RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 BRMS1Q9HCU9 246 aa19.93■□□□□ 0.78
SQSTM1-202ENST00000389805 CCNL1Q9UK58 526 aaPredicted RBP19.93■□□□□ 0.78
SQSTM1-202ENST00000389805 LAMB2P55268 1798 aa19.93■□□□□ 0.78
SQSTM1-202ENST00000389805 COL5A3P25940 1745 aaPredicted RBP19.92■□□□□ 0.78
SQSTM1-202ENST00000389805 ZMYND10O75800 440 aa19.92■□□□□ 0.78
SQSTM1-202ENST00000389805 USP17L8P0C7I0 530 aa19.92■□□□□ 0.78
SQSTM1-202ENST00000389805 CASP1P29466 404 aa19.92■□□□□ 0.78
SQSTM1-202ENST00000389805 NR1I3Q14994 352 aa19.92■□□□□ 0.78
SQSTM1-202ENST00000389805 SRBD1Q8N5C6 995 aaKnown RBP19.92■□□□□ 0.78
SQSTM1-202ENST00000389805 NCAPGQ9BPX3 1015 aa19.92■□□□□ 0.78
SQSTM1-202ENST00000389805 LIG3P49916 1009 aa19.92■□□□□ 0.78
SQSTM1-202ENST00000389805 POSTNQ15063 836 aa19.92■□□□□ 0.78
SQSTM1-202ENST00000389805 AFAP1L1Q8TED9 768 aa19.92■□□□□ 0.78
SQSTM1-202ENST00000389805 MYCBPQ99417 103 aaPredicted RBP19.92■□□□□ 0.78
SQSTM1-202ENST00000389805 SRPRBQ9Y5M8 271 aaKnown RBP19.92■□□□□ 0.78
SQSTM1-202ENST00000389805 A0A087X0B3 334 aa19.92■□□□□ 0.78
SQSTM1-202ENST00000389805 PHF20Q9BVI0 1012 aa19.92■□□□□ 0.78
SQSTM1-202ENST00000389805 NYXQ9GZU5 481 aa19.92■□□□□ 0.78
SQSTM1-202ENST00000389805 MYH13Q9UKX3 1938 aa19.91■□□□□ 0.78
SQSTM1-202ENST00000389805 PPFIA4O75335 1185 aa19.91■□□□□ 0.78
SQSTM1-202ENST00000389805 CASP14P31944 242 aa19.91■□□□□ 0.78
SQSTM1-202ENST00000389805 ZNF174Q15697 407 aa19.91■□□□□ 0.78
SQSTM1-202ENST00000389805 HOOK1Q9UJC3 728 aaKnown RBP19.91■□□□□ 0.78
SQSTM1-202ENST00000389805 RTCBQ9Y3I0 505 aaKnown RBP19.91■□□□□ 0.78
SQSTM1-202ENST00000389805 PRPF3O43395 683 aaKnown RBP19.91■□□□□ 0.78
SQSTM1-202ENST00000389805 FGRP09769 529 aa19.91■□□□□ 0.78
SQSTM1-202ENST00000389805 RCAN1P53805 252 aa19.91■□□□□ 0.78
SQSTM1-202ENST00000389805 GRIK5Q16478 980 aa19.91■□□□□ 0.78
SQSTM1-202ENST00000389805 DNAJC21Q5F1R6 531 aaKnown RBP19.91■□□□□ 0.78
SQSTM1-202ENST00000389805 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.91■□□□□ 0.78
SQSTM1-202ENST00000389805 MCM9Q9NXL9 1143 aa19.91■□□□□ 0.78
SQSTM1-202ENST00000389805 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.91■□□□□ 0.784e-6■■■□□ 14.9
SQSTM1-202ENST00000389805 SYF2O95926 243 aaKnown RBP19.9■□□□□ 0.78
SQSTM1-202ENST00000389805 TADA2BQ86TJ2 420 aa19.9■□□□□ 0.78
SQSTM1-202ENST00000389805 CRNKL1Q9BZJ0 848 aaKnown RBP19.9■□□□□ 0.78
SQSTM1-202ENST00000389805 GOLGB1Q14789 3259 aaKnown RBP19.9■□□□□ 0.78
SQSTM1-202ENST00000389805 LTBP4Q8N2S1 1624 aa19.9■□□□□ 0.78
SQSTM1-202ENST00000389805 KRT2P35908 639 aa19.9■□□□□ 0.78
SQSTM1-202ENST00000389805 NFIXQ14938 502 aa19.9■□□□□ 0.78
SQSTM1-202ENST00000389805 NPY5RQ15761 445 aa19.9■□□□□ 0.78
SQSTM1-202ENST00000389805 GSPT2Q8IYD1 628 aaKnown RBP19.9■□□□□ 0.78
SQSTM1-202ENST00000389805 NAPGQ99747 312 aaPredicted RBP19.9■□□□□ 0.78
SQSTM1-202ENST00000389805 ANKIB1Q9P2G1 1089 aa19.9■□□□□ 0.78
SQSTM1-202ENST00000389805 TRIM75PA6NK02 468 aa19.89■□□□□ 0.78
SQSTM1-202ENST00000389805 AFMP43652 599 aa19.89■□□□□ 0.78
SQSTM1-202ENST00000389805 VPS72Q15906 364 aa19.89■□□□□ 0.78
SQSTM1-202ENST00000389805 TMTC3Q6ZXV5 915 aa19.89■□□□□ 0.78
SQSTM1-202ENST00000389805 ENOX1Q8TC92 643 aaKnown RBP19.89■□□□□ 0.78
SQSTM1-202ENST00000389805 DYNLL2Q96FJ2 89 aa19.89■□□□□ 0.78
SQSTM1-202ENST00000389805 MTMR7Q9Y216 660 aa19.89■□□□□ 0.78
SQSTM1-202ENST00000389805 DUOX1Q9NRD9 1551 aa19.89■□□□□ 0.78
SQSTM1-202ENST00000389805 ENC1O14682 589 aa19.89■□□□□ 0.77
SQSTM1-202ENST00000389805 MYO1BO43795 1136 aa19.89■□□□□ 0.77
SQSTM1-202ENST00000389805 DIXDC1Q155Q3 683 aa19.89■□□□□ 0.77
SQSTM1-202ENST00000389805 PANX2Q96RD6 677 aa19.89■□□□□ 0.77
SQSTM1-202ENST00000389805 GBP3Q9H0R5 595 aa19.89■□□□□ 0.77
SQSTM1-202ENST00000389805 EHD4Q9H223 541 aa19.89■□□□□ 0.77
SQSTM1-202ENST00000389805 TSPY2A6NKD2 308 aa19.89■□□□□ 0.77
SQSTM1-202ENST00000389805 ACTN4O43707 911 aaKnown RBP19.89■□□□□ 0.77
SQSTM1-202ENST00000389805 XBP1P17861 261 aa19.89■□□□□ 0.77
SQSTM1-202ENST00000389805 CDC25AP30304 524 aa19.89■□□□□ 0.77
SQSTM1-202ENST00000389805 CCT5P48643 541 aa19.89■□□□□ 0.77
SQSTM1-202ENST00000389805 EFCAB13Q8IY85 973 aa19.89■□□□□ 0.77
SQSTM1-202ENST00000389805 ANKRD2Q9GZV1 360 aa19.89■□□□□ 0.77
SQSTM1-202ENST00000389805 ACBD3Q9H3P7 528 aa19.89■□□□□ 0.77
SQSTM1-202ENST00000389805 FXR1P51114 621 aaKnown RBP eCLIP19.88■□□□□ 0.774e-6■□□□□ 9.8
SQSTM1-202ENST00000389805 DZIP1Q86YF9 867 aaKnown RBP19.88■□□□□ 0.77
SQSTM1-202ENST00000389805 STAMQ92783 540 aa19.88■□□□□ 0.77
SQSTM1-202ENST00000389805 MED4Q9NPJ6 270 aa19.88■□□□□ 0.77
SQSTM1-202ENST00000389805 TRIM10Q9UDY6 481 aa19.88■□□□□ 0.77
SQSTM1-202ENST00000389805 A0A1B0GUL6 1792 aa19.88■□□□□ 0.77
SQSTM1-202ENST00000389805 SEMA3EO15041 775 aa19.88■□□□□ 0.77
SQSTM1-202ENST00000389805 SMYD4Q8IYR2 804 aaPredicted RBP19.88■□□□□ 0.77
SQSTM1-202ENST00000389805 KAT2BQ92831 832 aa19.88■□□□□ 0.77
SQSTM1-202ENST00000389805 SECISBP2LQ93073 1101 aaKnown RBP19.88■□□□□ 0.77
SQSTM1-202ENST00000389805 HDAC6Q9UBN7 1215 aa19.88■□□□□ 0.77
SQSTM1-202ENST00000389805 MYH6P13533 1939 aa19.88■□□□□ 0.77
SQSTM1-202ENST00000389805 A0A1B0GTH6 734 aa19.87■□□□□ 0.77
SQSTM1-202ENST00000389805 TOM1O60784 492 aa19.87■□□□□ 0.77
SQSTM1-202ENST00000389805 RC3H1Q5TC82 1133 aaKnown RBP19.87■□□□□ 0.77
SQSTM1-202ENST00000389805 TEX2Q8IWB9 1127 aa19.87■□□□□ 0.77
SQSTM1-202ENST00000389805 CNTNAP5Q8WYK1 1306 aa19.87■□□□□ 0.77
SQSTM1-202ENST00000389805 CCT6AP40227 531 aaKnown RBP19.87■□□□□ 0.77
SQSTM1-202ENST00000389805 PPP2R5BQ15173 497 aa19.87■□□□□ 0.77
SQSTM1-202ENST00000389805 RCSD1Q6JBY9 416 aa19.87■□□□□ 0.77
SQSTM1-202ENST00000389805 MMS22LQ6ZRQ5 1243 aa19.87■□□□□ 0.77
SQSTM1-202ENST00000389805 RASGRP2Q7LDG7 609 aa19.87■□□□□ 0.77
SQSTM1-202ENST00000389805 MLKLQ8NB16 471 aa19.87■□□□□ 0.77
SQSTM1-202ENST00000389805 CTCFLQ8NI51 663 aaPredicted RBP19.87■□□□□ 0.77
SQSTM1-202ENST00000389805 SLF1Q9BQI6 1058 aa19.87■□□□□ 0.77
SQSTM1-202ENST00000389805 CEP131Q9UPN4 1083 aa19.87■□□□□ 0.77
SQSTM1-202ENST00000389805 CASZ1Q86V15 1759 aa19.87■□□□□ 0.77
SQSTM1-202ENST00000389805 SARSP49591 514 aaKnown RBP19.86■□□□□ 0.77
SQSTM1-202ENST00000389805 FBXW10Q5XX13 1052 aa19.86■□□□□ 0.77
SQSTM1-202ENST00000389805 ZNF579Q8NAF0 562 aaKnown RBP19.86■□□□□ 0.77
SQSTM1-202ENST00000389805 SYMPKQ92797 1274 aaKnown RBP19.86■□□□□ 0.77
SQSTM1-202ENST00000389805 CAPZA3Q96KX2 299 aa19.86■□□□□ 0.77
SQSTM1-202ENST00000389805 RBM28Q9NW13 759 aaKnown RBP19.86■□□□□ 0.77
SQSTM1-202ENST00000389805 TFR2Q9UP52 801 aa19.86■□□□□ 0.77
SQSTM1-202ENST00000389805 SRGAP2O75044 1071 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms