RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 SLFN12Q8IYM2 578 aa3.31□□□□□ -1.88
RNU6-239P-201ENST00000390990 DAGLBQ8NCG7 672 aa3.31□□□□□ -1.88
RNU6-239P-201ENST00000390990 LINC00116Q8NCU8 138 aa3.31□□□□□ -1.88
RNU6-239P-201ENST00000390990 FNIP1Q8TF40 1166 aa3.31□□□□□ -1.88
RNU6-239P-201ENST00000390990 ZNF526Q8TF50 670 aaPredicted RBP3.31□□□□□ -1.88
RNU6-239P-201ENST00000390990 MRIQ9BWK5 157 aa3.31□□□□□ -1.88
RNU6-239P-201ENST00000390990 PRDM14Q9GZV8 571 aa3.31□□□□□ -1.88
RNU6-239P-201ENST00000390990 MIR1-1HGQ9H1L0 117 aa3.31□□□□□ -1.88
RNU6-239P-201ENST00000390990 SPG7Q9UQ90 795 aa3.31□□□□□ -1.88
RNU6-239P-201ENST00000390990 NOBOXO60393 691 aa3.3□□□□□ -1.88
RNU6-239P-201ENST00000390990 SYPP08247 313 aa3.3□□□□□ -1.88
RNU6-239P-201ENST00000390990 C6P13671 934 aa3.3□□□□□ -1.88
RNU6-239P-201ENST00000390990 ZNF20P17024 532 aa3.3□□□□□ -1.88
RNU6-239P-201ENST00000390990 PRKCAP17252 672 aa3.3□□□□□ -1.88
RNU6-239P-201ENST00000390990 FBLN1P23142 703 aa3.3□□□□□ -1.88
RNU6-239P-201ENST00000390990 MAPK1P28482 360 aa3.3□□□□□ -1.88
RNU6-239P-201ENST00000390990 ARL4AP40617 200 aa3.3□□□□□ -1.88
RNU6-239P-201ENST00000390990 PCBP3P57721 371 aaKnown RBP3.3□□□□□ -1.88
RNU6-239P-201ENST00000390990 ZNF200P98182 395 aaPredicted RBP3.3□□□□□ -1.88
RNU6-239P-201ENST00000390990 LAPTM5Q13571 262 aa3.3□□□□□ -1.88
RNU6-239P-201ENST00000390990 PLEKHN1Q494U1 663 aaPredicted RBP3.3□□□□□ -1.88
RNU6-239P-201ENST00000390990 ALG1LQ6GMV1 187 aa3.3□□□□□ -1.88
RNU6-239P-201ENST00000390990 TMC3Q7Z5M5 1100 aa3.3□□□□□ -1.88
RNU6-239P-201ENST00000390990 Q8N1X5 172 aa3.3□□□□□ -1.88
RNU6-239P-201ENST00000390990 NLGN1Q8N2Q7 840 aa3.3□□□□□ -1.88
RNU6-239P-201ENST00000390990 ZNF655Q8N720 491 aaPredicted RBP3.3□□□□□ -1.88
RNU6-239P-201ENST00000390990 C1QTNF3Q9BXJ4 246 aa3.3□□□□□ -1.88
RNU6-239P-201ENST00000390990 ASCC2Q9H1I8 757 aaPredicted RBP3.3□□□□□ -1.88
RNU6-239P-201ENST00000390990 TNFRSF12AQ9NP84 129 aa3.3□□□□□ -1.88
RNU6-239P-201ENST00000390990 TNFRSF10DQ9UBN6 386 aa3.3□□□□□ -1.88
RNU6-239P-201ENST00000390990 PLA2G2DQ9UNK4 145 aa3.3□□□□□ -1.88
RNU6-239P-201ENST00000390990 GPR55Q9Y2T6 319 aaPredicted RBP3.3□□□□□ -1.88
RNU6-239P-201ENST00000390990 SSU72P8A0A1W2PR75 194 aa3.29□□□□□ -1.88
RNU6-239P-201ENST00000390990 WTIPA6NIX2 430 aaPredicted RBP3.29□□□□□ -1.88
RNU6-239P-201ENST00000390990 DNAJA2O60884 412 aa3.29□□□□□ -1.88
RNU6-239P-201ENST00000390990 MSL3P1P0C860 447 aa3.29□□□□□ -1.88
RNU6-239P-201ENST00000390990 ATF2P15336 505 aa3.29□□□□□ -1.88
RNU6-239P-201ENST00000390990 PFKLP17858 780 aa3.29□□□□□ -1.88
RNU6-239P-201ENST00000390990 FOXO4P98177 505 aa3.29□□□□□ -1.88
RNU6-239P-201ENST00000390990 CYP4F8P98187 520 aa3.29□□□□□ -1.88
RNU6-239P-201ENST00000390990 FMR1Q06787 632 aaKnown RBP eCLIP3.29□□□□□ -1.88
RNU6-239P-201ENST00000390990 DLX2Q07687 328 aaPredicted RBP3.29□□□□□ -1.88
RNU6-239P-201ENST00000390990 TMEM62Q0P6H9 643 aa3.29□□□□□ -1.88
RNU6-239P-201ENST00000390990 SNW1Q13573 536 aaKnown RBP3.29□□□□□ -1.88
RNU6-239P-201ENST00000390990 SAPCD2Q86UD0 394 aa3.29□□□□□ -1.88
RNU6-239P-201ENST00000390990 SLCO6A1Q86UG4 719 aa3.29□□□□□ -1.88
RNU6-239P-201ENST00000390990 ZFPM1Q8IX07 1006 aa3.29□□□□□ -1.88
RNU6-239P-201ENST00000390990 CCDC74BQ96LY2 380 aa3.29□□□□□ -1.88
RNU6-239P-201ENST00000390990 C8orf49Q96NF6 230 aa3.29□□□□□ -1.88
RNU6-239P-201ENST00000390990 KIF2CQ99661 725 aa3.29□□□□□ -1.88
RNU6-239P-201ENST00000390990 C1orf115Q9H7X2 142 aa3.29□□□□□ -1.88
RNU6-239P-201ENST00000390990 BIN2Q9UBW5 565 aaPredicted RBP3.29□□□□□ -1.88
RNU6-239P-201ENST00000390990 ACSL6Q9UKU0 697 aa3.29□□□□□ -1.88
RNU6-239P-201ENST00000390990 MINPP1Q9UNW1 487 aa3.29□□□□□ -1.88
RNU6-239P-201ENST00000390990 TLR6Q9Y2C9 796 aa3.29□□□□□ -1.88
RNU6-239P-201ENST00000390990 HCFC2Q9Y5Z7 792 aa3.29□□□□□ -1.88
RNU6-239P-201ENST00000390990 TAF6LQ9Y6J9 622 aa3.29□□□□□ -1.88
RNU6-239P-201ENST00000390990 SH3D21A4FU49 640 aa3.28□□□□□ -1.88
RNU6-239P-201ENST00000390990 ACVRL1P37023 503 aa3.28□□□□□ -1.88
RNU6-239P-201ENST00000390990 MAPKAPK2P49137 400 aa3.28□□□□□ -1.88
RNU6-239P-201ENST00000390990 HTRA3P83110 453 aa3.28□□□□□ -1.88
RNU6-239P-201ENST00000390990 NUP43Q8NFH3 380 aa3.28□□□□□ -1.88
RNU6-239P-201ENST00000390990 FCRL2Q96LA5 508 aaPredicted RBP3.28□□□□□ -1.88
RNU6-239P-201ENST00000390990 LNPKQ9C0E8 428 aa3.28□□□□□ -1.88
RNU6-239P-201ENST00000390990 REV1Q9UBZ9 1251 aa3.28□□□□□ -1.88
RNU6-239P-201ENST00000390990 KLHL3Q9UH77 587 aa3.28□□□□□ -1.88
RNU6-239P-201ENST00000390990 PMF1-BGLAPU3KQ54 211 aa3.28□□□□□ -1.88
RNU6-239P-201ENST00000390990 PRAMEF1O95521 474 aa3.27□□□□□ -1.89
RNU6-239P-201ENST00000390990 TACR2P21452 398 aa3.27□□□□□ -1.89
RNU6-239P-201ENST00000390990 GDF5P43026 501 aa3.27□□□□□ -1.89
RNU6-239P-201ENST00000390990 NBPF9Q3BBW0 867 aa3.27□□□□□ -1.89
RNU6-239P-201ENST00000390990 CRB2Q5IJ48 1285 aa3.27□□□□□ -1.89
RNU6-239P-201ENST00000390990 ZC3H14Q6PJT7 736 aaKnown RBP3.27□□□□□ -1.89
RNU6-239P-201ENST00000390990 BNC2Q6ZN30 1099 aaPredicted RBP3.27□□□□□ -1.89
RNU6-239P-201ENST00000390990 SPRED1Q7Z699 444 aa3.27□□□□□ -1.89
RNU6-239P-201ENST00000390990 TMEM52Q8NDY8 209 aa3.27□□□□□ -1.89
RNU6-239P-201ENST00000390990 LOXL4Q96JB6 756 aa3.27□□□□□ -1.89
RNU6-239P-201ENST00000390990 SLITRK6Q9H5Y7 841 aa3.27□□□□□ -1.89
RNU6-239P-201ENST00000390990 ERVK13-1Q9NX77 482 aa3.27□□□□□ -1.89
RNU6-239P-201ENST00000390990 IMPACTQ9P2X3 320 aa3.27□□□□□ -1.89
RNU6-239P-201ENST00000390990 PRR36Q9H6K5 1346 aa3.26□□□□□ -1.89
RNU6-239P-201ENST00000390990 A0A1W2PQ45 241 aaPredicted RBP3.26□□□□□ -1.89
RNU6-239P-201ENST00000390990 A0A1W2PQY0 241 aa3.26□□□□□ -1.89
RNU6-239P-201ENST00000390990 FAM221AA4D161 298 aa3.26□□□□□ -1.89
RNU6-239P-201ENST00000390990 UBOX5O94941 541 aa3.26□□□□□ -1.89
RNU6-239P-201ENST00000390990 GBP1P32455 592 aa3.26□□□□□ -1.89
RNU6-239P-201ENST00000390990 MVKQ03426 396 aa3.26□□□□□ -1.89
RNU6-239P-201ENST00000390990 NR1I3Q14994 352 aa3.26□□□□□ -1.89
RNU6-239P-201ENST00000390990 TARBP2Q15633 366 aaKnown RBP3.26□□□□□ -1.89
RNU6-239P-201ENST00000390990 PHACTR4Q8IZ21 702 aa3.26□□□□□ -1.89
RNU6-239P-201ENST00000390990 CARFQ8N187 725 aa3.26□□□□□ -1.89
RNU6-239P-201ENST00000390990 SAMD11Q96NU1 681 aa3.26□□□□□ -1.89
RNU6-239P-201ENST00000390990 JMJD8Q96S16 334 aa3.26□□□□□ -1.89
RNU6-239P-201ENST00000390990 POLR3KQ9Y2Y1 108 aaPredicted RBP3.26□□□□□ -1.89
RNU6-239P-201ENST00000390990 CYR61O00622 381 aa3.25□□□□□ -1.89
RNU6-239P-201ENST00000390990 RGS13O14921 159 aa3.25□□□□□ -1.89
RNU6-239P-201ENST00000390990 HTR3BO95264 441 aa3.25□□□□□ -1.89
RNU6-239P-201ENST00000390990 EIF4BP23588 611 aaKnown RBP3.25□□□□□ -1.89
RNU6-239P-201ENST00000390990 MC3RP41968 323 aa3.25□□□□□ -1.89
RNU6-239P-201ENST00000390990 GJA9P57773 515 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms