RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 SLC12A7Q9Y666 1083 aa16.74■□□□□ 0.27
CTNS-202ENST00000381870 LMTK3Q96Q04 1460 aa16.74■□□□□ 0.27
CTNS-202ENST00000381870 ZNF233A6NK53 670 aa16.74■□□□□ 0.27
CTNS-202ENST00000381870 PPP1R12AO14974 1030 aaPredicted RBP16.74■□□□□ 0.27
CTNS-202ENST00000381870 PPP1R37O75864 691 aa16.74■□□□□ 0.27
CTNS-202ENST00000381870 TSR1Q2NL82 804 aaKnown RBP16.74■□□□□ 0.27
CTNS-202ENST00000381870 HAUS3Q68CZ6 603 aa16.74■□□□□ 0.27
CTNS-202ENST00000381870 KIRREL3Q8IZU9 778 aa16.74■□□□□ 0.27
CTNS-202ENST00000381870 MB21D1Q8N884 522 aa16.74■□□□□ 0.27
CTNS-202ENST00000381870 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.74■□□□□ 0.27
CTNS-202ENST00000381870 XDHP47989 1333 aa16.74■□□□□ 0.27
CTNS-202ENST00000381870 IFNAR1P17181 557 aa16.73■□□□□ 0.27
CTNS-202ENST00000381870 CXCR5P32302 372 aa16.73■□□□□ 0.27
CTNS-202ENST00000381870 SPRED3Q2MJR0 410 aa16.73■□□□□ 0.27
CTNS-202ENST00000381870 ZNF662Q6ZS27 426 aa16.73■□□□□ 0.27
CTNS-202ENST00000381870 TEX11Q8IYF3 940 aa16.73■□□□□ 0.27
CTNS-202ENST00000381870 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.73■□□□□ 0.27
CTNS-202ENST00000381870 WASF1Q92558 559 aa16.73■□□□□ 0.27
CTNS-202ENST00000381870 CAVIN3Q969G5 261 aa16.73■□□□□ 0.27
CTNS-202ENST00000381870 TMEM87BQ96K49 555 aa16.73■□□□□ 0.27
CTNS-202ENST00000381870 CCDC43Q96MW1 224 aaKnown RBP16.73■□□□□ 0.27
CTNS-202ENST00000381870 AGPAT5Q9NUQ2 364 aa16.73■□□□□ 0.27
CTNS-202ENST00000381870 STIM2Q9P246 746 aa16.73■□□□□ 0.27
CTNS-202ENST00000381870 CDR1P51861 262 aa16.73■□□□□ 0.27
CTNS-202ENST00000381870 PLCB4Q15147 1175 aa16.73■□□□□ 0.27
CTNS-202ENST00000381870 SGMS1Q86VZ5 419 aa16.73■□□□□ 0.27
CTNS-202ENST00000381870 IRF2BP1Q8IU81 584 aa16.73■□□□□ 0.27
CTNS-202ENST00000381870 ZNF496Q96IT1 587 aaPredicted RBP16.73■□□□□ 0.27
CTNS-202ENST00000381870 PURBQ96QR8 312 aaKnown RBP16.73■□□□□ 0.27
CTNS-202ENST00000381870 NHEJ1Q9H9Q4 299 aaPredicted RBP16.73■□□□□ 0.27
CTNS-202ENST00000381870 CAPN11Q9UMQ6 739 aa16.73■□□□□ 0.27
CTNS-202ENST00000381870 WNT7AO00755 349 aa16.72■□□□□ 0.27
CTNS-202ENST00000381870 PARP1P09874 1014 aaKnown RBP16.72■□□□□ 0.27
CTNS-202ENST00000381870 NR1D1P20393 614 aa16.72■□□□□ 0.27
CTNS-202ENST00000381870 MRPL12P52815 198 aaKnown RBP16.72■□□□□ 0.27
CTNS-202ENST00000381870 SNCBQ16143 134 aa16.72■□□□□ 0.27
CTNS-202ENST00000381870 EARS2Q5JPH6 523 aaKnown RBP16.72■□□□□ 0.27
CTNS-202ENST00000381870 PARP9Q8IXQ6 854 aa16.72■□□□□ 0.27
CTNS-202ENST00000381870 CCDC114Q96M63 670 aa16.72■□□□□ 0.27
CTNS-202ENST00000381870 CAPN6Q9Y6Q1 641 aa16.72■□□□□ 0.27
CTNS-202ENST00000381870 SPEF2Q9C093 1822 aa16.72■□□□□ 0.27
CTNS-202ENST00000381870 TRIM49BA6NDI0 452 aa16.72■□□□□ 0.27
CTNS-202ENST00000381870 E7EVH7 732 aa16.72■□□□□ 0.27
CTNS-202ENST00000381870 FAM153BP0C7A2 387 aa16.72■□□□□ 0.27
CTNS-202ENST00000381870 E2F5Q15329 346 aa16.72■□□□□ 0.27
CTNS-202ENST00000381870 FAM153CQ494X1 144 aa16.72■□□□□ 0.27
CTNS-202ENST00000381870 NFRKBQ6P4R8 1299 aa16.72■□□□□ 0.27
CTNS-202ENST00000381870 CYB5D1Q6P9G0 228 aa16.72■□□□□ 0.27
CTNS-202ENST00000381870 C6orf89Q6UWU4 347 aa16.72■□□□□ 0.27
CTNS-202ENST00000381870 FNBP4Q8N3X1 1017 aaPredicted RBP16.72■□□□□ 0.27
CTNS-202ENST00000381870 SCLT1Q96NL6 688 aa16.72■□□□□ 0.27
CTNS-202ENST00000381870 FAM153AQ9UHL3 310 aa16.72■□□□□ 0.27
CTNS-202ENST00000381870 GDAQ9Y2T3 454 aa16.72■□□□□ 0.27
CTNS-202ENST00000381870 IFIT3O14879 490 aaKnown RBP16.71■□□□□ 0.27
CTNS-202ENST00000381870 CYLC1P35663 651 aaPredicted RBP16.71■□□□□ 0.27
CTNS-202ENST00000381870 MEA1Q16626 185 aa16.71■□□□□ 0.27
CTNS-202ENST00000381870 NAIF1Q69YI7 327 aaPredicted RBP16.71■□□□□ 0.27
CTNS-202ENST00000381870 LRWD1Q9UFC0 647 aa16.71■□□□□ 0.27
CTNS-202ENST00000381870 TRIM75PA6NK02 468 aa16.71■□□□□ 0.26
CTNS-202ENST00000381870 H7C1W4 665 aa16.71■□□□□ 0.26
CTNS-202ENST00000381870 MDH1P40925 334 aaKnown RBP16.71■□□□□ 0.26
CTNS-202ENST00000381870 KLK7P49862 253 aa16.71■□□□□ 0.26
CTNS-202ENST00000381870 CFAP58Q5T655 872 aa16.71■□□□□ 0.26
CTNS-202ENST00000381870 TRIM22Q8IYM9 498 aa16.71■□□□□ 0.26
CTNS-202ENST00000381870 FUKQ8N0W3 1084 aa16.71■□□□□ 0.26
CTNS-202ENST00000381870 IQCKQ8N0W5 287 aa16.71■□□□□ 0.26
CTNS-202ENST00000381870 MTRQ99707 1265 aa16.71■□□□□ 0.26
CTNS-202ENST00000381870 MLXIPQ9HAP2 919 aa16.71■□□□□ 0.26
CTNS-202ENST00000381870 HAUS2Q9NVX0 235 aa16.71■□□□□ 0.26
CTNS-202ENST00000381870 TBC1D2BQ9UPU7 963 aa16.71■□□□□ 0.26
CTNS-202ENST00000381870 ZNF142P52746 1687 aaPredicted RBP16.7■□□□□ 0.26
CTNS-202ENST00000381870 TMCO5BA8MYB1 307 aa16.7■□□□□ 0.26
CTNS-202ENST00000381870 ZNF263O14978 683 aa16.7■□□□□ 0.26
CTNS-202ENST00000381870 FAM107AO95990 144 aa16.7■□□□□ 0.26
CTNS-202ENST00000381870 CLNS1AP54105 237 aaKnown RBP16.7■□□□□ 0.26
CTNS-202ENST00000381870 KIF5AQ12840 1032 aa16.7■□□□□ 0.26
CTNS-202ENST00000381870 CRYMQ14894 314 aa16.7■□□□□ 0.26
CTNS-202ENST00000381870 ZNF572Q7Z3I7 529 aaPredicted RBP16.7■□□□□ 0.26
CTNS-202ENST00000381870 KRT26Q7Z3Y9 468 aa16.7■□□□□ 0.26
CTNS-202ENST00000381870 ZNF507Q8TCN5 953 aa16.7■□□□□ 0.26
CTNS-202ENST00000381870 TBC1D22AQ8WUA7 517 aa16.7■□□□□ 0.26
CTNS-202ENST00000381870 PIK3R5Q8WYR1 880 aa16.7■□□□□ 0.26
CTNS-202ENST00000381870 RUBCNQ92622 972 aa16.7■□□□□ 0.26
CTNS-202ENST00000381870 SHISA4Q96DD7 197 aa16.7■□□□□ 0.26
CTNS-202ENST00000381870 PPANQ9NQ55 473 aaKnown RBP16.7■□□□□ 0.26
CTNS-202ENST00000381870 ZSWIM5Q9P217 1185 aa16.7■□□□□ 0.26
CTNS-202ENST00000381870 CEP126Q9P2H0 1117 aa16.7■□□□□ 0.26
CTNS-202ENST00000381870 TPX2Q9ULW0 747 aaKnown RBP16.7■□□□□ 0.26
CTNS-202ENST00000381870 SIPA1L3O60292 1781 aaPredicted RBP16.7■□□□□ 0.26
CTNS-202ENST00000381870 ESYT3A0FGR9 886 aa16.7■□□□□ 0.26
CTNS-202ENST00000381870 LGALS16A8MUM7 142 aa16.7■□□□□ 0.26
CTNS-202ENST00000381870 DNM1LO00429 736 aa16.7■□□□□ 0.26
CTNS-202ENST00000381870 IPO7O95373 1038 aaKnown RBP16.7■□□□□ 0.26
CTNS-202ENST00000381870 CARSP49589 748 aaKnown RBP16.7■□□□□ 0.26
CTNS-202ENST00000381870 OSBPL9Q96SU4 736 aa16.7■□□□□ 0.26
CTNS-202ENST00000381870 NFU1Q9UMS0 254 aa16.7■□□□□ 0.26
CTNS-202ENST00000381870 ZSCAN5CA6NGD5 496 aaPredicted RBP16.69■□□□□ 0.26
CTNS-202ENST00000381870 MOCS3O95396 460 aa16.69■□□□□ 0.26
CTNS-202ENST00000381870 PRCPP42785 496 aa16.69■□□□□ 0.26
CTNS-202ENST00000381870 CCDC96Q2M329 555 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms