RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 SMARCA1P28370 1054 aa29.06■■■□□ 2.24
SMARCD3-203ENST00000392811 DCAF8Q5TAQ9 597 aa29.06■■■□□ 2.24
SMARCD3-203ENST00000392811 VSTM4Q8IW00 320 aa29.06■■■□□ 2.24
SMARCD3-203ENST00000392811 STAMQ92783 540 aa29.06■■■□□ 2.24
SMARCD3-203ENST00000392811 INTS13Q9NVM9 706 aa29.06■■■□□ 2.24
SMARCD3-203ENST00000392811 AKR1B1P15121 316 aa29.06■■■□□ 2.24
SMARCD3-203ENST00000392811 GTF2F1P35269 517 aaKnown RBP eCLIP29.06■■■□□ 2.24
SMARCD3-203ENST00000392811 CCDC12Q8WUD4 166 aaPredicted RBP29.05■■■□□ 2.24
SMARCD3-203ENST00000392811 ZNF622Q969S3 477 aaKnown RBP eCLIP29.05■■■□□ 2.24
SMARCD3-203ENST00000392811 VAT1LQ9HCJ6 419 aa29.05■■■□□ 2.24
SMARCD3-203ENST00000392811 CD44P16070 742 aaKnown RBP29.04■■■□□ 2.24
SMARCD3-203ENST00000392811 CT47A1Q5JQC4 288 aaPredicted RBP29.04■■■□□ 2.24
SMARCD3-203ENST00000392811 CDC42EP5Q6NZY7 148 aa29.04■■■□□ 2.24
SMARCD3-203ENST00000392811 HHIPL2Q6UWX4 724 aa29.04■■■□□ 2.24
SMARCD3-203ENST00000392811 TMEM60Q9H2L4 133 aa29.04■■■□□ 2.24
SMARCD3-203ENST00000392811 KCND1Q9NSA2 647 aa29.04■■■□□ 2.24
SMARCD3-203ENST00000392811 SEC63Q9UGP8 760 aaKnown RBP29.04■■■□□ 2.24
SMARCD3-203ENST00000392811 PDHBP11177 359 aa29.04■■■□□ 2.24
SMARCD3-203ENST00000392811 ZNF772Q68DY9 489 aaPredicted RBP29.04■■■□□ 2.24
SMARCD3-203ENST00000392811 CCAR2Q8N163 923 aaKnown RBP29.04■■■□□ 2.24
SMARCD3-203ENST00000392811 PIGSQ96S52 555 aa29.04■■■□□ 2.24
SMARCD3-203ENST00000392811 MYH8P13535 1937 aa29.04■■■□□ 2.24
SMARCD3-203ENST00000392811 IGKV6D-41A0A0C4DH26 115 aa29.03■■■□□ 2.24
SMARCD3-203ENST00000392811 CDK11BP21127 795 aaKnown RBP29.03■■■□□ 2.24
SMARCD3-203ENST00000392811 CDC25AP30304 524 aa29.03■■■□□ 2.24
SMARCD3-203ENST00000392811 CUL4BQ13620 913 aa29.03■■■□□ 2.24
SMARCD3-203ENST00000392811 TEKT1Q969V4 418 aa29.03■■■□□ 2.24
SMARCD3-203ENST00000392811 MTRQ99707 1265 aa29.03■■■□□ 2.24
SMARCD3-203ENST00000392811 UBA5Q9GZZ9 404 aa29.03■■■□□ 2.24
SMARCD3-203ENST00000392811 SAMSN1Q9NSI8 373 aaKnown RBP29.03■■■□□ 2.24
SMARCD3-203ENST00000392811 SERPINB13Q9UIV8 391 aa29.03■■■□□ 2.24
SMARCD3-203ENST00000392811 SMCO2A6NFE2 343 aa29.03■■■□□ 2.24
SMARCD3-203ENST00000392811 RIOK3O14730 519 aaKnown RBP29.03■■■□□ 2.24
SMARCD3-203ENST00000392811 PTPN21Q16825 1174 aa29.03■■■□□ 2.24
SMARCD3-203ENST00000392811 APOBEC3HQ6NTF7 200 aaKnown RBP29.03■■■□□ 2.24
SMARCD3-203ENST00000392811 DTHD1Q6ZMT9 781 aa29.03■■■□□ 2.24
SMARCD3-203ENST00000392811 LRRC47Q8N1G4 583 aaKnown RBP29.03■■■□□ 2.24
SMARCD3-203ENST00000392811 BLZF1Q9H2G9 400 aa29.03■■■□□ 2.24
SMARCD3-203ENST00000392811 DBNDD1Q9H9R9 158 aa29.03■■■□□ 2.24
SMARCD3-203ENST00000392811 C6orf50Q9HD87 102 aa29.03■■■□□ 2.24
SMARCD3-203ENST00000392811 FRMPD2Q68DX3 1309 aaPredicted RBP29.02■■■□□ 2.24
SMARCD3-203ENST00000392811 TXLNAP40222 546 aa29.02■■■□□ 2.24
SMARCD3-203ENST00000392811 RIOX1Q9H6W3 641 aa29.02■■■□□ 2.24
SMARCD3-203ENST00000392811 TRMT1Q9NXH9 659 aaKnown RBP29.02■■■□□ 2.24
SMARCD3-203ENST00000392811 EIF6P56537 245 aaKnown RBP29.01■■■□□ 2.24
SMARCD3-203ENST00000392811 KLHL10Q6JEL2 608 aa29.01■■■□□ 2.24
SMARCD3-203ENST00000392811 KRT25Q7Z3Z0 450 aa29.01■■■□□ 2.24
SMARCD3-203ENST00000392811 C2CD5Q86YS7 1000 aa29.01■■■□□ 2.24
SMARCD3-203ENST00000392811 CLEC10AQ8IUN9 316 aa29.01■■■□□ 2.24
SMARCD3-203ENST00000392811 SMYD4Q8IYR2 804 aaPredicted RBP29.01■■■□□ 2.24
SMARCD3-203ENST00000392811 KCNQ5Q9NR82 932 aa29.01■■■□□ 2.24
SMARCD3-203ENST00000392811 SWAP70Q9UH65 585 aa29.01■■■□□ 2.24
SMARCD3-203ENST00000392811 PPP1R3GB7ZBB8 358 aa29.01■■■□□ 2.23
SMARCD3-203ENST00000392811 GTPBP6O43824 516 aaPredicted RBP29.01■■■□□ 2.23
SMARCD3-203ENST00000392811 GNA11P29992 359 aa29.01■■■□□ 2.23
SMARCD3-203ENST00000392811 RBM10P98175 930 aaKnown RBP29.01■■■□□ 2.23
SMARCD3-203ENST00000392811 NYAP1Q6ZVC0 841 aa29.01■■■□□ 2.23
SMARCD3-203ENST00000392811 SYNRGQ9UMZ2 1314 aa29■■■□□ 2.23
SMARCD3-203ENST00000392811 KARSQ15046 597 aaKnown RBP29■■■□□ 2.23
SMARCD3-203ENST00000392811 SHMT1P34896 483 aa28.99■■■□□ 2.23
SMARCD3-203ENST00000392811 SOGA3Q5TF21 947 aa28.99■■■□□ 2.23
SMARCD3-203ENST00000392811 SPATA1Q5VX52 437 aa28.99■■■□□ 2.23
SMARCD3-203ENST00000392811 PODNQ7Z5L7 613 aa28.99■■■□□ 2.23
SMARCD3-203ENST00000392811 MYO3BQ8WXR4 1341 aa28.99■■■□□ 2.23
SMARCD3-203ENST00000392811 LAD1O00515 517 aa28.99■■■□□ 2.23
SMARCD3-203ENST00000392811 NRDCO43847 1150 aa28.99■■■□□ 2.23
SMARCD3-203ENST00000392811 CRKP46108 304 aa28.99■■■□□ 2.23
SMARCD3-203ENST00000392811 STX17P56962 302 aa28.99■■■□□ 2.23
SMARCD3-203ENST00000392811 NONOQ15233 471 aaKnown RBP eCLIP28.99■■■□□ 2.23
SMARCD3-203ENST00000392811 ASPRV1Q53RT3 343 aa28.99■■■□□ 2.23
SMARCD3-203ENST00000392811 E4F1Q66K89 784 aaPredicted RBP28.99■■■□□ 2.23
SMARCD3-203ENST00000392811 PP2D1A8MPX8 630 aa28.98■■■□□ 2.23
SMARCD3-203ENST00000392811 SNHG28P0DPA3 235 aa28.98■■■□□ 2.23
SMARCD3-203ENST00000392811 STAT6P42226 847 aa28.98■■■□□ 2.23
SMARCD3-203ENST00000392811 KCNJ6P48051 423 aa28.98■■■□□ 2.23
SMARCD3-203ENST00000392811 NFIAQ12857 509 aa28.98■■■□□ 2.23
SMARCD3-203ENST00000392811 PTPN14Q15678 1187 aa28.98■■■□□ 2.23
SMARCD3-203ENST00000392811 CEP135Q66GS9 1140 aa28.98■■■□□ 2.23
SMARCD3-203ENST00000392811 DISC1Q9NRI5 854 aa28.98■■■□□ 2.23
SMARCD3-203ENST00000392811 TTLL1O95922 423 aa28.98■■■□□ 2.23
SMARCD3-203ENST00000392811 PRPHP41219 470 aa28.98■■■□□ 2.23
SMARCD3-203ENST00000392811 TSC1Q92574 1164 aa28.98■■■□□ 2.23
SMARCD3-203ENST00000392811 ESYT2A0FGR8 921 aa28.96■■■□□ 2.23
SMARCD3-203ENST00000392811 HLA-DOAP06340 250 aa28.96■■■□□ 2.23
SMARCD3-203ENST00000392811 LETM2Q2VYF4 491 aa28.96■■■□□ 2.23
SMARCD3-203ENST00000392811 TBX2Q13207 712 aaPredicted RBP28.96■■■□□ 2.23
SMARCD3-203ENST00000392811 STYK1Q6J9G0 422 aa28.96■■■□□ 2.23
SMARCD3-203ENST00000392811 ZDHHC15Q96MV8 337 aa28.96■■■□□ 2.23
SMARCD3-203ENST00000392811 GPCPD1Q9NPB8 672 aa28.96■■■□□ 2.23
SMARCD3-203ENST00000392811 PAXBP1Q9Y5B6 917 aa28.96■■■□□ 2.23
SMARCD3-203ENST00000392811 C10orf71Q711Q0 1435 aa28.95■■■□□ 2.23
SMARCD3-203ENST00000392811 H0YIN7 160 aa28.95■■■□□ 2.23
SMARCD3-203ENST00000392811 hCG_1984214I3L0E3 225 aa28.95■■■□□ 2.23
SMARCD3-203ENST00000392811 CCNT1O60563 726 aaKnown RBP28.95■■■□□ 2.23
SMARCD3-203ENST00000392811 GOLGA8FQ08AF8 430 aa28.95■■■□□ 2.23
SMARCD3-203ENST00000392811 GOLGA8DPQ0D2H9 430 aa28.95■■■□□ 2.23
SMARCD3-203ENST00000392811 NAALADL2Q58DX5 795 aa28.95■■■□□ 2.23
SMARCD3-203ENST00000392811 KIAA0825Q8IV33 1275 aa28.95■■■□□ 2.23
SMARCD3-203ENST00000392811 ZFPM1Q8IX07 1006 aa28.95■■■□□ 2.23
SMARCD3-203ENST00000392811 ZNF713Q8N859 430 aaPredicted RBP28.95■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms