RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 GGA2Q9UJY4 613 aa21.12■□□□□ 0.97
SMARCD1-201ENST00000381513 ALKQ9UM73 1620 aa21.12■□□□□ 0.97
SMARCD1-201ENST00000381513 ANTXR2P58335 489 aa21.12■□□□□ 0.97
SMARCD1-201ENST00000381513 EPSTI1Q96J88 318 aa21.12■□□□□ 0.97
SMARCD1-201ENST00000381513 MYH8P13535 1937 aa21.12■□□□□ 0.97
SMARCD1-201ENST00000381513 CEMIPQ8WUJ3 1361 aa21.12■□□□□ 0.97
SMARCD1-201ENST00000381513 SEMA3EO15041 775 aa21.12■□□□□ 0.97
SMARCD1-201ENST00000381513 MYBL1P10243 752 aa21.12■□□□□ 0.97
SMARCD1-201ENST00000381513 PECAM1P16284 738 aaPredicted RBP21.12■□□□□ 0.97
SMARCD1-201ENST00000381513 TRIM21P19474 475 aaKnown RBP21.12■□□□□ 0.97
SMARCD1-201ENST00000381513 DPYDQ12882 1025 aa21.12■□□□□ 0.97
SMARCD1-201ENST00000381513 TRAF1Q13077 416 aa21.12■□□□□ 0.97
SMARCD1-201ENST00000381513 SPA17Q15506 151 aa21.12■□□□□ 0.97
SMARCD1-201ENST00000381513 GKAP1Q5VSY0 366 aaPredicted RBP21.12■□□□□ 0.97
SMARCD1-201ENST00000381513 TTLL7Q6ZT98 887 aa21.12■□□□□ 0.97
SMARCD1-201ENST00000381513 TBC1D1Q86TI0 1168 aaPredicted RBP21.12■□□□□ 0.97
SMARCD1-201ENST00000381513 IQCKQ8N0W5 287 aa21.12■□□□□ 0.97
SMARCD1-201ENST00000381513 CAVIN3Q969G5 261 aa21.12■□□□□ 0.97
SMARCD1-201ENST00000381513 ANKRD33BA6NCL7 494 aa21.11■□□□□ 0.97
SMARCD1-201ENST00000381513 HMGB1P1B2RPK0 211 aaPredicted RBP21.11■□□□□ 0.97
SMARCD1-201ENST00000381513 ZNF213O14771 459 aa21.11■□□□□ 0.97
SMARCD1-201ENST00000381513 RNF113AO15541 343 aaKnown RBP21.11■□□□□ 0.97
SMARCD1-201ENST00000381513 HLTFQ14527 1009 aaKnown RBP eCLIP21.11■□□□□ 0.97
SMARCD1-201ENST00000381513 ELOA2Q8IYF1 753 aaPredicted RBP21.11■□□□□ 0.97
SMARCD1-201ENST00000381513 CCDC63Q8NA47 563 aa21.11■□□□□ 0.97
SMARCD1-201ENST00000381513 FAM167BQ9BTA0 163 aa21.11■□□□□ 0.97
SMARCD1-201ENST00000381513 PIK3C2BO00750 1634 aa21.11■□□□□ 0.97
SMARCD1-201ENST00000381513 PPP1R3GB7ZBB8 358 aa21.11■□□□□ 0.97
SMARCD1-201ENST00000381513 MGRN1O60291 552 aa21.11■□□□□ 0.97
SMARCD1-201ENST00000381513 HEXIM1O94992 359 aaKnown RBP21.11■□□□□ 0.97
SMARCD1-201ENST00000381513 FGAP02671 866 aa21.11■□□□□ 0.97
SMARCD1-201ENST00000381513 PAK2Q13177 524 aa21.11■□□□□ 0.97
SMARCD1-201ENST00000381513 XRCC4Q13426 336 aa21.11■□□□□ 0.97
SMARCD1-201ENST00000381513 PLCD4Q9BRC7 762 aa21.11■□□□□ 0.97
SMARCD1-201ENST00000381513 VPS54Q9P1Q0 977 aa21.11■□□□□ 0.97
SMARCD1-201ENST00000381513 LRWD1Q9UFC0 647 aa21.11■□□□□ 0.97
SMARCD1-201ENST00000381513 PLAAQ9Y263 795 aa21.11■□□□□ 0.97
SMARCD1-201ENST00000381513 C15orf41Q9Y2V0 281 aa21.11■□□□□ 0.97
SMARCD1-201ENST00000381513 DIAPH2O60879 1101 aa21.1■□□□□ 0.97
SMARCD1-201ENST00000381513 UPP2O95045 317 aa21.1■□□□□ 0.97
SMARCD1-201ENST00000381513 CDCA2Q69YH5 1023 aaPredicted RBP21.1■□□□□ 0.97
SMARCD1-201ENST00000381513 CEP170BQ9Y4F5 1589 aaPredicted RBP21.1■□□□□ 0.97
SMARCD1-201ENST00000381513 PHF20L1A8MW92 1017 aa21.1■□□□□ 0.97
SMARCD1-201ENST00000381513 ITGB3BPQ13352 177 aaPredicted RBP21.1■□□□□ 0.97
SMARCD1-201ENST00000381513 GNPTABQ3T906 1256 aa21.1■□□□□ 0.97
SMARCD1-201ENST00000381513 TCP11X2Q5H9J9 407 aa21.1■□□□□ 0.97
SMARCD1-201ENST00000381513 MB21D2Q8IYB1 491 aaPredicted RBP21.1■□□□□ 0.97
SMARCD1-201ENST00000381513 OSBP2Q969R2 916 aa21.1■□□□□ 0.97
SMARCD1-201ENST00000381513 ITFG2Q969R8 447 aa21.1■□□□□ 0.97
SMARCD1-201ENST00000381513 MLXIPQ9HAP2 919 aa21.1■□□□□ 0.97
SMARCD1-201ENST00000381513 RBM12Q9NTZ6 932 aaKnown RBP21.1■□□□□ 0.97
SMARCD1-201ENST00000381513 ARAP3Q8WWN8 1544 aa21.1■□□□□ 0.97
SMARCD1-201ENST00000381513 GOLGA8AA7E2F4 631 aa21.1■□□□□ 0.97
SMARCD1-201ENST00000381513 HOXB7P09629 217 aa21.1■□□□□ 0.97
SMARCD1-201ENST00000381513 IFIT1P09914 478 aaKnown RBP21.1■□□□□ 0.97
SMARCD1-201ENST00000381513 PPP4R3AQ6IN85 833 aa21.1■□□□□ 0.97
SMARCD1-201ENST00000381513 MPRIPQ6WCQ1 1025 aa21.1■□□□□ 0.97
SMARCD1-201ENST00000381513 KRT26Q7Z3Y9 468 aa21.1■□□□□ 0.97
SMARCD1-201ENST00000381513 PAGE5Q96GU1 130 aa21.1■□□□□ 0.97
SMARCD1-201ENST00000381513 OSBPL9Q96SU4 736 aa21.1■□□□□ 0.97
SMARCD1-201ENST00000381513 LIMA1Q9UHB6 759 aaKnown RBP21.1■□□□□ 0.97
SMARCD1-201ENST00000381513 DENND2AQ9ULE3 1009 aa21.1■□□□□ 0.97
SMARCD1-201ENST00000381513 GCOM1H8Y6P7 765 aaPredicted RBP21.09■□□□□ 0.97
SMARCD1-201ENST00000381513 NCK2O43639 380 aa21.09■□□□□ 0.97
SMARCD1-201ENST00000381513 MOCS3O95396 460 aa21.09■□□□□ 0.97
SMARCD1-201ENST00000381513 MYZAPP0CAP1 466 aa21.09■□□□□ 0.97
SMARCD1-201ENST00000381513 MYL6BP14649 208 aa21.09■□□□□ 0.97
SMARCD1-201ENST00000381513 PIP4K2AP48426 406 aaPredicted RBP21.09■□□□□ 0.97
SMARCD1-201ENST00000381513 RPS6KA3P51812 740 aa21.09■□□□□ 0.97
SMARCD1-201ENST00000381513 RNASE9P60153 205 aaKnown RBP21.09■□□□□ 0.97
SMARCD1-201ENST00000381513 GLE1Q53GS7 698 aaKnown RBP21.09■□□□□ 0.97
SMARCD1-201ENST00000381513 NBPF5PQ86XG9 351 aaPredicted RBP21.09■□□□□ 0.97
SMARCD1-201ENST00000381513 MYD88Q99836 296 aa21.09■□□□□ 0.97
SMARCD1-201ENST00000381513 NHEJ1Q9H9Q4 299 aaPredicted RBP21.09■□□□□ 0.97
SMARCD1-201ENST00000381513 KIDINS220Q9ULH0 1771 aa21.09■□□□□ 0.97
SMARCD1-201ENST00000381513 USO1O60763 962 aaKnown RBP21.09■□□□□ 0.97
SMARCD1-201ENST00000381513 GLI1P08151 1106 aa21.09■□□□□ 0.97
SMARCD1-201ENST00000381513 TOB1P50616 345 aaPredicted RBP21.09■□□□□ 0.97
SMARCD1-201ENST00000381513 TRIM58Q8NG06 486 aa21.09■□□□□ 0.97
SMARCD1-201ENST00000381513 OR2W6PQ8NHA6 318 aa21.09■□□□□ 0.97
SMARCD1-201ENST00000381513 EEF2KMTQ96G04 330 aa21.09■□□□□ 0.97
SMARCD1-201ENST00000381513 CAPN6Q9Y6Q1 641 aa21.09■□□□□ 0.97
SMARCD1-201ENST00000381513 NRKQ7Z2Y5 1582 aa21.08■□□□□ 0.97
SMARCD1-201ENST00000381513 PTPN12Q05209 780 aaKnown RBP21.08■□□□□ 0.97
SMARCD1-201ENST00000381513 NR5A1Q13285 461 aa21.08■□□□□ 0.97
SMARCD1-201ENST00000381513 WDR59Q6PJI9 974 aa21.08■□□□□ 0.97
SMARCD1-201ENST00000381513 ANGEL1Q9UNK9 670 aaKnown RBP21.08■□□□□ 0.97
SMARCD1-201ENST00000381513 PAK1Q13153 545 aa21.08■□□□□ 0.97
SMARCD1-201ENST00000381513 NELFBQ8WX92 580 aa21.08■□□□□ 0.97
SMARCD1-201ENST00000381513 CCDC42Q96M95 316 aa21.08■□□□□ 0.97
SMARCD1-201ENST00000381513 ZBTB43O43298 467 aa21.08■□□□□ 0.96
SMARCD1-201ENST00000381513 MIS18BP1Q6P0N0 1132 aa21.08■□□□□ 0.96
SMARCD1-201ENST00000381513 ANKRD13CQ8N6S4 541 aa21.08■□□□□ 0.96
SMARCD1-201ENST00000381513 SSRP1Q08945 709 aaKnown RBP21.07■□□□□ 0.96
SMARCD1-201ENST00000381513 C3orf20Q8ND61 904 aa21.07■□□□□ 0.96
SMARCD1-201ENST00000381513 MS4A14Q96JA4 679 aa21.07■□□□□ 0.96
SMARCD1-201ENST00000381513 COPRSQ9NQ92 184 aa21.07■□□□□ 0.96
SMARCD1-201ENST00000381513 AGPAT5Q9NUQ2 364 aa21.07■□□□□ 0.96
SMARCD1-201ENST00000381513 HYOU1Q9Y4L1 999 aa21.07■□□□□ 0.96
SMARCD1-201ENST00000381513 RFX7Q2KHR2 1363 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms