RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 TMEM232C9JQI7 657 aa7.91□□□□□ -1.14
UBBP1-201ENST00000392399 ZBED4O75132 1171 aa7.91□□□□□ -1.14
UBBP1-201ENST00000392399 CALM1P0DP23 149 aa7.91□□□□□ -1.14
UBBP1-201ENST00000392399 CALM2P0DP24 149 aa7.91□□□□□ -1.14
UBBP1-201ENST00000392399 CALM3P0DP25 149 aa7.91□□□□□ -1.14
UBBP1-201ENST00000392399 HOXD10P28358 340 aa7.91□□□□□ -1.14
UBBP1-201ENST00000392399 PRMT2P55345 433 aa7.91□□□□□ -1.14
UBBP1-201ENST00000392399 ANTXR2P58335 489 aa7.91□□□□□ -1.14
UBBP1-201ENST00000392399 ERVK-9P63128 1117 aa7.91□□□□□ -1.14
UBBP1-201ENST00000392399 ERVK-24P63145 666 aa7.91□□□□□ -1.14
UBBP1-201ENST00000392399 LACTBP83111 547 aaPredicted RBP7.91□□□□□ -1.14
UBBP1-201ENST00000392399 ZNF543Q08ER8 600 aa7.91□□□□□ -1.14
UBBP1-201ENST00000392399 PKN2Q16513 984 aaKnown RBP7.91□□□□□ -1.14
UBBP1-201ENST00000392399 ADCK5Q3MIX3 580 aa7.91□□□□□ -1.14
UBBP1-201ENST00000392399 ASPRV1Q53RT3 343 aa7.91□□□□□ -1.14
UBBP1-201ENST00000392399 BLOC1S2Q6QNY1 142 aa7.91□□□□□ -1.14
UBBP1-201ENST00000392399 BTNL9Q6UXG8 535 aa7.91□□□□□ -1.14
UBBP1-201ENST00000392399 CATIPQ7Z7H3 387 aa7.91□□□□□ -1.14
UBBP1-201ENST00000392399 SGMS1Q86VZ5 419 aa7.91□□□□□ -1.14
UBBP1-201ENST00000392399 ANKRD13CQ8N6S4 541 aa7.91□□□□□ -1.14
UBBP1-201ENST00000392399 IL27Q8NEV9 243 aa7.91□□□□□ -1.14
UBBP1-201ENST00000392399 IL17RAQ96F46 866 aa7.91□□□□□ -1.14
UBBP1-201ENST00000392399 JAKMIP1Q96N16 626 aaKnown RBP7.91□□□□□ -1.14
UBBP1-201ENST00000392399 UPF2Q9HAU5 1272 aaKnown RBP7.91□□□□□ -1.14
UBBP1-201ENST00000392399 ZSWIM6Q9HCJ5 1215 aa7.91□□□□□ -1.14
UBBP1-201ENST00000392399 CPA4Q9UI42 421 aa7.91□□□□□ -1.14
UBBP1-201ENST00000392399 PNMA2Q9UL42 364 aa7.91□□□□□ -1.14
UBBP1-201ENST00000392399 PCDHB13Q9Y5F0 798 aa7.91□□□□□ -1.14
UBBP1-201ENST00000392399 CCDC69A6NI79 296 aa7.9□□□□□ -1.14
UBBP1-201ENST00000392399 VWA5AO00534 786 aa7.9□□□□□ -1.14
UBBP1-201ENST00000392399 SH2B2O14492 632 aaPredicted RBP7.9□□□□□ -1.14
UBBP1-201ENST00000392399 ATP2A1O14983 1001 aa7.9□□□□□ -1.14
UBBP1-201ENST00000392399 SLC25A27O95847 323 aa7.9□□□□□ -1.14
UBBP1-201ENST00000392399 PARP1P09874 1014 aaKnown RBP7.9□□□□□ -1.14
UBBP1-201ENST00000392399 MAPK4P31152 587 aa7.9□□□□□ -1.14
UBBP1-201ENST00000392399 COPB2P35606 906 aa7.9□□□□□ -1.14
UBBP1-201ENST00000392399 OAZ1P54368 228 aa7.9□□□□□ -1.14
UBBP1-201ENST00000392399 FCGRTP55899 365 aa7.9□□□□□ -1.14
UBBP1-201ENST00000392399 FGD1P98174 961 aa7.9□□□□□ -1.14
UBBP1-201ENST00000392399 TROAPQ12815 778 aa7.9□□□□□ -1.14
UBBP1-201ENST00000392399 IKQ13123 557 aaPredicted RBP7.9□□□□□ -1.14
UBBP1-201ENST00000392399 PPP2R5BQ15173 497 aa7.9□□□□□ -1.14
UBBP1-201ENST00000392399 CCDC96Q2M329 555 aa7.9□□□□□ -1.14
UBBP1-201ENST00000392399 SYNE3Q6ZMZ3 975 aa7.9□□□□□ -1.14
UBBP1-201ENST00000392399 RUFY3Q7L099 469 aa7.9□□□□□ -1.14
UBBP1-201ENST00000392399 CHST3Q7LGC8 479 aa7.9□□□□□ -1.14
UBBP1-201ENST00000392399 CTU1Q7Z7A3 348 aaKnown RBP7.9□□□□□ -1.14
UBBP1-201ENST00000392399 CCAR1Q8IX12 1150 aaKnown RBP7.9□□□□□ -1.14
UBBP1-201ENST00000392399 SHCBP1Q8NEM2 672 aa7.9□□□□□ -1.14
UBBP1-201ENST00000392399 ATG4CQ96DT6 458 aa7.9□□□□□ -1.14
UBBP1-201ENST00000392399 NUP88Q99567 741 aaPredicted RBP7.9□□□□□ -1.14
UBBP1-201ENST00000392399 EFCC1Q9HA90 598 aa7.9□□□□□ -1.14
UBBP1-201ENST00000392399 LY9Q9HBG7 655 aa7.9□□□□□ -1.14
UBBP1-201ENST00000392399 SLC38A10Q9HBR0 1119 aa7.9□□□□□ -1.14
UBBP1-201ENST00000392399 FBXO28Q9NVF7 368 aa7.9□□□□□ -1.14
UBBP1-201ENST00000392399 CTDP1Q9Y5B0 961 aaPredicted RBP7.9□□□□□ -1.14
UBBP1-201ENST00000392399 CYP46A1Q9Y6A2 500 aa7.9□□□□□ -1.14
UBBP1-201ENST00000392399 MYH4Q9Y623 1939 aa7.9□□□□□ -1.15
UBBP1-201ENST00000392399 STRNO43815 780 aa7.89□□□□□ -1.15
UBBP1-201ENST00000392399 CNMDO75829 334 aa7.89□□□□□ -1.15
UBBP1-201ENST00000392399 DDAH1O94760 285 aa7.89□□□□□ -1.15
UBBP1-201ENST00000392399 FMNL1O95466 1100 aaPredicted RBP7.89□□□□□ -1.15
UBBP1-201ENST00000392399 SEC24BO95487 1268 aa7.89□□□□□ -1.15
UBBP1-201ENST00000392399 CASTP20810 708 aaKnown RBP7.89□□□□□ -1.15
UBBP1-201ENST00000392399 RPS6KB1P23443 525 aa7.89□□□□□ -1.15
UBBP1-201ENST00000392399 SMARCA1P28370 1054 aa7.89□□□□□ -1.15
UBBP1-201ENST00000392399 KIF5BP33176 963 aa7.89□□□□□ -1.15
UBBP1-201ENST00000392399 STAT3P40763 770 aa7.89□□□□□ -1.15
UBBP1-201ENST00000392399 PSMC4P43686 418 aa7.89□□□□□ -1.15
UBBP1-201ENST00000392399 GNAQP50148 359 aa7.89□□□□□ -1.15
UBBP1-201ENST00000392399 RCAN1P53805 252 aa7.89□□□□□ -1.15
UBBP1-201ENST00000392399 Q3C1V9 767 aa7.89□□□□□ -1.15
UBBP1-201ENST00000392399 NFXL1Q6ZNB6 911 aa7.89□□□□□ -1.15
UBBP1-201ENST00000392399 KCTD1Q719H9 257 aa7.89□□□□□ -1.15
UBBP1-201ENST00000392399 KIFC2Q96AC6 838 aa7.89□□□□□ -1.15
UBBP1-201ENST00000392399 COA7Q96BR5 231 aa7.89□□□□□ -1.15
UBBP1-201ENST00000392399 LZTS2Q9BRK4 669 aa7.89□□□□□ -1.15
UBBP1-201ENST00000392399 PAGR1Q9BTK6 254 aa7.89□□□□□ -1.15
UBBP1-201ENST00000392399 AGXT2Q9BYV1 514 aa7.89□□□□□ -1.15
UBBP1-201ENST00000392399 SPATC1LQ9H0A9 340 aa7.89□□□□□ -1.15
UBBP1-201ENST00000392399 MROH8Q9H579 483 aa7.89□□□□□ -1.15
UBBP1-201ENST00000392399 TXNRD2Q9NNW7 524 aa7.89□□□□□ -1.15
UBBP1-201ENST00000392399 BTBD7Q9P203 1132 aa7.89□□□□□ -1.15
UBBP1-201ENST00000392399 PRR12Q9ULL5 1215 aa7.89□□□□□ -1.15
UBBP1-201ENST00000392399 ISY1Q9ULR0 285 aaKnown RBP7.89□□□□□ -1.15
UBBP1-201ENST00000392399 MTMR7Q9Y216 660 aa7.89□□□□□ -1.15
UBBP1-201ENST00000392399 SLC12A7Q9Y666 1083 aa7.89□□□□□ -1.15
UBBP1-201ENST00000392399 PALM3A6NDB9 673 aaPredicted RBP7.88□□□□□ -1.15
UBBP1-201ENST00000392399 TTLL13PA6NNM8 815 aa7.88□□□□□ -1.15
UBBP1-201ENST00000392399 KLRF2D3W0D1 207 aa7.88□□□□□ -1.15
UBBP1-201ENST00000392399 TNPO2O14787 897 aaKnown RBP7.88□□□□□ -1.15
UBBP1-201ENST00000392399 RBM25P49756 843 aaKnown RBP7.88□□□□□ -1.15
UBBP1-201ENST00000392399 EVCP57679 992 aa7.88□□□□□ -1.15
UBBP1-201ENST00000392399 TRAF1Q13077 416 aa7.88□□□□□ -1.15
UBBP1-201ENST00000392399 GRM4Q14833 912 aa7.88□□□□□ -1.15
UBBP1-201ENST00000392399 TMEM132BQ14DG7 1078 aa7.88□□□□□ -1.15
UBBP1-201ENST00000392399 ANKRD1Q15327 319 aa7.88□□□□□ -1.15
UBBP1-201ENST00000392399 TKFCQ3LXA3 575 aa7.88□□□□□ -1.15
UBBP1-201ENST00000392399 SYDE2Q5VT97 1194 aa7.88□□□□□ -1.15
UBBP1-201ENST00000392399 POTEEQ6S8J3 1075 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms