RNA–Protein interactions for RNA: ENST00000382096.5

VLDLR-201, Transcript of very low density lipoprotein receptor, humanhuman

TSL 5

Gene VLDLR, Length 736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-201ENST00000382096 ARPP21Q9UBL0 812 aaPredicted RBP27.13■■□□□ 1.93
VLDLR-201ENST00000382096 TMEM265A0A087WTH1 108 aa27.12■■□□□ 1.93
VLDLR-201ENST00000382096 SBK1Q52WX2 424 aa27.12■■□□□ 1.93
VLDLR-201ENST00000382096 GIMAP6Q6P9H5 292 aa27.12■■□□□ 1.93
VLDLR-201ENST00000382096 MSL3Q8N5Y2 521 aaKnown RBP27.12■■□□□ 1.93
VLDLR-201ENST00000382096 MYLIPQ8WY64 445 aa27.12■■□□□ 1.93
VLDLR-201ENST00000382096 TSEN34Q9BSV6 310 aaKnown RBP27.12■■□□□ 1.93
VLDLR-201ENST00000382096 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.12■■□□□ 1.93
VLDLR-201ENST00000382096 CNPY2Q9Y2B0 182 aa27.12■■□□□ 1.93
VLDLR-201ENST00000382096 PCDHB15Q9Y5E8 787 aa27.12■■□□□ 1.93
VLDLR-201ENST00000382096 EPHB4P54760 987 aa27.11■■□□□ 1.93
VLDLR-201ENST00000382096 TSHZ3Q63HK5 1081 aa27.11■■□□□ 1.93
VLDLR-201ENST00000382096 ANKRD33Q7Z3H0 272 aa27.11■■□□□ 1.93
VLDLR-201ENST00000382096 APPBP2Q92624 585 aa27.11■■□□□ 1.93
VLDLR-201ENST00000382096 OSBP2Q969R2 916 aa27.11■■□□□ 1.93
VLDLR-201ENST00000382096 LENG1Q96BZ8 264 aaPredicted RBP27.11■■□□□ 1.93
VLDLR-201ENST00000382096 RNPC3Q96LT9 517 aaKnown RBP27.11■■□□□ 1.93
VLDLR-201ENST00000382096 GSG1L2A8MUP6 293 aa27.1■■□□□ 1.93
VLDLR-201ENST00000382096 RNF113AO15541 343 aaKnown RBP27.1■■□□□ 1.93
VLDLR-201ENST00000382096 PQBP1O60828 265 aaKnown RBP27.1■■□□□ 1.93
VLDLR-201ENST00000382096 ZFYP08048 801 aaPredicted RBP27.1■■□□□ 1.93
VLDLR-201ENST00000382096 RAG1P15918 1043 aa27.1■■□□□ 1.93
VLDLR-201ENST00000382096 TOX2Q96NM4 488 aa27.1■■□□□ 1.93
VLDLR-201ENST00000382096 TEX13BQ9BXU2 312 aa27.1■■□□□ 1.93
VLDLR-201ENST00000382096 TTC41PQ6P2S7 1318 aa27.1■■□□□ 1.93
VLDLR-201ENST00000382096 SYNGAP1Q96PV0 1343 aa27.1■■□□□ 1.93
VLDLR-201ENST00000382096 SYNRGQ9UMZ2 1314 aa27.1■■□□□ 1.93
VLDLR-201ENST00000382096 RAD21O60216 631 aa27.09■■□□□ 1.93
VLDLR-201ENST00000382096 SLF1Q9BQI6 1058 aa27.09■■□□□ 1.93
VLDLR-201ENST00000382096 ACLYP53396 1101 aa27.08■■□□□ 1.93
VLDLR-201ENST00000382096 FPGSQ05932 587 aa27.08■■□□□ 1.93
VLDLR-201ENST00000382096 MAMDC4Q6UXC1 1216 aa27.08■■□□□ 1.93
VLDLR-201ENST00000382096 TMEM39AQ9NV64 488 aa27.08■■□□□ 1.93
VLDLR-201ENST00000382096 TTC28Q96AY4 2481 aa27.07■■□□□ 1.92
VLDLR-201ENST00000382096 DNAJC25-GNG10A0A024R161 153 aa27.07■■□□□ 1.92
VLDLR-201ENST00000382096 MOXD2PA6NHM9 499 aa27.07■■□□□ 1.92
VLDLR-201ENST00000382096 FOSL2P15408 326 aa27.07■■□□□ 1.92
VLDLR-201ENST00000382096 RASA1P20936 1047 aa27.07■■□□□ 1.92
VLDLR-201ENST00000382096 FAAP100Q0VG06 881 aa27.07■■□□□ 1.92
VLDLR-201ENST00000382096 SNRNP48Q6IEG0 339 aaKnown RBP27.07■■□□□ 1.92
VLDLR-201ENST00000382096 KLHDC9Q8NEP7 349 aa27.07■■□□□ 1.92
VLDLR-201ENST00000382096 NUP133Q8WUM0 1156 aa27.07■■□□□ 1.92
VLDLR-201ENST00000382096 NUP88Q99567 741 aaPredicted RBP27.07■■□□□ 1.92
VLDLR-201ENST00000382096 STARD7Q9NQZ5 370 aa27.07■■□□□ 1.92
VLDLR-201ENST00000382096 NYAP2Q9P242 653 aa27.07■■□□□ 1.92
VLDLR-201ENST00000382096 ATP2A1O14983 1001 aa27.06■■□□□ 1.92
VLDLR-201ENST00000382096 SNAI1O95863 264 aaPredicted RBP27.06■■□□□ 1.92
VLDLR-201ENST00000382096 RRP1P56182 461 aaKnown RBP27.06■■□□□ 1.92
VLDLR-201ENST00000382096 CCSAPQ6IQ19 270 aaPredicted RBP27.06■■□□□ 1.92
VLDLR-201ENST00000382096 PI4K2BQ8TCG2 481 aa27.06■■□□□ 1.92
VLDLR-201ENST00000382096 FAM184BQ9ULE4 1060 aa27.06■■□□□ 1.92
VLDLR-201ENST00000382096 RIPK3Q9Y572 518 aa27.06■■□□□ 1.92
VLDLR-201ENST00000382096 DCDC2CA8MYV0 355 aa27.05■■□□□ 1.92
VLDLR-201ENST00000382096 GPAA1O43292 621 aa27.05■■□□□ 1.92
VLDLR-201ENST00000382096 GNAT2P19087 354 aa27.05■■□□□ 1.92
VLDLR-201ENST00000382096 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.05■■□□□ 1.92
VLDLR-201ENST00000382096 ZNF467Q7Z7K2 595 aaPredicted RBP27.05■■□□□ 1.92
VLDLR-201ENST00000382096 PRPF38AQ8NAV1 312 aaKnown RBP27.05■■□□□ 1.92
VLDLR-201ENST00000382096 DDX11Q96FC9 970 aa27.05■■□□□ 1.92
VLDLR-201ENST00000382096 CHD9Q3L8U1 2897 aa27.05■■□□□ 1.92
VLDLR-201ENST00000382096 F5H6K3 240 aa27.04■■□□□ 1.92
VLDLR-201ENST00000382096 ERC2O15083 957 aa27.04■■□□□ 1.92
VLDLR-201ENST00000382096 DUSP11O75319 330 aaKnown RBP27.04■■□□□ 1.92
VLDLR-201ENST00000382096 NDUFB10O96000 172 aa27.04■■□□□ 1.92
VLDLR-201ENST00000382096 CST5P28325 142 aaPredicted RBP27.04■■□□□ 1.92
VLDLR-201ENST00000382096 KLRC3Q07444 240 aa27.04■■□□□ 1.92
VLDLR-201ENST00000382096 LRRFIP1Q32MZ4 808 aaKnown RBP27.04■■□□□ 1.92
VLDLR-201ENST00000382096 EPB41L4AQ9HCS5 686 aaPredicted RBP27.04■■□□□ 1.92
VLDLR-201ENST00000382096 M0R2C6 588 aa27.03■■□□□ 1.92
VLDLR-201ENST00000382096 KCNA10Q16322 511 aa27.03■■□□□ 1.92
VLDLR-201ENST00000382096 TBX21Q9UL17 535 aa27.03■■□□□ 1.92
VLDLR-201ENST00000382096 MUC3AQ02505 3323 aa27.03■■□□□ 1.92
VLDLR-201ENST00000382096 ELP1O95163 1332 aa27.02■■□□□ 1.92
VLDLR-201ENST00000382096 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.02■■□□□ 1.92
VLDLR-201ENST00000382096 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.02■■□□□ 1.92
VLDLR-201ENST00000382096 TIMP1P01033 207 aa27.02■■□□□ 1.92
VLDLR-201ENST00000382096 DNAJB2P25686 324 aa27.02■■□□□ 1.92
VLDLR-201ENST00000382096 OTUD7AQ8TE49 926 aaPredicted RBP27.02■■□□□ 1.92
VLDLR-201ENST00000382096 MKNK2Q9HBH9 465 aa27.02■■□□□ 1.92
VLDLR-201ENST00000382096 ZHX1Q9UKY1 873 aaPredicted RBP27.02■■□□□ 1.92
VLDLR-201ENST00000382096 MROH7Q68CQ1 1323 aa27.01■■□□□ 1.91
VLDLR-201ENST00000382096 IGKV6D-41A0A0C4DH26 115 aa27.01■■□□□ 1.91
VLDLR-201ENST00000382096 MYADML2A6NDP7 307 aa27.01■■□□□ 1.91
VLDLR-201ENST00000382096 SALL3Q9BXA9 1300 aa27■■□□□ 1.91
VLDLR-201ENST00000382096 MINDY4BA8MYZ0 360 aa27■■□□□ 1.91
VLDLR-201ENST00000382096 PATL2C9JE40 543 aaKnown RBP27■■□□□ 1.91
VLDLR-201ENST00000382096 ACVR2BQ13705 512 aa27■■□□□ 1.91
VLDLR-201ENST00000382096 GLT1D1Q96MS3 346 aa27■■□□□ 1.91
VLDLR-201ENST00000382096 UPF3AQ9H1J1 476 aaKnown RBP27■■□□□ 1.91
VLDLR-201ENST00000382096 SLC38A10Q9HBR0 1119 aa27■■□□□ 1.91
VLDLR-201ENST00000382096 CDKN2AIPQ9NXV6 580 aaPredicted RBP27■■□□□ 1.91
VLDLR-201ENST00000382096 SYNPO2Q9UMS6 1093 aa27■■□□□ 1.91
VLDLR-201ENST00000382096 LRRC37A2A6NM11 1700 aa26.99■■□□□ 1.91
VLDLR-201ENST00000382096 ADCY6O43306 1168 aa26.99■■□□□ 1.91
VLDLR-201ENST00000382096 ZBED4O75132 1171 aa26.99■■□□□ 1.91
VLDLR-201ENST00000382096 CDK7P50613 346 aa26.99■■□□□ 1.91
VLDLR-201ENST00000382096 GRIN2CQ14957 1233 aa26.99■■□□□ 1.91
VLDLR-201ENST00000382096 MFSD5Q6N075 450 aa26.99■■□□□ 1.91
VLDLR-201ENST00000382096 CPXCR1Q8N123 301 aa26.99■■□□□ 1.91
VLDLR-201ENST00000382096 PCSK9Q8NBP7 692 aaKnown RBP26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms