1-202ENST00000394082 MYH4Q9Y623 1939 aa20.84■□□□□ 0.93
SNRPA1-202ENST00000394082 M0R2C6 588 aa20.84■□□□□ 0.93
SNRPA1-202ENST00000394082 ADAMTS4O75173 837 aa20.84■□□□□ 0.93
SNRPA1-202ENST00000394082 MYCNP04198 464 aaPredicted RBP20.84■□□□□ 0.93
SNRPA1-202ENST00000394082 APPP05067 770 aa20.84■□□□□ 0.93
SNRPA1-202ENST00000394082 SLC3A2P08195 630 aaKnown RBP20.84■□□□□ 0.93
SNRPA1-202ENST00000394082 TAL1P17542 331 aaPredicted RBP20.84■□□□□ 0.93
SNRPA1-202ENST00000394082 PDE4BQ07343 736 aa20.84■□□□□ 0.93
SNRPA1-202ENST00000394082 PPP4R3BQ5MIZ7 849 aa20.84■□□□□ 0.93
SNRPA1-202ENST00000394082 TSHZ3Q63HK5 1081 aa20.84■□□□□ 0.93
SNRPA1-202ENST00000394082 CHST13Q8NET6 341 aa20.84■□□□□ 0.93
SNRPA1-202ENST00000394082 NEDD1Q8NHV4 660 aa20.84■□□□□ 0.93
SNRPA1-202ENST00000394082 PI4K2BQ8TCG2 481 aa20.84■□□□□ 0.93
SNRPA1-202ENST00000394082 DDX11Q96FC9 970 aa20.84■□□□□ 0.93
SNRPA1-202ENST00000394082 TOX2Q96NM4 488 aa20.84■□□□□ 0.93
SNRPA1-202ENST00000394082 RIPK3Q9Y572 518 aa20.84■□□□□ 0.93
SNRPA1-202ENST00000394082 UNC80Q8N2C7 3258 aa20.84■□□□□ 0.93
SNRPA1-202ENST00000394082 MOXD2PA6NHM9 499 aa20.83■□□□□ 0.93
SNRPA1-202ENST00000394082 PGK1P00558 417 aa20.83■□□□□ 0.93
SNRPA1-202ENST00000394082 TLE2Q04725 743 aa20.83■□□□□ 0.93
SNRPA1-202ENST00000394082 BADQ92934 168 aa20.83■□□□□ 0.93
SNRPA1-202ENST00000394082 FERMT2Q96AC1 680 aa20.83■□□□□ 0.93
SNRPA1-202ENST00000394082 PRDM5Q9NQX1 630 aaPredicted RBP20.83■□□□□ 0.93
SNRPA1-202ENST00000394082 FAM184BQ9ULE4 1060 aa20.83■□□□□ 0.93
SNRPA1-202ENST00000394082 A0A1W2PQ45 241 aaPredicted RBP20.82■□□□□ 0.92
SNRPA1-202ENST00000394082 A0A1W2PQY0 241 aa20.82■□□□□ 0.92
SNRPA1-202ENST00000394082 TRIM43BA6NCK2 446 aa20.82■□□□□ 0.92
SNRPA1-202ENST00000394082 DLL1O00548 723 aa20.82■□□□□ 0.92
SNRPA1-202ENST00000394082 KIAA0355O15063 1070 aa20.82■□□□□ 0.92
SNRPA1-202ENST00000394082 DUSP11O75319 330 aaKnown RBP20.82■□□□□ 0.92
SNRPA1-202ENST00000394082 SNAI1O95863 264 aaPredicted RBP20.82■□□□□ 0.92
SNRPA1-202ENST00000394082 ANKRD33Q7Z3H0 272 aa20.82■□□□□ 0.92
SNRPA1-202ENST00000394082 KLHDC9Q8NEP7 349 aa20.82■□□□□ 0.92
SNRPA1-202ENST00000394082 NUP133Q8WUM0 1156 aa20.82■□□□□ 0.92
SNRPA1-202ENST00000394082 TRIM43Q96BQ3 446 aaPredicted RBP20.82■□□□□ 0.92
SNRPA1-202ENST00000394082 CTDP1Q9Y5B0 961 aaPredicted RBP20.82■□□□□ 0.92
SNRPA1-202ENST00000394082 PLA2G6O60733 806 aa20.81■□□□□ 0.92
SNRPA1-202ENST00000394082 PRDM1O75626 825 aa20.81■□□□□ 0.92
SNRPA1-202ENST00000394082 CLTBP09497 229 aa20.81■□□□□ 0.92
SNRPA1-202ENST00000394082 TSPY3P0CV98 308 aa20.81■□□□□ 0.92
SNRPA1-202ENST00000394082 TSPY8P0CW00 308 aa20.81■□□□□ 0.92
SNRPA1-202ENST00000394082 CST5P28325 142 aaPredicted RBP20.81■□□□□ 0.92
SNRPA1-202ENST00000394082 SHHQ15465 462 aa20.81■□□□□ 0.92
SNRPA1-202ENST00000394082 ZMYM1Q5SVZ6 1142 aa20.81■□□□□ 0.92
SNRPA1-202ENST00000394082 CCSAPQ6IQ19 270 aaPredicted RBP20.81■□□□□ 0.92
SNRPA1-202ENST00000394082 SH3RF1Q7Z6J0 888 aa20.81■□□□□ 0.92
SNRPA1-202ENST00000394082 STK11IPQ8N1F8 1099 aa20.81■□□□□ 0.92
SNRPA1-202ENST00000394082 GMCL1Q96IK5 515 aa20.81■□□□□ 0.92
SNRPA1-202ENST00000394082 ABHD16BQ9H3Z7 469 aa20.81■□□□□ 0.92
SNRPA1-202ENST00000394082 BMP3P12645 472 aa20.8■□□□□ 0.92
SNRPA1-202ENST00000394082 ACLYP53396 1101 aa20.8■□□□□ 0.92
SNRPA1-202ENST00000394082 SMAD3P84022 425 aaKnown RBP20.8■□□□□ 0.92
SNRPA1-202ENST00000394082 CPXCR1Q8N123 301 aa20.8■□□□□ 0.92
SNRPA1-202ENST00000394082 KIFC2Q96AC6 838 aa20.8■□□□□ 0.92
SNRPA1-202ENST00000394082 GUCD1Q96NT3 240 aa20.8■□□□□ 0.92
SNRPA1-202ENST00000394082 NAPBQ9H115 298 aa20.8■□□□□ 0.92
SNRPA1-202ENST00000394082 PCDHB15Q9Y5E8 787 aa20.8■□□□□ 0.92
SNRPA1-202ENST00000394082 SYNRGQ9UMZ2 1314 aa20.79■□□□□ 0.92
SNRPA1-202ENST00000394082 STAT2P52630 851 aa20.79■□□□□ 0.92
SNRPA1-202ENST00000394082 NKX3-2P78367 333 aa20.79■□□□□ 0.92
SNRPA1-202ENST00000394082 PPARAQ07869 468 aa20.79■□□□□ 0.92
SNRPA1-202ENST00000394082 ACVR2BQ13705 512 aa20.79■□□□□ 0.92
SNRPA1-202ENST00000394082 C9orf50Q5SZB4 431 aa20.79■□□□□ 0.92
SNRPA1-202ENST00000394082 ZNF697Q5TEC3 545 aa20.79■□□□□ 0.92
SNRPA1-202ENST00000394082 SLFN13Q68D06 897 aa20.79■□□□□ 0.92
SNRPA1-202ENST00000394082 FAM160B2Q86V87 743 aa20.79■□□□□ 0.92
SNRPA1-202ENST00000394082 TICAM2Q86XR7 235 aa20.79■□□□□ 0.92
SNRPA1-202ENST00000394082 ANKRD35Q8N283 1001 aa20.79■□□□□ 0.92
SNRPA1-202ENST00000394082 CHURC1Q8WUH1 139 aa20.79■□□□□ 0.92
SNRPA1-202ENST00000394082 SEC62Q99442 399 aaKnown RBP20.79■□□□□ 0.92
SNRPA1-202ENST00000394082 FSD1Q9BTV5 496 aa20.79■□□□□ 0.92
SNRPA1-202ENST00000394082 RAVER2Q9HCJ3 691 aaKnown RBP20.79■□□□□ 0.92
SNRPA1-202ENST00000394082 ELP1O95163 1332 aa20.78■□□□□ 0.92
SNRPA1-202ENST00000394082 MX1P20591 662 aa20.78■□□□□ 0.92
SNRPA1-202ENST00000394082 TFAP4Q01664 338 aa20.78■□□□□ 0.92
SNRPA1-202ENST00000394082 LRRC47Q8N1G4 583 aaKnown RBP20.78■□□□□ 0.92
SNRPA1-202ENST00000394082 FGD4Q96M96 766 aa20.78■□□□□ 0.92
SNRPA1-202ENST00000394082 STARD7Q9NQZ5 370 aa20.78■□□□□ 0.92
SNRPA1-202ENST00000394082 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.78■□□□□ 0.92
SNRPA1-202ENST00000394082 MROH7Q68CQ1 1323 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms