RNA–Protein interactions for RNA: ENST00000390625.3

IGHV3-49-201, Transcript of immunoglobulin heavy variable 3-49, humanhuman

APPRIS P1 BASIC

Gene IGHV3-49, Length 439 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-49-201ENST00000390625 ADD2P35612 726 aa16.52■□□□□ 0.24
IGHV3-49-201ENST00000390625 CCDC85BQ15834 202 aaPredicted RBP16.52■□□□□ 0.24
IGHV3-49-201ENST00000390625 ANKRD33Q7Z3H0 272 aa16.52■□□□□ 0.24
IGHV3-49-201ENST00000390625 FTSJ3Q8IY81 847 aaKnown RBP16.52■□□□□ 0.24
IGHV3-49-201ENST00000390625 TIFAQ96CG3 184 aa16.52■□□□□ 0.24
IGHV3-49-201ENST00000390625 PBX4Q9BYU1 374 aa16.52■□□□□ 0.24
IGHV3-49-201ENST00000390625 PPP1R12CQ9BZL4 782 aa16.52■□□□□ 0.24
IGHV3-49-201ENST00000390625 STARD7Q9NQZ5 370 aa16.52■□□□□ 0.24
IGHV3-49-201ENST00000390625 ZHX1Q9UKY1 873 aaPredicted RBP16.52■□□□□ 0.24
IGHV3-49-201ENST00000390625 NCOR1O75376 2440 aa16.52■□□□□ 0.24
IGHV3-49-201ENST00000390625 BDP1A6H8Y1 2624 aa16.51■□□□□ 0.23
IGHV3-49-201ENST00000390625 UMODL1Q5DID0 1318 aa16.51■□□□□ 0.23
IGHV3-49-201ENST00000390625 CTAGE5O15320 804 aa16.51■□□□□ 0.23
IGHV3-49-201ENST00000390625 SLC25A27O95847 323 aa16.51■□□□□ 0.23
IGHV3-49-201ENST00000390625 TIMP1P01033 207 aa16.51■□□□□ 0.23
IGHV3-49-201ENST00000390625 AKR1A1P14550 325 aa16.51■□□□□ 0.23
IGHV3-49-201ENST00000390625 KCTD2Q14681 263 aa16.51■□□□□ 0.23
IGHV3-49-201ENST00000390625 TJAP1Q5JTD0 557 aa16.51■□□□□ 0.23
IGHV3-49-201ENST00000390625 CTR9Q6PD62 1173 aa16.51■□□□□ 0.23
IGHV3-49-201ENST00000390625 C16orf86Q6ZW13 317 aa16.51■□□□□ 0.23
IGHV3-49-201ENST00000390625 CXXC1Q9P0U4 656 aaPredicted RBP16.51■□□□□ 0.23
IGHV3-49-201ENST00000390625 SWAP70Q9UH65 585 aa16.51■□□□□ 0.23
IGHV3-49-201ENST00000390625 XIRP2A4UGR9 3374 aa16.51■□□□□ 0.23
IGHV3-49-201ENST00000390625 ROBO3Q96MS0 1386 aa16.51■□□□□ 0.23
IGHV3-49-201ENST00000390625 DNAJC25-GNG10A0A024R161 153 aa16.5■□□□□ 0.23
IGHV3-49-201ENST00000390625 CDK7P50613 346 aa16.5■□□□□ 0.23
IGHV3-49-201ENST00000390625 TTF1Q15361 905 aaPredicted RBP16.5■□□□□ 0.23
IGHV3-49-201ENST00000390625 TMEM63BQ5T3F8 832 aa16.5■□□□□ 0.23
IGHV3-49-201ENST00000390625 RASIP1Q5U651 963 aa16.5■□□□□ 0.23
IGHV3-49-201ENST00000390625 CHMP4CQ96CF2 233 aa16.5■□□□□ 0.23
IGHV3-49-201ENST00000390625 NECAB3Q96P71 396 aaPredicted RBP16.5■□□□□ 0.23
IGHV3-49-201ENST00000390625 PUS7LQ9H0K6 701 aaKnown RBP16.5■□□□□ 0.23
IGHV3-49-201ENST00000390625 TMEM265A0A087WTH1 108 aa16.49■□□□□ 0.23
IGHV3-49-201ENST00000390625 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.49■□□□□ 0.23
IGHV3-49-201ENST00000390625 TNFRSF10AO00220 468 aa16.49■□□□□ 0.23
IGHV3-49-201ENST00000390625 CYP2C18P33260 490 aa16.49■□□□□ 0.23
IGHV3-49-201ENST00000390625 BEX3Q00994 111 aa16.49■□□□□ 0.23
IGHV3-49-201ENST00000390625 SNRNP48Q6IEG0 339 aaKnown RBP16.49■□□□□ 0.23
IGHV3-49-201ENST00000390625 ZNF365Q70YC5 407 aa16.49■□□□□ 0.23
IGHV3-49-201ENST00000390625 CPXCR1Q8N123 301 aa16.49■□□□□ 0.23
IGHV3-49-201ENST00000390625 RAVER2Q9HCJ3 691 aaKnown RBP16.49■□□□□ 0.23
IGHV3-49-201ENST00000390625 PAG1Q9NWQ8 432 aa16.49■□□□□ 0.23
IGHV3-49-201ENST00000390625 NRBP1Q9UHY1 535 aa16.49■□□□□ 0.23
IGHV3-49-201ENST00000390625 DIS3Q9Y2L1 958 aaKnown RBP16.49■□□□□ 0.23
IGHV3-49-201ENST00000390625 YBX2Q9Y2T7 364 aaKnown RBP16.49■□□□□ 0.23
IGHV3-49-201ENST00000390625 ASTN1O14525 1302 aa16.48■□□□□ 0.23
IGHV3-49-201ENST00000390625 ZBED9Q6R2W3 1325 aa16.48■□□□□ 0.23
IGHV3-49-201ENST00000390625 DCDC2CA8MYV0 355 aa16.48■□□□□ 0.23
IGHV3-49-201ENST00000390625 ASGR1P07306 291 aa16.48■□□□□ 0.23
IGHV3-49-201ENST00000390625 RASA1P20936 1047 aa16.48■□□□□ 0.23
IGHV3-49-201ENST00000390625 MFSD5Q6N075 450 aa16.48■□□□□ 0.23
IGHV3-49-201ENST00000390625 ERC1Q8IUD2 1116 aa16.48■□□□□ 0.23
IGHV3-49-201ENST00000390625 VWCEQ96DN2 955 aa16.48■□□□□ 0.23
IGHV3-49-201ENST00000390625 CCDC17Q96LX7 622 aa16.48■□□□□ 0.23
IGHV3-49-201ENST00000390625 TOX2Q96NM4 488 aa16.48■□□□□ 0.23
IGHV3-49-201ENST00000390625 TSEN34Q9BSV6 310 aaKnown RBP16.48■□□□□ 0.23
IGHV3-49-201ENST00000390625 NKX2-4Q9H2Z4 354 aa16.48■□□□□ 0.23
IGHV3-49-201ENST00000390625 CNPY2Q9Y2B0 182 aa16.48■□□□□ 0.23
IGHV3-49-201ENST00000390625 SLC4A4Q9Y6R1 1079 aa16.48■□□□□ 0.23
IGHV3-49-201ENST00000390625 LCTP09848 1927 aa16.48■□□□□ 0.23
IGHV3-49-201ENST00000390625 LRRC37A2A6NM11 1700 aa16.48■□□□□ 0.23
IGHV3-49-201ENST00000390625 SCN5AQ14524 2016 aa16.47■□□□□ 0.23
IGHV3-49-201ENST00000390625 NDUFB10O96000 172 aa16.47■□□□□ 0.23
IGHV3-49-201ENST00000390625 C6orf222P0C671 652 aaPredicted RBP16.47■□□□□ 0.23
IGHV3-49-201ENST00000390625 MYOGP15173 224 aa16.47■□□□□ 0.23
IGHV3-49-201ENST00000390625 CNTN2Q02246 1040 aa16.47■□□□□ 0.23
IGHV3-49-201ENST00000390625 ACVR2BQ13705 512 aa16.47■□□□□ 0.23
IGHV3-49-201ENST00000390625 CCDC144BQ3MJ40 725 aa16.47■□□□□ 0.23
IGHV3-49-201ENST00000390625 CCDC129Q6ZRS4 1044 aa16.47■□□□□ 0.23
IGHV3-49-201ENST00000390625 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.47■□□□□ 0.23
IGHV3-49-201ENST00000390625 KATNBL1Q9H079 304 aa16.47■□□□□ 0.23
IGHV3-49-201ENST00000390625 KANSL2Q9H9L4 492 aa16.47■□□□□ 0.23
IGHV3-49-201ENST00000390625 ATP8A2Q9NTI2 1148 aa16.47■□□□□ 0.23
IGHV3-49-201ENST00000390625 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.47■□□□□ 0.23
IGHV3-49-201ENST00000390625 FAM184BQ9ULE4 1060 aa16.47■□□□□ 0.23
IGHV3-49-201ENST00000390625 RABGGTBP53611 331 aa16.46■□□□□ 0.23
IGHV3-49-201ENST00000390625 TMED8Q6PL24 325 aaPredicted RBP16.46■□□□□ 0.23
IGHV3-49-201ENST00000390625 MAMDC4Q6UXC1 1216 aa16.46■□□□□ 0.23
IGHV3-49-201ENST00000390625 FAM126BQ8IXS8 530 aa16.46■□□□□ 0.23
IGHV3-49-201ENST00000390625 SYMPKQ92797 1274 aaKnown RBP16.46■□□□□ 0.23
IGHV3-49-201ENST00000390625 VTI1AQ96AJ9 217 aa16.46■□□□□ 0.23
IGHV3-49-201ENST00000390625 SLF1Q9BQI6 1058 aa16.46■□□□□ 0.23
IGHV3-49-201ENST00000390625 SH2D4AQ9H788 454 aa16.46■□□□□ 0.23
IGHV3-49-201ENST00000390625 TRANK1O15050 2925 aa16.46■□□□□ 0.23
IGHV3-49-201ENST00000390625 GRIN2DO15399 1336 aa16.45■□□□□ 0.22
IGHV3-49-201ENST00000390625 F5H6K3 240 aa16.45■□□□□ 0.22
IGHV3-49-201ENST00000390625 CCER2I3L3R5 266 aa16.45■□□□□ 0.22
IGHV3-49-201ENST00000390625 SMARCA5O60264 1052 aaPredicted RBP16.45■□□□□ 0.22
IGHV3-49-201ENST00000390625 DUSP11O75319 330 aaKnown RBP16.45■□□□□ 0.22
IGHV3-49-201ENST00000390625 IFIT2P09913 472 aaKnown RBP16.45■□□□□ 0.22
IGHV3-49-201ENST00000390625 KLRC3Q07444 240 aa16.45■□□□□ 0.22
IGHV3-49-201ENST00000390625 RASGRP2Q7LDG7 609 aa16.45■□□□□ 0.22
IGHV3-49-201ENST00000390625 CLASRPQ8N2M8 674 aaKnown RBP16.45■□□□□ 0.22
IGHV3-49-201ENST00000390625 PPP1R13LQ8WUF5 828 aa16.45■□□□□ 0.22
IGHV3-49-201ENST00000390625 DDX11Q96FC9 970 aa16.45■□□□□ 0.22
IGHV3-49-201ENST00000390625 TEX13BQ9BXU2 312 aa16.45■□□□□ 0.22
IGHV3-49-201ENST00000390625 UPF3AQ9H1J1 476 aaKnown RBP16.45■□□□□ 0.22
IGHV3-49-201ENST00000390625 GOPCQ9HD26 462 aa16.45■□□□□ 0.22
IGHV3-49-201ENST00000390625 PRRC2BQ5JSZ5 2229 aaKnown RBP16.45■□□□□ 0.22
IGHV3-49-201ENST00000390625 SYNGAP1Q96PV0 1343 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms