RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 SLF1Q9BQI6 1058 aa15.46■□□□□ 0.07
USP44-202ENST00000393091 SLC38A10Q9HBR0 1119 aa15.46■□□□□ 0.07
USP44-202ENST00000393091 CA12O43570 354 aa15.46■□□□□ 0.07
USP44-202ENST00000393091 CNMDO75829 334 aa15.46■□□□□ 0.07
USP44-202ENST00000393091 STAT2P52630 851 aa15.46■□□□□ 0.07
USP44-202ENST00000393091 TKFCQ3LXA3 575 aa15.46■□□□□ 0.07
USP44-202ENST00000393091 SYNE3Q6ZMZ3 975 aa15.46■□□□□ 0.07
USP44-202ENST00000393091 SHCBP1Q8NEM2 672 aa15.46■□□□□ 0.07
USP44-202ENST00000393091 SMARCC2Q8TAQ2 1214 aa15.46■□□□□ 0.07
USP44-202ENST00000393091 PARK7Q99497 189 aaKnown RBP15.46■□□□□ 0.07
USP44-202ENST00000393091 FEZ1Q99689 392 aa15.46■□□□□ 0.07
USP44-202ENST00000393091 CNTNAP5Q8WYK1 1306 aa15.46■□□□□ 0.06
USP44-202ENST00000393091 SLC1A4P43007 532 aa15.46■□□□□ 0.06
USP44-202ENST00000393091 ST3GAL1Q11201 340 aa15.46■□□□□ 0.06
USP44-202ENST00000393091 ASCC2Q9H1I8 757 aaPredicted RBP15.46■□□□□ 0.06
USP44-202ENST00000393091 PLXNA1Q9UIW2 1896 aa15.46■□□□□ 0.06
USP44-202ENST00000393091 SPDYE16A6NNV3 312 aaPredicted RBP15.45■□□□□ 0.06
USP44-202ENST00000393091 FAM83BQ5T0W9 1011 aa15.45■□□□□ 0.06
USP44-202ENST00000393091 FAM43AQ8N2R8 423 aa15.45■□□□□ 0.06
USP44-202ENST00000393091 MYH15Q9Y2K3 1946 aa15.45■□□□□ 0.06
USP44-202ENST00000393091 PDHXO00330 501 aa15.45■□□□□ 0.06
USP44-202ENST00000393091 PRPF3O43395 683 aaKnown RBP15.45■□□□□ 0.06
USP44-202ENST00000393091 BCRP11274 1271 aa15.45■□□□□ 0.06
USP44-202ENST00000393091 ME3Q16798 604 aa15.45■□□□□ 0.06
USP44-202ENST00000393091 INTS4Q96HW7 963 aaKnown RBP15.45■□□□□ 0.06
USP44-202ENST00000393091 RNF26Q9BY78 433 aaPredicted RBP15.45■□□□□ 0.06
USP44-202ENST00000393091 RABGAP1Q9Y3P9 1069 aa15.45■□□□□ 0.06
USP44-202ENST00000393091 DHX16O60231 1041 aaKnown RBP15.44■□□□□ 0.06
USP44-202ENST00000393091 TRAF1Q13077 416 aa15.44■□□□□ 0.06
USP44-202ENST00000393091 RTN1Q16799 776 aa15.44■□□□□ 0.06
USP44-202ENST00000393091 SYDE2Q5VT97 1194 aa15.44■□□□□ 0.06
USP44-202ENST00000393091 CTCFLQ8NI51 663 aaPredicted RBP15.44■□□□□ 0.06
USP44-202ENST00000393091 ZNFX1Q9P2E3 1918 aaKnown RBP15.44■□□□□ 0.06
USP44-202ENST00000393091 ZNF536O15090 1300 aa15.44■□□□□ 0.06
USP44-202ENST00000393091 VWA5AO00534 786 aa15.44■□□□□ 0.06
USP44-202ENST00000393091 CDC27P30260 824 aa15.44■□□□□ 0.06
USP44-202ENST00000393091 METAP2P50579 478 aaKnown RBP eCLIP15.44■□□□□ 0.06
USP44-202ENST00000393091 PPP1R18Q6NYC8 613 aa15.44■□□□□ 0.06
USP44-202ENST00000393091 C17orf99Q6UX52 265 aa15.44■□□□□ 0.06
USP44-202ENST00000393091 LRRC2Q9BYS8 371 aa15.44■□□□□ 0.06
USP44-202ENST00000393091 MAP3K20Q9NYL2 800 aaKnown RBP15.44■□□□□ 0.06
USP44-202ENST00000393091 PRR12Q9ULL5 1215 aa15.44■□□□□ 0.06
USP44-202ENST00000393091 KLRF2D3W0D1 207 aa15.43■□□□□ 0.06
USP44-202ENST00000393091 CYTH3O43739 400 aa15.43■□□□□ 0.06
USP44-202ENST00000393091 FMNL1O95466 1100 aaPredicted RBP15.43■□□□□ 0.06
USP44-202ENST00000393091 SCRN1Q12765 414 aa15.43■□□□□ 0.06
USP44-202ENST00000393091 NFXL1Q6ZNB6 911 aa15.43■□□□□ 0.06
USP44-202ENST00000393091 SRBD1Q8N5C6 995 aaKnown RBP15.43■□□□□ 0.06
USP44-202ENST00000393091 JMJD4Q9H9V9 463 aa15.43■□□□□ 0.06
USP44-202ENST00000393091 SH3GLB2Q9NR46 395 aa15.43■□□□□ 0.06
USP44-202ENST00000393091 GOLGA8BA8MQT2 603 aa15.43■□□□□ 0.06
USP44-202ENST00000393091 CD2BP2O95400 341 aaKnown RBP15.43■□□□□ 0.06
USP44-202ENST00000393091 HERVK_113P62684 666 aa15.43■□□□□ 0.06
USP44-202ENST00000393091 MAP2K1Q02750 393 aaPredicted RBP15.43■□□□□ 0.06
USP44-202ENST00000393091 GADL1Q6ZQY3 521 aa15.43■□□□□ 0.06
USP44-202ENST00000393091 STAG2Q8N3U4 1231 aa15.43■□□□□ 0.06
USP44-202ENST00000393091 TCEANC2Q96MN5 208 aa15.43■□□□□ 0.06
USP44-202ENST00000393091 GOLGA8AA7E2F4 631 aa15.42■□□□□ 0.06
USP44-202ENST00000393091 TLR2O60603 784 aa15.42■□□□□ 0.06
USP44-202ENST00000393091 FAM110CQ1W6H9 321 aa15.42■□□□□ 0.06
USP44-202ENST00000393091 CDKL5O76039 1030 aa15.42■□□□□ 0.06
USP44-202ENST00000393091 CTDNEP1O95476 244 aa15.42■□□□□ 0.06
USP44-202ENST00000393091 ICAM1P05362 532 aa15.42■□□□□ 0.06
USP44-202ENST00000393091 RIOX2Q8IUF8 465 aa15.42■□□□□ 0.06
USP44-202ENST00000393091 ADGRF4Q8IZF3 695 aa15.42■□□□□ 0.06
USP44-202ENST00000393091 ZIC5Q96T25 663 aa15.42■□□□□ 0.06
USP44-202ENST00000393091 ZNF214Q9UL59 606 aaPredicted RBP15.42■□□□□ 0.06
USP44-202ENST00000393091 AOC2O75106 756 aa15.42■□□□□ 0.06
USP44-202ENST00000393091 RBPJLQ9UBG7 517 aa15.42■□□□□ 0.06
USP44-202ENST00000393091 PNMA6FA0A0J9YX94 578 aa15.41■□□□□ 0.06
USP44-202ENST00000393091 TMEM232C9JQI7 657 aa15.41■□□□□ 0.06
USP44-202ENST00000393091 LARGE1O95461 756 aa15.41■□□□□ 0.06
USP44-202ENST00000393091 DGKZQ13574 1117 aa15.41■□□□□ 0.06
USP44-202ENST00000393091 P2RX7Q99572 595 aaKnown RBP15.41■□□□□ 0.06
USP44-202ENST00000393091 ZFYVE28Q9HCC9 887 aa15.41■□□□□ 0.06
USP44-202ENST00000393091 WBP1LQ9NX94 342 aa15.41■□□□□ 0.06
USP44-202ENST00000393091 ESYT2A0FGR8 921 aa15.41■□□□□ 0.06
USP44-202ENST00000393091 ZBTB5O15062 677 aa15.41■□□□□ 0.06
USP44-202ENST00000393091 ABRAQ8N0Z2 381 aa15.41■□□□□ 0.06
USP44-202ENST00000393091 TMX3Q96JJ7 454 aa15.41■□□□□ 0.06
USP44-202ENST00000393091 LOC102724159A0A0B4J2E5 919 aa15.4■□□□□ 0.06
USP44-202ENST00000393091 K7ELQ4 463 aaPredicted RBP15.4■□□□□ 0.06
USP44-202ENST00000393091 SLC25A27O95847 323 aa15.4■□□□□ 0.06
USP44-202ENST00000393091 IGHA2P01877 340 aa15.4■□□□□ 0.06
USP44-202ENST00000393091 PWP2Q15269 919 aaKnown RBP15.4■□□□□ 0.06
USP44-202ENST00000393091 SLKQ9H2G2 1235 aaPredicted RBP15.4■□□□□ 0.06
USP44-202ENST00000393091 RNF186Q9NXI6 227 aa15.4■□□□□ 0.06
USP44-202ENST00000393091 PKN1Q16512 942 aa15.4■□□□□ 0.06
USP44-202ENST00000393091 TTBK2Q6IQ55 1244 aa15.4■□□□□ 0.06
USP44-202ENST00000393091 KCTD1Q719H9 257 aa15.4■□□□□ 0.06
USP44-202ENST00000393091 NSUN7Q8NE18 718 aaKnown RBP15.4■□□□□ 0.06
USP44-202ENST00000393091 ABCB11O95342 1321 aa15.4■□□□□ 0.06
USP44-202ENST00000393091 PDIA4P13667 645 aaKnown RBP15.4■□□□□ 0.06
USP44-202ENST00000393091 ATP2B2Q01814 1243 aa15.4■□□□□ 0.06
USP44-202ENST00000393091 PFKFB3Q16875 520 aaPredicted RBP15.4■□□□□ 0.06
USP44-202ENST00000393091 NUP88Q99567 741 aaPredicted RBP15.4■□□□□ 0.06
USP44-202ENST00000393091 PLEKHA8P1O95397 391 aa15.39■□□□□ 0.05
USP44-202ENST00000393091 RASGRP2Q7LDG7 609 aa15.39■□□□□ 0.05
USP44-202ENST00000393091 ZBED4O75132 1171 aa15.39■□□□□ 0.05
USP44-202ENST00000393091 GNRH1P01148 92 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms