RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 CNMDO75829 334 aa18.94■□□□□ 0.62
SNRPB-201ENST00000381342 EN2P19622 333 aaPredicted RBP18.94■□□□□ 0.62
SNRPB-201ENST00000381342 MAPK4P31152 587 aa18.94■□□□□ 0.62
SNRPB-201ENST00000381342 DSG3P32926 999 aa18.94■□□□□ 0.62
SNRPB-201ENST00000381342 IKQ13123 557 aaPredicted RBP18.94■□□□□ 0.62
SNRPB-201ENST00000381342 LBX2Q6XYB7 198 aa18.94■□□□□ 0.62
SNRPB-201ENST00000381342 SLF1Q9BQI6 1058 aa18.94■□□□□ 0.62
SNRPB-201ENST00000381342 LY9Q9HBG7 655 aa18.94■□□□□ 0.62
SNRPB-201ENST00000381342 HOXC10Q9NYD6 342 aa18.94■□□□□ 0.62
SNRPB-201ENST00000381342 BTBD7Q9P203 1132 aa18.94■□□□□ 0.62
SNRPB-201ENST00000381342 RBPJLQ9UBG7 517 aa18.94■□□□□ 0.62
SNRPB-201ENST00000381342 PPP1R9AQ9ULJ8 1098 aa18.94■□□□□ 0.62
SNRPB-201ENST00000381342 RABGAP1Q9Y3P9 1069 aa18.94■□□□□ 0.62
SNRPB-201ENST00000381342 PLXNB2O15031 1838 aa18.93■□□□□ 0.62
SNRPB-201ENST00000381342 TMEM232C9JQI7 657 aa18.93■□□□□ 0.62
SNRPB-201ENST00000381342 SH2B2O14492 632 aaPredicted RBP18.93■□□□□ 0.62
SNRPB-201ENST00000381342 ERVK-9P63128 1117 aa18.93■□□□□ 0.62
SNRPB-201ENST00000381342 ERVK-24P63145 666 aa18.93■□□□□ 0.62
SNRPB-201ENST00000381342 IGDCC4Q8TDY8 1250 aa18.93■□□□□ 0.62
SNRPB-201ENST00000381342 KIFC2Q96AC6 838 aa18.93■□□□□ 0.62
SNRPB-201ENST00000381342 RNF208Q9H0X6 261 aa18.93■□□□□ 0.62
SNRPB-201ENST00000381342 GPCPD1Q9NPB8 672 aa18.93■□□□□ 0.62
SNRPB-201ENST00000381342 FEM1BQ9UK73 627 aa18.93■□□□□ 0.62
SNRPB-201ENST00000381342 SNHG28P0DPA3 235 aa18.92■□□□□ 0.62
SNRPB-201ENST00000381342 STAT2P52630 851 aa18.92■□□□□ 0.62
SNRPB-201ENST00000381342 TMEM87BQ96K49 555 aa18.92■□□□□ 0.62
SNRPB-201ENST00000381342 NUDT12Q9BQG2 462 aa18.92■□□□□ 0.62
SNRPB-201ENST00000381342 EIF5BO60841 1220 aaKnown RBP18.91■□□□□ 0.62
SNRPB-201ENST00000381342 GOLGA8HP0CJ92 632 aa18.91■□□□□ 0.62
SNRPB-201ENST00000381342 CCL5P13501 91 aa18.91■□□□□ 0.62
SNRPB-201ENST00000381342 CASTP20810 708 aaKnown RBP18.91■□□□□ 0.62
SNRPB-201ENST00000381342 ZNF543Q08ER8 600 aa18.91■□□□□ 0.62
SNRPB-201ENST00000381342 MTFR1Q15390 333 aa18.91■□□□□ 0.62
SNRPB-201ENST00000381342 WDR78Q5VTH9 848 aa18.91■□□□□ 0.62
SNRPB-201ENST00000381342 TTBK2Q6IQ55 1244 aa18.91■□□□□ 0.62
SNRPB-201ENST00000381342 BLOC1S2Q6QNY1 142 aa18.91■□□□□ 0.62
SNRPB-201ENST00000381342 DHX32Q7L7V1 743 aaKnown RBP18.91■□□□□ 0.62
SNRPB-201ENST00000381342 SOCS4Q8WXH5 440 aa18.91■□□□□ 0.62
SNRPB-201ENST00000381342 MTA3Q9BTC8 594 aa18.91■□□□□ 0.62
SNRPB-201ENST00000381342 WDR19Q8NEZ3 1342 aa18.91■□□□□ 0.62
SNRPB-201ENST00000381342 MYH6P13533 1939 aa18.9■□□□□ 0.62
SNRPB-201ENST00000381342 VWA5AO00534 786 aa18.9■□□□□ 0.62
SNRPB-201ENST00000381342 HMGB1P09429 215 aaKnown RBP18.9■□□□□ 0.62
SNRPB-201ENST00000381342 ELNP15502 786 aa18.9■□□□□ 0.62
SNRPB-201ENST00000381342 SLC16A2P36021 539 aa18.9■□□□□ 0.62
SNRPB-201ENST00000381342 EXOSC10Q01780 885 aaKnown RBP18.9■□□□□ 0.62
SNRPB-201ENST00000381342 Q3C1V9 767 aa18.9■□□□□ 0.62
SNRPB-201ENST00000381342 NFXL1Q6ZNB6 911 aa18.9■□□□□ 0.62
SNRPB-201ENST00000381342 PLEKHH3Q7Z736 793 aa18.9■□□□□ 0.62
SNRPB-201ENST00000381342 FAM160B2Q86V87 743 aa18.9■□□□□ 0.62
SNRPB-201ENST00000381342 MB21D1Q8N884 522 aa18.9■□□□□ 0.62
SNRPB-201ENST00000381342 PRPF38AQ8NAV1 312 aaKnown RBP18.9■□□□□ 0.62
SNRPB-201ENST00000381342 MYL10Q9BUA6 226 aa18.9■□□□□ 0.62
SNRPB-201ENST00000381342 ADAMTS5Q9UNA0 930 aa18.9■□□□□ 0.62
SNRPB-201ENST00000381342 IVNS1ABPQ9Y6Y0 642 aa18.9■□□□□ 0.62
SNRPB-201ENST00000381342 DOCK3Q8IZD9 2030 aa18.9■□□□□ 0.62
SNRPB-201ENST00000381342 INHAP05111 366 aa18.89■□□□□ 0.61
SNRPB-201ENST00000381342 GJB1P08034 283 aa18.89■□□□□ 0.61
SNRPB-201ENST00000381342 CAPN2P17655 700 aa18.89■□□□□ 0.61
SNRPB-201ENST00000381342 CYP2B6P20813 491 aa18.89■□□□□ 0.61
SNRPB-201ENST00000381342 RPS6KB1P23443 525 aa18.89■□□□□ 0.61
SNRPB-201ENST00000381342 PLS1Q14651 629 aa18.89■□□□□ 0.61
SNRPB-201ENST00000381342 TMEM132BQ14DG7 1078 aa18.89■□□□□ 0.61
SNRPB-201ENST00000381342 TRMT44Q8IYL2 757 aaKnown RBP18.89■□□□□ 0.61
SNRPB-201ENST00000381342 ZNF654Q8IZM8 581 aa18.89■□□□□ 0.61
SNRPB-201ENST00000381342 REPS2Q8NFH8 660 aa18.89■□□□□ 0.61
SNRPB-201ENST00000381342 CHURC1Q8WUH1 139 aa18.89■□□□□ 0.61
SNRPB-201ENST00000381342 PORCNQ9H237 461 aa18.89■□□□□ 0.61
SNRPB-201ENST00000381342 CPVLQ9H3G5 476 aa18.89■□□□□ 0.61
SNRPB-201ENST00000381342 CCDC69A6NI79 296 aa18.88■□□□□ 0.61
SNRPB-201ENST00000381342 HMGCRP04035 888 aa18.88■□□□□ 0.61
SNRPB-201ENST00000381342 PARP1P09874 1014 aaKnown RBP18.88■□□□□ 0.61
SNRPB-201ENST00000381342 PSMA5P28066 241 aa18.88■□□□□ 0.61
SNRPB-201ENST00000381342 RGS2P41220 211 aa18.88■□□□□ 0.61
SNRPB-201ENST00000381342 SNAP25P60880 206 aa18.88■□□□□ 0.61
SNRPB-201ENST00000381342 ASPRV1Q53RT3 343 aa18.88■□□□□ 0.61
SNRPB-201ENST00000381342 GPATCH4Q5T3I0 446 aaKnown RBP18.88■□□□□ 0.61
SNRPB-201ENST00000381342 SYDE2Q5VT97 1194 aa18.88■□□□□ 0.61
SNRPB-201ENST00000381342 GPR142Q7Z601 462 aa18.88■□□□□ 0.61
SNRPB-201ENST00000381342 CATIPQ7Z7H3 387 aa18.88■□□□□ 0.61
SNRPB-201ENST00000381342 RAB11FIP4Q86YS3 637 aa18.88■□□□□ 0.61
SNRPB-201ENST00000381342 UPF3BQ9BZI7 483 aaKnown RBP18.88■□□□□ 0.61
SNRPB-201ENST00000381342 SPATC1LQ9H0A9 340 aa18.88■□□□□ 0.61
SNRPB-201ENST00000381342 GJD2Q9UKL4 321 aa18.88■□□□□ 0.61
SNRPB-201ENST00000381342 ZNF214Q9UL59 606 aaPredicted RBP18.88■□□□□ 0.61
SNRPB-201ENST00000381342 PRR12Q9ULL5 1215 aa18.88■□□□□ 0.61
SNRPB-201ENST00000381342 ZNF236Q9UL36 1845 aa18.88■□□□□ 0.61
SNRPB-201ENST00000381342 KIAA0100Q14667 2235 aaKnown RBP18.88■□□□□ 0.61
SNRPB-201ENST00000381342 HTTP42858 3142 aa18.87■□□□□ 0.61
SNRPB-201ENST00000381342 PLA2G6O60733 806 aa18.87■□□□□ 0.61
SNRPB-201ENST00000381342 LIFRP42702 1097 aa18.87■□□□□ 0.61
SNRPB-201ENST00000381342 TROAPQ12815 778 aa18.87■□□□□ 0.61
SNRPB-201ENST00000381342 GRM4Q14833 912 aa18.87■□□□□ 0.61
SNRPB-201ENST00000381342 BTNL9Q6UXG8 535 aa18.87■□□□□ 0.61
SNRPB-201ENST00000381342 STAG2Q8N3U4 1231 aa18.87■□□□□ 0.61
SNRPB-201ENST00000381342 MOV10L1Q9BXT6 1211 aaKnown RBP18.87■□□□□ 0.61
SNRPB-201ENST00000381342 SLC38A10Q9HBR0 1119 aa18.87■□□□□ 0.61
SNRPB-201ENST00000381342 CTDP1Q9Y5B0 961 aaPredicted RBP18.87■□□□□ 0.61
SNRPB-201ENST00000381342 RBBP6Q7Z6E9 1792 aaKnown RBP18.86■□□□□ 0.61
SNRPB-201ENST00000381342 ZBED4O75132 1171 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms