RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 TRIM50Q86XT4 487 aa13.56□□□□□ -0.24
KCNQ3-201ENST00000388996 MCF2L2Q86YR7 1114 aa13.56□□□□□ -0.24
KCNQ3-201ENST00000388996 ARHGAP24Q8N264 748 aa13.56□□□□□ -0.24
KCNQ3-201ENST00000388996 SLC12A2P55011 1212 aa13.56□□□□□ -0.24
KCNQ3-201ENST00000388996 GBP6Q6ZN66 633 aa13.56□□□□□ -0.24
KCNQ3-201ENST00000388996 P3H4Q92791 437 aa13.56□□□□□ -0.24
KCNQ3-201ENST00000388996 IQGAP3Q86VI3 1631 aa13.56□□□□□ -0.24
KCNQ3-201ENST00000388996 DDAH1O94760 285 aa13.56□□□□□ -0.24
KCNQ3-201ENST00000388996 GALNT17Q6IS24 598 aa13.56□□□□□ -0.24
KCNQ3-201ENST00000388996 FRMPD2Q68DX3 1309 aaPredicted RBP13.56□□□□□ -0.24
KCNQ3-201ENST00000388996 BLIDQ8IZY5 108 aa13.56□□□□□ -0.24
KCNQ3-201ENST00000388996 MED10Q9BTT4 135 aa13.56□□□□□ -0.24
KCNQ3-201ENST00000388996 YEATS2Q9ULM3 1422 aa13.55□□□□□ -0.24
KCNQ3-201ENST00000388996 KRT12Q99456 494 aa13.55□□□□□ -0.24
KCNQ3-201ENST00000388996 A0A0D9SFI3 127 aa13.55□□□□□ -0.24
KCNQ3-201ENST00000388996 TRMT44Q8IYL2 757 aaKnown RBP13.55□□□□□ -0.24
KCNQ3-201ENST00000388996 RSAD2Q8WXG1 361 aa13.55□□□□□ -0.24
KCNQ3-201ENST00000388996 SPOUT1Q5T280 376 aaKnown RBP13.55□□□□□ -0.24
KCNQ3-201ENST00000388996 EIF4A1P60842 406 aaKnown RBP13.55□□□□□ -0.24
KCNQ3-201ENST00000388996 PPP2R5EQ16537 467 aa13.55□□□□□ -0.24
KCNQ3-201ENST00000388996 MRPL11Q9Y3B7 192 aaKnown RBP13.55□□□□□ -0.24
KCNQ3-201ENST00000388996 ZBTB24O43167 697 aaPredicted RBP13.55□□□□□ -0.24
KCNQ3-201ENST00000388996 FLAD1Q8NFF5 587 aa13.55□□□□□ -0.24
KCNQ3-201ENST00000388996 TM6SF1Q9BZW5 370 aa13.55□□□□□ -0.24
KCNQ3-201ENST00000388996 AS3MTQ9HBK9 375 aa13.55□□□□□ -0.24
KCNQ3-201ENST00000388996 ICA1Q05084 483 aa13.55□□□□□ -0.24
KCNQ3-201ENST00000388996 SND1Q7KZF4 910 aaKnown RBP eCLIP13.55□□□□□ -0.24
KCNQ3-201ENST00000388996 PSMB7Q99436 277 aa13.55□□□□□ -0.24
KCNQ3-201ENST00000388996 GPIHBP1Q8IV16 184 aa13.55□□□□□ -0.24
KCNQ3-201ENST00000388996 OR52Z1P0C646 297 aa13.55□□□□□ -0.24
KCNQ3-201ENST00000388996 PCDHB13Q9Y5F0 798 aa13.55□□□□□ -0.24
KCNQ3-201ENST00000388996 ERBB4Q15303 1308 aa13.55□□□□□ -0.24
KCNQ3-201ENST00000388996 UGGT1Q9NYU2 1555 aa13.55□□□□□ -0.24
KCNQ3-201ENST00000388996 TESPA1A2RU30 521 aaPredicted RBP13.55□□□□□ -0.24
KCNQ3-201ENST00000388996 MAGEF1Q9HAY2 307 aa13.55□□□□□ -0.24
KCNQ3-201ENST00000388996 SDCCAG8Q86SQ7 713 aaPredicted RBP13.54□□□□□ -0.24
KCNQ3-201ENST00000388996 VPS37BQ9H9H4 285 aa13.54□□□□□ -0.24
KCNQ3-201ENST00000388996 SARNPP82979 210 aaKnown RBP13.54□□□□□ -0.24
KCNQ3-201ENST00000388996 BIRC2Q13490 618 aa13.54□□□□□ -0.24
KCNQ3-201ENST00000388996 PPP4R1Q8TF05 950 aa13.54□□□□□ -0.24
KCNQ3-201ENST00000388996 U2AF1L4Q8WU68 220 aaKnown RBP13.54□□□□□ -0.24
KCNQ3-201ENST00000388996 GPKOWQ92917 476 aaPredicted RBP eCLIP13.54□□□□□ -0.24
KCNQ3-201ENST00000388996 KRT26Q7Z3Y9 468 aa13.54□□□□□ -0.24
KCNQ3-201ENST00000388996 POTEDQ86YR6 584 aa13.54□□□□□ -0.24
KCNQ3-201ENST00000388996 MAGEA1P43355 309 aa13.54□□□□□ -0.24
KCNQ3-201ENST00000388996 MIS12Q9H081 205 aa13.54□□□□□ -0.24
KCNQ3-201ENST00000388996 MYOCDQ8IZQ8 938 aa13.54□□□□□ -0.24
KCNQ3-201ENST00000388996 AMFRQ9UKV5 643 aa13.54□□□□□ -0.24
KCNQ3-201ENST00000388996 CD2APQ9Y5K6 639 aa13.54□□□□□ -0.24
KCNQ3-201ENST00000388996 TACC3Q9Y6A5 838 aa13.54□□□□□ -0.24
KCNQ3-201ENST00000388996 MCTP2Q6DN12 878 aa13.54□□□□□ -0.24
KCNQ3-201ENST00000388996 CDK12Q9NYV4 1490 aaPredicted RBP13.54□□□□□ -0.24
KCNQ3-201ENST00000388996 GADD45BO75293 160 aaPredicted RBP13.54□□□□□ -0.24
KCNQ3-201ENST00000388996 PFKFB1P16118 471 aa13.54□□□□□ -0.24
KCNQ3-201ENST00000388996 SCNN1DP51172 638 aa13.54□□□□□ -0.24
KCNQ3-201ENST00000388996 C17orf53Q8N3J3 647 aaPredicted RBP13.54□□□□□ -0.24
KCNQ3-201ENST00000388996 RPGRIP1Q96KN7 1286 aa13.54□□□□□ -0.24
KCNQ3-201ENST00000388996 PAGR1Q9BTK6 254 aa13.54□□□□□ -0.24
KCNQ3-201ENST00000388996 ANKFY1Q9P2R3 1169 aa13.54□□□□□ -0.24
KCNQ3-201ENST00000388996 SEPT14Q6ZU15 432 aa13.53□□□□□ -0.24
KCNQ3-201ENST00000388996 BCAMP50895 628 aa13.53□□□□□ -0.24
KCNQ3-201ENST00000388996 KRT71Q3SY84 523 aa13.53□□□□□ -0.24
KCNQ3-201ENST00000388996 HAUS1Q96CS2 278 aa13.53□□□□□ -0.24
KCNQ3-201ENST00000388996 ZNF277Q9NRM2 450 aaPredicted RBP13.53□□□□□ -0.24
KCNQ3-201ENST00000388996 ALAS1P13196 640 aa13.53□□□□□ -0.24
KCNQ3-201ENST00000388996 ARMCX3Q9UH62 379 aaPredicted RBP13.53□□□□□ -0.24
KCNQ3-201ENST00000388996 RGS12O14924 1447 aa13.53□□□□□ -0.24
KCNQ3-201ENST00000388996 APBA3O96018 575 aa13.53□□□□□ -0.24
KCNQ3-201ENST00000388996 GTF2IP78347 998 aa13.53□□□□□ -0.24
KCNQ3-201ENST00000388996 MAIP1Q8WWC4 291 aa13.53□□□□□ -0.24
KCNQ3-201ENST00000388996 ST7Q9NRC1 585 aa13.53□□□□□ -0.24
KCNQ3-201ENST00000388996 MYH6P13533 1939 aa13.53□□□□□ -0.24
KCNQ3-201ENST00000388996 SCG2P13521 617 aa13.53□□□□□ -0.24
KCNQ3-201ENST00000388996 LRMPQ12912 555 aa13.53□□□□□ -0.24
KCNQ3-201ENST00000388996 ARHGAP44Q17R89 818 aa13.53□□□□□ -0.24
KCNQ3-201ENST00000388996 KRT15P19012 456 aa13.53□□□□□ -0.24
KCNQ3-201ENST00000388996 PHBP35232 272 aa13.53□□□□□ -0.24
KCNQ3-201ENST00000388996 FAM178BQ8IXR5 827 aa13.53□□□□□ -0.24
KCNQ3-201ENST00000388996 RIC8AQ9NPQ8 531 aa13.53□□□□□ -0.24
KCNQ3-201ENST00000388996 AFG3L2Q9Y4W6 797 aa13.53□□□□□ -0.24
KCNQ3-201ENST00000388996 TNNC2P02585 160 aa13.53□□□□□ -0.24
KCNQ3-201ENST00000388996 MYO1AQ9UBC5 1043 aa13.53□□□□□ -0.24
KCNQ3-201ENST00000388996 ME3Q16798 604 aa13.53□□□□□ -0.24
KCNQ3-201ENST00000388996 ZBTB38Q8NAP3 1195 aaPredicted RBP13.53□□□□□ -0.24
KCNQ3-201ENST00000388996 PNMA1Q8ND90 353 aa13.53□□□□□ -0.24
KCNQ3-201ENST00000388996 NR1I2O75469 434 aa13.53□□□□□ -0.24
KCNQ3-201ENST00000388996 GYG1P46976 350 aa13.53□□□□□ -0.24
KCNQ3-201ENST00000388996 LIG4P49917 911 aa13.53□□□□□ -0.24
KCNQ3-201ENST00000388996 RAB20Q9NX57 234 aa13.53□□□□□ -0.24
KCNQ3-201ENST00000388996 KIF11P52732 1056 aa13.52□□□□□ -0.24
KCNQ3-201ENST00000388996 PARP2Q9UGN5 583 aa13.52□□□□□ -0.24
KCNQ3-201ENST00000388996 BUB1BO60566 1050 aaPredicted RBP13.52□□□□□ -0.24
KCNQ3-201ENST00000388996 ZNF445P59923 1031 aa13.52□□□□□ -0.24
KCNQ3-201ENST00000388996 RGS16O15492 202 aaPredicted RBP13.52□□□□□ -0.24
KCNQ3-201ENST00000388996 SORBS3O60504 671 aa13.52□□□□□ -0.24
KCNQ3-201ENST00000388996 PCK1P35558 622 aa13.52□□□□□ -0.24
KCNQ3-201ENST00000388996 PDZD4Q76G19 769 aaPredicted RBP13.52□□□□□ -0.24
KCNQ3-201ENST00000388996 IFNB1P01574 187 aa13.52□□□□□ -0.24
KCNQ3-201ENST00000388996 PPP2R5CQ13362 524 aa13.52□□□□□ -0.24
KCNQ3-201ENST00000388996 KIF22Q14807 665 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms