RNA–Protein interactions for RNA: ENST00000381037.4

CDPF1-202, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 1 (best)

Gene CDPF1, Length 1,600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-202ENST00000381037 RPS6KB1P23443 525 aa23.36■■□□□ 1.33
CDPF1-202ENST00000381037 PSMA5P28066 241 aa23.36■■□□□ 1.33
CDPF1-202ENST00000381037 BLOC1S2Q6QNY1 142 aa23.36■■□□□ 1.33
CDPF1-202ENST00000381037 SAMD1Q6SPF0 538 aaPredicted RBP23.36■■□□□ 1.33
CDPF1-202ENST00000381037 FBXL16Q8N461 479 aa23.36■■□□□ 1.33
CDPF1-202ENST00000381037 SPATC1LQ9H0A9 340 aa23.36■■□□□ 1.33
CDPF1-202ENST00000381037 ATP2A1O14983 1001 aa23.35■■□□□ 1.33
CDPF1-202ENST00000381037 GOLGA8HP0CJ92 632 aa23.35■■□□□ 1.33
CDPF1-202ENST00000381037 FDX1P10109 184 aa23.35■■□□□ 1.33
CDPF1-202ENST00000381037 SLC16A2P36021 539 aa23.35■■□□□ 1.33
CDPF1-202ENST00000381037 KIF22Q14807 665 aa23.35■■□□□ 1.33
CDPF1-202ENST00000381037 ASPRV1Q53RT3 343 aa23.35■■□□□ 1.33
CDPF1-202ENST00000381037 CTU1Q7Z7A3 348 aaKnown RBP23.35■■□□□ 1.33
CDPF1-202ENST00000381037 MOV10L1Q9BXT6 1211 aaKnown RBP23.35■■□□□ 1.33
CDPF1-202ENST00000381037 AGXT2Q9BYV1 514 aa23.35■■□□□ 1.33
CDPF1-202ENST00000381037 EFCC1Q9HA90 598 aa23.35■■□□□ 1.33
CDPF1-202ENST00000381037 MAD2L2Q9UI95 211 aa23.35■■□□□ 1.33
CDPF1-202ENST00000381037 PALM3A6NDB9 673 aaPredicted RBP23.34■■□□□ 1.33
CDPF1-202ENST00000381037 GNRH1P01148 92 aa23.34■■□□□ 1.33
CDPF1-202ENST00000381037 CASTP20810 708 aaKnown RBP23.34■■□□□ 1.33
CDPF1-202ENST00000381037 STAG2Q8N3U4 1231 aa23.34■■□□□ 1.33
CDPF1-202ENST00000381037 ECM2O94769 699 aaPredicted RBP23.33■■□□□ 1.33
CDPF1-202ENST00000381037 FCGRTP55899 365 aa23.33■■□□□ 1.33
CDPF1-202ENST00000381037 GRM4Q14833 912 aa23.33■■□□□ 1.33
CDPF1-202ENST00000381037 RUFY3Q7L099 469 aa23.33■■□□□ 1.33
CDPF1-202ENST00000381037 CATIPQ7Z7H3 387 aa23.33■■□□□ 1.33
CDPF1-202ENST00000381037 ZNF654Q8IZM8 581 aa23.33■■□□□ 1.33
CDPF1-202ENST00000381037 MAP3K14Q99558 947 aa23.33■■□□□ 1.33
CDPF1-202ENST00000381037 ISY1Q9ULR0 285 aaKnown RBP23.33■■□□□ 1.33
CDPF1-202ENST00000381037 TRIM17Q9Y577 477 aa23.33■■□□□ 1.33
CDPF1-202ENST00000381037 ZNF536O15090 1300 aa23.33■■□□□ 1.33
CDPF1-202ENST00000381037 FMNL1O95466 1100 aaPredicted RBP23.33■■□□□ 1.32
CDPF1-202ENST00000381037 PARP1P09874 1014 aaKnown RBP23.33■■□□□ 1.32
CDPF1-202ENST00000381037 MAPK4P31152 587 aa23.33■■□□□ 1.32
CDPF1-202ENST00000381037 CCNA1P78396 465 aa23.33■■□□□ 1.32
CDPF1-202ENST00000381037 ARHGEF6Q15052 776 aa23.33■■□□□ 1.32
CDPF1-202ENST00000381037 SYDE2Q5VT97 1194 aa23.33■■□□□ 1.32
CDPF1-202ENST00000381037 SHCBP1Q8NEM2 672 aa23.33■■□□□ 1.32
CDPF1-202ENST00000381037 CPVLQ9H3G5 476 aa23.33■■□□□ 1.32
CDPF1-202ENST00000381037 COL11A1P12107 1806 aaPredicted RBP23.32■■□□□ 1.32
CDPF1-202ENST00000381037 ZBED4O75132 1171 aa23.32■■□□□ 1.32
CDPF1-202ENST00000381037 DDAH1O94760 285 aa23.32■■□□□ 1.32
CDPF1-202ENST00000381037 STAT3P40763 770 aa23.32■■□□□ 1.32
CDPF1-202ENST00000381037 OAZ1P54368 228 aa23.32■■□□□ 1.32
CDPF1-202ENST00000381037 IKQ13123 557 aaPredicted RBP23.32■■□□□ 1.32
CDPF1-202ENST00000381037 RIOX2Q8IUF8 465 aa23.32■■□□□ 1.32
CDPF1-202ENST00000381037 RANBP17Q9H2T7 1088 aaKnown RBP23.32■■□□□ 1.32
CDPF1-202ENST00000381037 GJD2Q9UKL4 321 aa23.32■■□□□ 1.32
CDPF1-202ENST00000381037 BRPF3Q9ULD4 1205 aa23.32■■□□□ 1.32
CDPF1-202ENST00000381037 CCDC69A6NI79 296 aa23.31■■□□□ 1.32
CDPF1-202ENST00000381037 TNPO2O14787 897 aaKnown RBP23.31■■□□□ 1.32
CDPF1-202ENST00000381037 SLC35G1Q2M3R5 365 aa23.31■■□□□ 1.32
CDPF1-202ENST00000381037 MYL10Q9BUA6 226 aa23.31■■□□□ 1.32
CDPF1-202ENST00000381037 TEX13BQ9BXU2 312 aa23.31■■□□□ 1.32
CDPF1-202ENST00000381037 UBA5Q9GZZ9 404 aa23.31■■□□□ 1.32
CDPF1-202ENST00000381037 SRRDQ9UH36 339 aa23.31■■□□□ 1.32
CDPF1-202ENST00000381037 MGAMO43451 1857 aa23.31■■□□□ 1.32
CDPF1-202ENST00000381037 ERCC3P19447 782 aa23.3■■□□□ 1.32
CDPF1-202ENST00000381037 PLS1Q14651 629 aa23.3■■□□□ 1.32
CDPF1-202ENST00000381037 APOA5Q6Q788 366 aa23.3■■□□□ 1.32
CDPF1-202ENST00000381037 NFXL1Q6ZNB6 911 aa23.3■■□□□ 1.32
CDPF1-202ENST00000381037 Q6ZUG5 572 aa23.3■■□□□ 1.32
CDPF1-202ENST00000381037 GPR142Q7Z601 462 aa23.3■■□□□ 1.32
CDPF1-202ENST00000381037 UPF3BQ9BZI7 483 aaKnown RBP23.3■■□□□ 1.32
CDPF1-202ENST00000381037 RIPK3Q9Y572 518 aa23.3■■□□□ 1.32
CDPF1-202ENST00000381037 CENPFP49454 3210 aa23.3■■□□□ 1.32
CDPF1-202ENST00000381037 KLRF2D3W0D1 207 aa23.3■■□□□ 1.32
CDPF1-202ENST00000381037 SNAP25P60880 206 aa23.3■■□□□ 1.32
CDPF1-202ENST00000381037 MROH8Q9H579 483 aa23.3■■□□□ 1.32
CDPF1-202ENST00000381037 RAVER2Q9HCJ3 691 aaKnown RBP23.3■■□□□ 1.32
CDPF1-202ENST00000381037 PTPN22Q9Y2R2 807 aa23.3■■□□□ 1.32
CDPF1-202ENST00000381037 SLC12A7Q9Y666 1083 aa23.3■■□□□ 1.32
CDPF1-202ENST00000381037 CYP46A1Q9Y6A2 500 aa23.3■■□□□ 1.32
CDPF1-202ENST00000381037 DOCK3Q8IZD9 2030 aa23.29■■□□□ 1.32
CDPF1-202ENST00000381037 SLC25A27O95847 323 aa23.29■■□□□ 1.32
CDPF1-202ENST00000381037 PKN2Q16513 984 aaKnown RBP23.29■■□□□ 1.32
CDPF1-202ENST00000381037 ADGRF4Q8IZF3 695 aa23.29■■□□□ 1.32
CDPF1-202ENST00000381037 CPXCR1Q8N123 301 aa23.29■■□□□ 1.32
CDPF1-202ENST00000381037 GABRQQ9UN88 632 aa23.29■■□□□ 1.32
CDPF1-202ENST00000381037 PRMT2P55345 433 aa23.28■■□□□ 1.32
CDPF1-202ENST00000381037 EVCP57679 992 aa23.28■■□□□ 1.32
CDPF1-202ENST00000381037 PRKCZQ05513 592 aa23.28■■□□□ 1.32
CDPF1-202ENST00000381037 MORN1Q5T089 497 aa23.28■■□□□ 1.32
CDPF1-202ENST00000381037 SNRNP48Q6IEG0 339 aaKnown RBP23.28■■□□□ 1.32
CDPF1-202ENST00000381037 PLEKHH3Q7Z736 793 aa23.28■■□□□ 1.32
CDPF1-202ENST00000381037 NBPF11Q86T75 865 aa23.28■■□□□ 1.32
CDPF1-202ENST00000381037 NUP133Q8WUM0 1156 aa23.28■■□□□ 1.32
CDPF1-202ENST00000381037 USP6NLQ92738 828 aa23.28■■□□□ 1.32
CDPF1-202ENST00000381037 BRF1Q92994 677 aa23.28■■□□□ 1.32
CDPF1-202ENST00000381037 COA7Q96BR5 231 aa23.28■■□□□ 1.32
CDPF1-202ENST00000381037 MCOLN1Q9GZU1 580 aa23.28■■□□□ 1.32
CDPF1-202ENST00000381037 JMJD4Q9H9V9 463 aa23.28■■□□□ 1.32
CDPF1-202ENST00000381037 CALM1P0DP23 149 aa23.27■■□□□ 1.32
CDPF1-202ENST00000381037 CALM2P0DP24 149 aa23.27■■□□□ 1.32
CDPF1-202ENST00000381037 CALM3P0DP25 149 aa23.27■■□□□ 1.32
CDPF1-202ENST00000381037 RXRAP19793 462 aa23.27■■□□□ 1.32
CDPF1-202ENST00000381037 HOXD10P28358 340 aa23.27■■□□□ 1.32
CDPF1-202ENST00000381037 TOB2Q14106 344 aaPredicted RBP23.27■■□□□ 1.32
CDPF1-202ENST00000381037 MTMR8Q96EF0 704 aa23.27■■□□□ 1.32
CDPF1-202ENST00000381037 AGBL1Q96MI9 1066 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms