RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 DDX25Q9UHL0 483 aaKnown RBP13.69□□□□□ -0.22
GABPB1-203ENST00000380877 SLU7O95391 586 aaKnown RBP13.68□□□□□ -0.22
GABPB1-203ENST00000380877 CKAP4Q07065 602 aaKnown RBP13.68□□□□□ -0.22
GABPB1-203ENST00000380877 PRR5LQ6MZQ0 368 aa13.68□□□□□ -0.22
GABPB1-203ENST00000380877 TPH2Q8IWU9 490 aa13.68□□□□□ -0.22
GABPB1-203ENST00000380877 GTPBP6O43824 516 aaPredicted RBP13.68□□□□□ -0.22
GABPB1-203ENST00000380877 FLOT1O75955 427 aa13.68□□□□□ -0.22
GABPB1-203ENST00000380877 FOSP01100 380 aaPredicted RBP13.68□□□□□ -0.22
GABPB1-203ENST00000380877 KRT9P35527 623 aa13.68□□□□□ -0.22
GABPB1-203ENST00000380877 ZNF569Q5MCW4 686 aa13.68□□□□□ -0.22
GABPB1-203ENST00000380877 MYO5BQ9ULV0 1848 aa13.68□□□□□ -0.22
GABPB1-203ENST00000380877 NEFHP12036 1026 aa13.68□□□□□ -0.22
GABPB1-203ENST00000380877 ERCC3P19447 782 aa13.68□□□□□ -0.22
GABPB1-203ENST00000380877 CACNB3P54284 484 aa13.68□□□□□ -0.22
GABPB1-203ENST00000380877 MYCT1Q8N699 235 aa13.68□□□□□ -0.22
GABPB1-203ENST00000380877 SRRTQ9BXP5 876 aaKnown RBP13.68□□□□□ -0.22
GABPB1-203ENST00000380877 PNPLA7Q6ZV29 1317 aa13.68□□□□□ -0.22
GABPB1-203ENST00000380877 SLC44A5Q8NCS7 719 aa13.67□□□□□ -0.22
GABPB1-203ENST00000380877 MTA3Q9BTC8 594 aa13.67□□□□□ -0.22
GABPB1-203ENST00000380877 CWC15Q9P013 229 aaKnown RBP13.67□□□□□ -0.22
GABPB1-203ENST00000380877 CNTNAP4Q9C0A0 1308 aa13.67□□□□□ -0.22
GABPB1-203ENST00000380877 TMTC3Q6ZXV5 915 aa13.67□□□□□ -0.22
GABPB1-203ENST00000380877 FOXP4Q8IVH2 680 aaPredicted RBP13.67□□□□□ -0.22
GABPB1-203ENST00000380877 ENAHQ8N8S7 591 aaPredicted RBP13.67□□□□□ -0.22
GABPB1-203ENST00000380877 FAM212AQ96EL1 285 aa13.67□□□□□ -0.22
GABPB1-203ENST00000380877 IVNS1ABPQ9Y6Y0 642 aa13.67□□□□□ -0.22
GABPB1-203ENST00000380877 MYOM1P52179 1685 aa13.67□□□□□ -0.22
GABPB1-203ENST00000380877 MROH7-TTC4A0A0A0MT08 1334 aa13.67□□□□□ -0.22
GABPB1-203ENST00000380877 DALRD3Q5D0E6 543 aaKnown RBP13.67□□□□□ -0.22
GABPB1-203ENST00000380877 LY9Q9HBG7 655 aa13.67□□□□□ -0.22
GABPB1-203ENST00000380877 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.67□□□□□ -0.22
GABPB1-203ENST00000380877 CRKP46108 304 aa13.67□□□□□ -0.22
GABPB1-203ENST00000380877 DPY19L2Q6NUT2 758 aa13.67□□□□□ -0.22
GABPB1-203ENST00000380877 INTS5Q6P9B9 1019 aaKnown RBP13.67□□□□□ -0.22
GABPB1-203ENST00000380877 GPBP1Q86WP2 473 aa13.67□□□□□ -0.22
GABPB1-203ENST00000380877 COA7Q96BR5 231 aa13.67□□□□□ -0.22
GABPB1-203ENST00000380877 CALUO43852 315 aaPredicted RBP13.66□□□□□ -0.22
GABPB1-203ENST00000380877 BMP3P12645 472 aa13.66□□□□□ -0.22
GABPB1-203ENST00000380877 CTR9Q6PD62 1173 aa13.66□□□□□ -0.22
GABPB1-203ENST00000380877 NLRX1Q86UT6 975 aa13.66□□□□□ -0.22
GABPB1-203ENST00000380877 SP8Q8IXZ3 490 aa13.66□□□□□ -0.22
GABPB1-203ENST00000380877 SLFN12Q8IYM2 578 aa13.66□□□□□ -0.22
GABPB1-203ENST00000380877 C17orf53Q8N3J3 647 aaPredicted RBP13.66□□□□□ -0.22
GABPB1-203ENST00000380877 IL25Q9H293 177 aa13.66□□□□□ -0.22
GABPB1-203ENST00000380877 GCNT3O95395 438 aa13.66□□□□□ -0.22
GABPB1-203ENST00000380877 SETQ01105 290 aaPredicted RBP13.66□□□□□ -0.22
GABPB1-203ENST00000380877 CCDC122Q5T0U0 273 aa13.66□□□□□ -0.22
GABPB1-203ENST00000380877 SPECC1LQ69YQ0 1117 aa13.66□□□□□ -0.22
GABPB1-203ENST00000380877 SULF1Q8IWU6 871 aa13.66□□□□□ -0.22
GABPB1-203ENST00000380877 ZNF512BQ96KM6 892 aaPredicted RBP13.66□□□□□ -0.22
GABPB1-203ENST00000380877 IFT74Q96LB3 600 aa13.66□□□□□ -0.22
GABPB1-203ENST00000380877 ALDH8A1Q9H2A2 487 aaPredicted RBP13.66□□□□□ -0.22
GABPB1-203ENST00000380877 MRPL44Q9H9J2 332 aaKnown RBP13.66□□□□□ -0.22
GABPB1-203ENST00000380877 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.66□□□□□ -0.22
GABPB1-203ENST00000380877 V9GYY5 206 aaPredicted RBP13.66□□□□□ -0.22
GABPB1-203ENST00000380877 ADGRB2O60241 1585 aa13.66□□□□□ -0.22
GABPB1-203ENST00000380877 CIAPIN1Q6FI81 312 aa13.66□□□□□ -0.22
GABPB1-203ENST00000380877 TBCKQ8TEA7 893 aa13.66□□□□□ -0.22
GABPB1-203ENST00000380877 TIGD1Q96MW7 591 aa13.66□□□□□ -0.22
GABPB1-203ENST00000380877 FANCLQ9NW38 375 aa13.66□□□□□ -0.22
GABPB1-203ENST00000380877 CCPG1Q9ULG6 757 aa13.66□□□□□ -0.22
GABPB1-203ENST00000380877 PCDHB6Q9Y5E3 794 aa13.66□□□□□ -0.22
GABPB1-203ENST00000380877 SIGLEC1Q9BZZ2 1709 aa13.66□□□□□ -0.22
GABPB1-203ENST00000380877 UBN2Q6ZU65 1347 aa13.66□□□□□ -0.22
GABPB1-203ENST00000380877 LAD1O00515 517 aa13.66□□□□□ -0.22
GABPB1-203ENST00000380877 EAPPQ56P03 285 aaPredicted RBP13.66□□□□□ -0.22
GABPB1-203ENST00000380877 TAX1BP1Q86VP1 789 aa13.66□□□□□ -0.22
GABPB1-203ENST00000380877 NSUN4Q96CB9 384 aaKnown RBP13.66□□□□□ -0.22
GABPB1-203ENST00000380877 FSD2A1L4K1 749 aa13.65□□□□□ -0.22
GABPB1-203ENST00000380877 NOP56O00567 594 aaKnown RBP13.65□□□□□ -0.22
GABPB1-203ENST00000380877 ARHGAP6O43182 974 aa13.65□□□□□ -0.22
GABPB1-203ENST00000380877 CTNNA2P26232 953 aa13.65□□□□□ -0.22
GABPB1-203ENST00000380877 TMEM87AQ8NBN3 555 aa13.65□□□□□ -0.22
GABPB1-203ENST00000380877 TESPA1A2RU30 521 aaPredicted RBP13.65□□□□□ -0.22
GABPB1-203ENST00000380877 hCG_1984214I3L0E3 225 aa13.65□□□□□ -0.22
GABPB1-203ENST00000380877 HARSP12081 509 aaKnown RBP13.65□□□□□ -0.22
GABPB1-203ENST00000380877 SEPT7Q16181 437 aaKnown RBP13.65□□□□□ -0.22
GABPB1-203ENST00000380877 PLA2G4DQ86XP0 818 aa13.65□□□□□ -0.22
GABPB1-203ENST00000380877 ZNF713Q8N859 430 aaPredicted RBP13.65□□□□□ -0.22
GABPB1-203ENST00000380877 PPP1R9BQ96SB3 815 aa13.65□□□□□ -0.22
GABPB1-203ENST00000380877 TMEM47Q9BQJ4 181 aa13.65□□□□□ -0.22
GABPB1-203ENST00000380877 NUP58Q9BVL2 599 aa13.65□□□□□ -0.22
GABPB1-203ENST00000380877 RRAGDQ9NQL2 400 aaPredicted RBP13.65□□□□□ -0.22
GABPB1-203ENST00000380877 GSTTP1A0A1W2PQM5 241 aa13.65□□□□□ -0.22
GABPB1-203ENST00000380877 NMT2O60551 498 aa13.65□□□□□ -0.22
GABPB1-203ENST00000380877 GPR162Q16538 588 aa13.65□□□□□ -0.22
GABPB1-203ENST00000380877 MIER3Q7Z3K6 550 aa13.65□□□□□ -0.22
GABPB1-203ENST00000380877 CCDC84Q86UT8 332 aaPredicted RBP13.65□□□□□ -0.22
GABPB1-203ENST00000380877 PLVAPQ9BX97 442 aa13.65□□□□□ -0.22
GABPB1-203ENST00000380877 NCBP1Q09161 790 aaKnown RBP13.65□□□□□ -0.22
GABPB1-203ENST00000380877 CYP26C1Q6V0L0 522 aa13.65□□□□□ -0.22
GABPB1-203ENST00000380877 MCF2L2Q86YR7 1114 aa13.65□□□□□ -0.22
GABPB1-203ENST00000380877 PGBD1Q96JS3 809 aa13.65□□□□□ -0.22
GABPB1-203ENST00000380877 GSDMAQ96QA5 445 aa13.65□□□□□ -0.22
GABPB1-203ENST00000380877 ZDHHC9Q9Y397 364 aa13.65□□□□□ -0.22
GABPB1-203ENST00000380877 ECE2O60344 883 aa13.64□□□□□ -0.23
GABPB1-203ENST00000380877 RPN1P04843 607 aaKnown RBP13.64□□□□□ -0.23
GABPB1-203ENST00000380877 EXOSC10Q01780 885 aaKnown RBP13.64□□□□□ -0.23
GABPB1-203ENST00000380877 EN1Q05925 392 aaPredicted RBP13.64□□□□□ -0.23
GABPB1-203ENST00000380877 DPCR1Q3MIW9 517 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms