RNA–Protein interactions for RNA: ENST00000393324.7

ME3-202, Transcript of malic enzyme 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME3, Length 2,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-202ENST00000393324 CNNM3Q8NE01 707 aa23.15■■□□□ 1.3
ME3-202ENST00000393324 FERMT2Q96AC1 680 aa23.15■■□□□ 1.3
ME3-202ENST00000393324 ZMYND12Q9H0C1 365 aa23.15■■□□□ 1.3
ME3-202ENST00000393324 CCDC194A0A1B0GVG4 234 aa23.14■■□□□ 1.3
ME3-202ENST00000393324 ATP2C1P98194 919 aaPredicted RBP23.14■■□□□ 1.3
ME3-202ENST00000393324 MCM7P33993 719 aa23.14■■□□□ 1.29
ME3-202ENST00000393324 IQCB1Q15051 598 aa23.14■■□□□ 1.29
ME3-202ENST00000393324 CSRNP1Q96S65 589 aa23.14■■□□□ 1.29
ME3-202ENST00000393324 KANSL2Q9H9L4 492 aa23.14■■□□□ 1.29
ME3-202ENST00000393324 CLRN2A0PK11 232 aa23.13■■□□□ 1.29
ME3-202ENST00000393324 TCP10L2B9ZVM9 353 aa23.13■■□□□ 1.29
ME3-202ENST00000393324 POLR2DO15514 142 aaKnown RBP23.13■■□□□ 1.29
ME3-202ENST00000393324 USP49Q70CQ1 688 aa23.13■■□□□ 1.29
ME3-202ENST00000393324 COL2A1P02458 1487 aaPredicted RBP23.13■■□□□ 1.29
ME3-202ENST00000393324 SMCO2A6NFE2 343 aa23.13■■□□□ 1.29
ME3-202ENST00000393324 EEF2P13639 858 aaKnown RBP23.13■■□□□ 1.29
ME3-202ENST00000393324 HSP90AA2PQ14568 343 aaPredicted RBP23.13■■□□□ 1.29
ME3-202ENST00000393324 CEP57L1Q8IYX8 460 aa23.13■■□□□ 1.29
ME3-202ENST00000393324 BRCA1P38398 1863 aaKnown RBP23.13■■□□□ 1.29
ME3-202ENST00000393324 GNA11P29992 359 aa23.12■■□□□ 1.29
ME3-202ENST00000393324 SEPT2Q15019 361 aa23.12■■□□□ 1.29
ME3-202ENST00000393324 R3HDM1Q15032 1099 aaKnown RBP23.12■■□□□ 1.29
ME3-202ENST00000393324 GPATCH4Q5T3I0 446 aaKnown RBP23.12■■□□□ 1.29
ME3-202ENST00000393324 AGBL3Q8NEM8 1001 aa23.12■■□□□ 1.29
ME3-202ENST00000393324 MKL1Q969V6 931 aa23.12■■□□□ 1.29
ME3-202ENST00000393324 TAOK3Q9H2K8 898 aa23.12■■□□□ 1.29
ME3-202ENST00000393324 C6orf50Q9HD87 102 aa23.12■■□□□ 1.29
ME3-202ENST00000393324 NYAP2Q9P242 653 aa23.12■■□□□ 1.29
ME3-202ENST00000393324 ZNF70Q9UC06 446 aaPredicted RBP23.12■■□□□ 1.29
ME3-202ENST00000393324 FER1L6Q2WGJ9 1857 aa23.12■■□□□ 1.29
ME3-202ENST00000393324 BIN1O00499 593 aa23.12■■□□□ 1.29
ME3-202ENST00000393324 CXCL9Q07325 125 aa23.12■■□□□ 1.29
ME3-202ENST00000393324 PNOCQ13519 176 aa23.12■■□□□ 1.29
ME3-202ENST00000393324 CCDC96Q2M329 555 aa23.12■■□□□ 1.29
ME3-202ENST00000393324 ABCB5Q2M3G0 1257 aa23.12■■□□□ 1.29
ME3-202ENST00000393324 TMEM179Q6ZVK1 233 aa23.12■■□□□ 1.29
ME3-202ENST00000393324 NAT10Q9H0A0 1025 aaKnown RBP23.12■■□□□ 1.29
ME3-202ENST00000393324 GDF11O95390 407 aa23.11■■□□□ 1.29
ME3-202ENST00000393324 TTBK2Q6IQ55 1244 aa23.11■■□□□ 1.29
ME3-202ENST00000393324 PDILTQ8N807 584 aa23.11■■□□□ 1.29
ME3-202ENST00000393324 CCDC39Q9UFE4 941 aa23.11■■□□□ 1.29
ME3-202ENST00000393324 TUBE1Q9UJT0 475 aa23.11■■□□□ 1.29
ME3-202ENST00000393324 VWA3AA6NCI4 1184 aa23.1■■□□□ 1.29
ME3-202ENST00000393324 GOLGA6L19H0YKK7 550 aa23.1■■□□□ 1.29
ME3-202ENST00000393324 hCG_1984214I3L0E3 225 aa23.1■■□□□ 1.29
ME3-202ENST00000393324 PTMAP06454 111 aaKnown RBP23.1■■□□□ 1.29
ME3-202ENST00000393324 DPCR1Q3MIW9 517 aa23.1■■□□□ 1.29
ME3-202ENST00000393324 KCTD1Q719H9 257 aa23.1■■□□□ 1.29
ME3-202ENST00000393324 ELOA2Q8IYF1 753 aaPredicted RBP23.1■■□□□ 1.29
ME3-202ENST00000393324 ADGRF4Q8IZF3 695 aa23.1■■□□□ 1.29
ME3-202ENST00000393324 ZNF713Q8N859 430 aaPredicted RBP23.1■■□□□ 1.29
ME3-202ENST00000393324 EPSTI1Q96J88 318 aa23.1■■□□□ 1.29
ME3-202ENST00000393324 NLRP12P59046 1061 aa23.1■■□□□ 1.29
ME3-202ENST00000393324 ICA1Q05084 483 aa23.1■■□□□ 1.29
ME3-202ENST00000393324 INF2Q27J81 1249 aa23.1■■□□□ 1.29
ME3-202ENST00000393324 JMJD4Q9H9V9 463 aa23.1■■□□□ 1.29
ME3-202ENST00000393324 BECN2A8MW95 431 aa23.09■■□□□ 1.29
ME3-202ENST00000393324 RAD21O60216 631 aa23.09■■□□□ 1.29
ME3-202ENST00000393324 SPDYE2Q495Y8 402 aa23.09■■□□□ 1.29
ME3-202ENST00000393324 SIAH1Q8IUQ4 282 aa23.09■■□□□ 1.29
ME3-202ENST00000393324 FAM151AQ8WW52 585 aa23.09■■□□□ 1.29
ME3-202ENST00000393324 JDP2Q8WYK2 163 aa23.09■■□□□ 1.29
ME3-202ENST00000393324 SYMPKQ92797 1274 aaKnown RBP23.09■■□□□ 1.29
ME3-202ENST00000393324 SERTAD1Q9UHV2 236 aa23.09■■□□□ 1.29
ME3-202ENST00000393324 HOOK1Q9UJC3 728 aaKnown RBP23.09■■□□□ 1.29
ME3-202ENST00000393324 SLC16A2P36021 539 aa23.09■■□□□ 1.29
ME3-202ENST00000393324 ESYT2A0FGR8 921 aa23.08■■□□□ 1.29
ME3-202ENST00000393324 MDM2Q00987 491 aaPredicted RBP23.08■■□□□ 1.29
ME3-202ENST00000393324 RBM26Q5T8P6 1007 aaKnown RBP23.08■■□□□ 1.29
ME3-202ENST00000393324 ZSCAN30Q86W11 494 aa23.08■■□□□ 1.29
ME3-202ENST00000393324 DHX40Q8IX18 779 aaKnown RBP23.08■■□□□ 1.29
ME3-202ENST00000393324 COA7Q96BR5 231 aa23.08■■□□□ 1.29
ME3-202ENST00000393324 VEZTQ9HBM0 779 aa23.08■■□□□ 1.29
ME3-202ENST00000393324 HERC5Q9UII4 1024 aaKnown RBP23.08■■□□□ 1.29
ME3-202ENST00000393324 PNMA6FA0A0J9YX94 578 aa23.08■■□□□ 1.28
ME3-202ENST00000393324 FOXN1O15353 648 aa23.08■■□□□ 1.28
ME3-202ENST00000393324 ARL6IP4Q66PJ3 421 aaKnown RBP23.08■■□□□ 1.28
ME3-202ENST00000393324 CIAPIN1Q6FI81 312 aa23.08■■□□□ 1.28
ME3-202ENST00000393324 ISM2Q6H9L7 571 aa23.08■■□□□ 1.28
ME3-202ENST00000393324 KRT25Q7Z3Z0 450 aa23.08■■□□□ 1.28
ME3-202ENST00000393324 C4orf32Q8N8J7 132 aa23.08■■□□□ 1.28
ME3-202ENST00000393324 MTMR14Q8NCE2 650 aa23.08■■□□□ 1.28
ME3-202ENST00000393324 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.08■■□□□ 1.28
ME3-202ENST00000393324 NFKBIEO00221 500 aa23.07■■□□□ 1.28
ME3-202ENST00000393324 GH2P01242 217 aa23.07■■□□□ 1.28
ME3-202ENST00000393324 SLC1A4P43007 532 aa23.07■■□□□ 1.28
ME3-202ENST00000393324 RRP1BQ14684 758 aaKnown RBP23.07■■□□□ 1.28
ME3-202ENST00000393324 SLFN13Q68D06 897 aa23.07■■□□□ 1.28
ME3-202ENST00000393324 DCAF4Q8WV16 495 aa23.07■■□□□ 1.28
ME3-202ENST00000393324 CNTNAP1P78357 1384 aa23.07■■□□□ 1.28
ME3-202ENST00000393324 ACTN4O43707 911 aaKnown RBP23.06■■□□□ 1.28
ME3-202ENST00000393324 JAG1P78504 1218 aa23.06■■□□□ 1.28
ME3-202ENST00000393324 POSTNQ15063 836 aa23.06■■□□□ 1.28
ME3-202ENST00000393324 IL17AQ16552 155 aa23.06■■□□□ 1.28
ME3-202ENST00000393324 PCDHA5Q9Y5H7 936 aa23.06■■□□□ 1.28
ME3-202ENST00000393324 A0A087X0B3 334 aa23.06■■□□□ 1.28
ME3-202ENST00000393324 USP17L10C9JJH3 530 aa23.06■■□□□ 1.28
ME3-202ENST00000393324 NONOQ15233 471 aaKnown RBP eCLIP23.06■■□□□ 1.28
ME3-202ENST00000393324 KANK3Q6NY19 840 aa23.06■■□□□ 1.28
ME3-202ENST00000393324 REXO1Q8N1G1 1221 aaKnown RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms