RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 A0A1W2PQD8 194 aa22.56■■□□□ 1.2
RAB5C-202ENST00000393860 A0A1W2PRG0 241 aa22.56■■□□□ 1.2
RAB5C-202ENST00000393860 PPP6R2O75170 966 aa22.56■■□□□ 1.2
RAB5C-202ENST00000393860 LETM1O95202 739 aaPredicted RBP22.56■■□□□ 1.2
RAB5C-202ENST00000393860 NDUFA8P51970 172 aa22.56■■□□□ 1.2
RAB5C-202ENST00000393860 SNW1Q13573 536 aaKnown RBP22.56■■□□□ 1.2
RAB5C-202ENST00000393860 ILDR2Q71H61 639 aa22.56■■□□□ 1.2
RAB5C-202ENST00000393860 JMJD4Q9H9V9 463 aa22.56■■□□□ 1.2
RAB5C-202ENST00000393860 USP17L10C9JJH3 530 aa22.55■■□□□ 1.2
RAB5C-202ENST00000393860 ECE1P42892 770 aa22.55■■□□□ 1.2
RAB5C-202ENST00000393860 SLC1A4P43007 532 aa22.55■■□□□ 1.2
RAB5C-202ENST00000393860 FAM160A1Q05DH4 1040 aa22.55■■□□□ 1.2
RAB5C-202ENST00000393860 ENGASEQ8NFI3 743 aa22.55■■□□□ 1.2
RAB5C-202ENST00000393860 COA7Q96BR5 231 aa22.55■■□□□ 1.2
RAB5C-202ENST00000393860 ZBTB21Q9ULJ3 1066 aa22.55■■□□□ 1.2
RAB5C-202ENST00000393860 NOL7Q9UMY1 257 aaKnown RBP22.55■■□□□ 1.2
RAB5C-202ENST00000393860 F5H6K3 240 aa22.55■■□□□ 1.2
RAB5C-202ENST00000393860 GRIN1Q05586 938 aa22.55■■□□□ 1.2
RAB5C-202ENST00000393860 KLRC3Q07444 240 aa22.55■■□□□ 1.2
RAB5C-202ENST00000393860 GPATCH4Q5T3I0 446 aaKnown RBP22.55■■□□□ 1.2
RAB5C-202ENST00000393860 JMYQ8N9B5 988 aa22.55■■□□□ 1.2
RAB5C-202ENST00000393860 RNF214Q8ND24 703 aa22.55■■□□□ 1.2
RAB5C-202ENST00000393860 TRIM75PA6NK02 468 aa22.54■■□□□ 1.2
RAB5C-202ENST00000393860 NDUFB10O96000 172 aa22.54■■□□□ 1.2
RAB5C-202ENST00000393860 YBX3P16989 372 aaKnown RBP eCLIP22.54■■□□□ 1.27e-8■■■□□ 18
RAB5C-202ENST00000393860 ZNF174Q15697 407 aa22.54■■□□□ 1.2
RAB5C-202ENST00000393860 MAP3K11Q16584 847 aa22.54■■□□□ 1.2
RAB5C-202ENST00000393860 CCDC84Q86UT8 332 aaPredicted RBP22.54■■□□□ 1.2
RAB5C-202ENST00000393860 TRPM4Q8TD43 1214 aa22.54■■□□□ 1.2
RAB5C-202ENST00000393860 ACER1Q8TDN7 264 aa22.54■■□□□ 1.2
RAB5C-202ENST00000393860 DCAF4Q8WV16 495 aa22.54■■□□□ 1.2
RAB5C-202ENST00000393860 PCDHA6Q9UN73 950 aa22.54■■□□□ 1.2
RAB5C-202ENST00000393860 PCDHA8Q9Y5H6 950 aa22.54■■□□□ 1.2
RAB5C-202ENST00000393860 SPECC1Q5M775 1068 aa22.53■■□□□ 1.2
RAB5C-202ENST00000393860 TTC38Q5R3I4 469 aa22.53■■□□□ 1.2
RAB5C-202ENST00000393860 SHC4Q6S5L8 630 aa22.53■■□□□ 1.2
RAB5C-202ENST00000393860 SPICE1Q8N0Z3 855 aa22.53■■□□□ 1.2
RAB5C-202ENST00000393860 TEPSINQ96N21 525 aa22.53■■□□□ 1.2
RAB5C-202ENST00000393860 SMCO2A6NFE2 343 aa22.53■■□□□ 1.2
RAB5C-202ENST00000393860 H7C1D1 291 aa22.53■■□□□ 1.2
RAB5C-202ENST00000393860 TBC1D12O60347 775 aa22.53■■□□□ 1.2
RAB5C-202ENST00000393860 PFKFB1P16118 471 aa22.53■■□□□ 1.2
RAB5C-202ENST00000393860 MMP14P50281 582 aa22.53■■□□□ 1.2
RAB5C-202ENST00000393860 TNFAIP1Q13829 316 aa22.53■■□□□ 1.2
RAB5C-202ENST00000393860 FMR1NBQ8N0W7 255 aaPredicted RBP22.53■■□□□ 1.2
RAB5C-202ENST00000393860 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.53■■□□□ 1.2
RAB5C-202ENST00000393860 M0R2N6 131 aa22.52■■□□□ 1.2
RAB5C-202ENST00000393860 KINO60870 393 aaKnown RBP22.52■■□□□ 1.2
RAB5C-202ENST00000393860 PPP1R11O60927 126 aaPredicted RBP22.52■■□□□ 1.2
RAB5C-202ENST00000393860 KRI1Q8N9T8 703 aaKnown RBP22.52■■□□□ 1.2
RAB5C-202ENST00000393860 DAGLBQ8NCG7 672 aa22.52■■□□□ 1.2
RAB5C-202ENST00000393860 FBXO2Q9UK22 296 aaPredicted RBP22.52■■□□□ 1.2
RAB5C-202ENST00000393860 CUTAO60888 179 aa22.51■■□□□ 1.19
RAB5C-202ENST00000393860 CMA1P23946 247 aa22.51■■□□□ 1.19
RAB5C-202ENST00000393860 SNAP25P60880 206 aa22.51■■□□□ 1.19
RAB5C-202ENST00000393860 GMCL1P1Q8NEA9 526 aa22.51■■□□□ 1.19
RAB5C-202ENST00000393860 CCDC12Q8WUD4 166 aaPredicted RBP22.51■■□□□ 1.19
RAB5C-202ENST00000393860 FUCA2Q9BTY2 467 aa22.51■■□□□ 1.19
RAB5C-202ENST00000393860 ZMYND12Q9H0C1 365 aa22.51■■□□□ 1.19
RAB5C-202ENST00000393860 GPRC5DQ9NZD1 345 aa22.51■■□□□ 1.19
RAB5C-202ENST00000393860 RNF181Q9P0P0 153 aa22.51■■□□□ 1.19
RAB5C-202ENST00000393860 CEP131Q9UPN4 1083 aa22.51■■□□□ 1.19
RAB5C-202ENST00000393860 ATAD5Q96QE3 1844 aa22.51■■□□□ 1.19
RAB5C-202ENST00000393860 CCDC194A0A1B0GVG4 234 aa22.51■■□□□ 1.19
RAB5C-202ENST00000393860 CAP2P40123 477 aa22.51■■□□□ 1.19
RAB5C-202ENST00000393860 EPS15P42566 896 aa22.51■■□□□ 1.19
RAB5C-202ENST00000393860 ZYXQ15942 572 aaKnown RBP22.51■■□□□ 1.19
RAB5C-202ENST00000393860 KIAA1755Q5JYT7 1200 aa22.51■■□□□ 1.19
RAB5C-202ENST00000393860 ANGEL2Q5VTE6 544 aaKnown RBP22.51■■□□□ 1.19
RAB5C-202ENST00000393860 DEFB129Q9H1M3 183 aa22.51■■□□□ 1.19
RAB5C-202ENST00000393860 ARHGEF10LQ9HCE6 1279 aa22.51■■□□□ 1.19
RAB5C-202ENST00000393860 PNMA6FA0A0J9YX94 578 aa22.5■■□□□ 1.19
RAB5C-202ENST00000393860 IKQ13123 557 aaPredicted RBP22.5■■□□□ 1.19
RAB5C-202ENST00000393860 PRAMEF18Q5VWM3 479 aa22.5■■□□□ 1.19
RAB5C-202ENST00000393860 GPC2Q8N158 579 aa22.5■■□□□ 1.19
RAB5C-202ENST00000393860 C6orf50Q9HD87 102 aa22.5■■□□□ 1.19
RAB5C-202ENST00000393860 MCM7P33993 719 aa22.49■■□□□ 1.19
RAB5C-202ENST00000393860 GALNT17Q6IS24 598 aa22.49■■□□□ 1.19
RAB5C-202ENST00000393860 ERCC4Q92889 916 aaPredicted RBP22.49■■□□□ 1.19
RAB5C-202ENST00000393860 GLIS2Q9BZE0 524 aaPredicted RBP22.49■■□□□ 1.19
RAB5C-202ENST00000393860 TMEM260Q9NX78 707 aa22.49■■□□□ 1.19
RAB5C-202ENST00000393860 DDNO94850 711 aaPredicted RBP22.49■■□□□ 1.19
RAB5C-202ENST00000393860 PTPREP23469 700 aa22.49■■□□□ 1.19
RAB5C-202ENST00000393860 INF2Q27J81 1249 aa22.49■■□□□ 1.19
RAB5C-202ENST00000393860 NBPF12Q5TAG4 269 aaPredicted RBP22.49■■□□□ 1.19
RAB5C-202ENST00000393860 RESP18Q5W5W9 173 aa22.49■■□□□ 1.19
RAB5C-202ENST00000393860 GMCL1Q96IK5 515 aa22.49■■□□□ 1.19
RAB5C-202ENST00000393860 BIN2Q9UBW5 565 aaPredicted RBP22.49■■□□□ 1.19
RAB5C-202ENST00000393860 TMEM232C9JQI7 657 aa22.48■■□□□ 1.19
RAB5C-202ENST00000393860 ZBTB5O15062 677 aa22.48■■□□□ 1.19
RAB5C-202ENST00000393860 BMP3P12645 472 aa22.48■■□□□ 1.19
RAB5C-202ENST00000393860 MAP3K10Q02779 954 aa22.48■■□□□ 1.19
RAB5C-202ENST00000393860 QRICH1Q2TAL8 776 aa22.48■■□□□ 1.19
RAB5C-202ENST00000393860 PHF20L1A8MW92 1017 aa22.47■■□□□ 1.19
RAB5C-202ENST00000393860 ZNF202O95125 648 aa22.47■■□□□ 1.19
RAB5C-202ENST00000393860 CDC37Q16543 378 aaPredicted RBP22.47■■□□□ 1.19
RAB5C-202ENST00000393860 JAKMIP3Q5VZ66 844 aa22.47■■□□□ 1.19
RAB5C-202ENST00000393860 RBM43Q6ZSC3 357 aaKnown RBP22.47■■□□□ 1.19
RAB5C-202ENST00000393860 MTMR8Q96EF0 704 aa22.47■■□□□ 1.19
RAB5C-202ENST00000393860 TMX2Q9Y320 296 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms