RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 SH3RF1Q7Z6J0 888 aa21.94■■□□□ 1.1
GMDS-201ENST00000380805 USP17L5A8MUK1 530 aa21.93■■□□□ 1.1
GMDS-201ENST00000380805 PYM1Q9BRP8 204 aaKnown RBP21.93■■□□□ 1.1
GMDS-201ENST00000380805 KCNF1Q9H3M0 494 aa21.93■■□□□ 1.1
GMDS-201ENST00000380805 DNAJC18Q9H819 358 aa21.93■■□□□ 1.1
GMDS-201ENST00000380805 TTC12Q9H892 705 aaPredicted RBP21.93■■□□□ 1.1
GMDS-201ENST00000380805 FAM198AQ9UFP1 575 aa21.93■■□□□ 1.1
GMDS-201ENST00000380805 ARFGEF1Q9Y6D6 1849 aa21.93■■□□□ 1.1
GMDS-201ENST00000380805 OFD1O75665 1012 aa21.92■■□□□ 1.1
GMDS-201ENST00000380805 SLFN14P0C7P3 912 aa21.92■■□□□ 1.1
GMDS-201ENST00000380805 DALRD3Q5D0E6 543 aaKnown RBP21.92■■□□□ 1.1
GMDS-201ENST00000380805 SYMPKQ92797 1274 aaKnown RBP21.92■■□□□ 1.1
GMDS-201ENST00000380805 CCDC34Q96HJ3 373 aa21.92■■□□□ 1.1
GMDS-201ENST00000380805 BCS1LQ9Y276 419 aa21.92■■□□□ 1.1
GMDS-201ENST00000380805 A0A087X0B3 334 aa21.92■■□□□ 1.1
GMDS-201ENST00000380805 CCDC194A0A1B0GVG4 234 aa21.92■■□□□ 1.1
GMDS-201ENST00000380805 FOXN1O15353 648 aa21.92■■□□□ 1.1
GMDS-201ENST00000380805 MYO1BO43795 1136 aa21.92■■□□□ 1.1
GMDS-201ENST00000380805 C21orf2O43822 256 aa21.92■■□□□ 1.1
GMDS-201ENST00000380805 SPC24Q8NBT2 197 aa21.92■■□□□ 1.1
GMDS-201ENST00000380805 EPSTI1Q96J88 318 aa21.92■■□□□ 1.1
GMDS-201ENST00000380805 PSMD1Q99460 953 aa21.92■■□□□ 1.1
GMDS-201ENST00000380805 SEC63Q9UGP8 760 aaKnown RBP21.92■■□□□ 1.1
GMDS-201ENST00000380805 LAD1O00515 517 aa21.91■■□□□ 1.1
GMDS-201ENST00000380805 GNA11P29992 359 aa21.91■■□□□ 1.1
GMDS-201ENST00000380805 ZFPM1Q8IX07 1006 aa21.91■■□□□ 1.1
GMDS-201ENST00000380805 PI4KBQ9UBF8 816 aa21.91■■□□□ 1.1
GMDS-201ENST00000380805 YDJCA8MPS7 323 aa21.9■■□□□ 1.1
GMDS-201ENST00000380805 BMP6P22004 513 aa21.9■■□□□ 1.1
GMDS-201ENST00000380805 LONP1P36776 959 aaKnown RBP21.9■■□□□ 1.1
GMDS-201ENST00000380805 TPM4P67936 248 aa21.9■■□□□ 1.1
GMDS-201ENST00000380805 ZNF543Q08ER8 600 aa21.9■■□□□ 1.1
GMDS-201ENST00000380805 MORC3Q14149 939 aa21.9■■□□□ 1.1
GMDS-201ENST00000380805 CCDC93Q567U6 631 aa21.9■■□□□ 1.1
GMDS-201ENST00000380805 TATDN1Q6P1N9 297 aa21.9■■□□□ 1.1
GMDS-201ENST00000380805 KRT25Q7Z3Z0 450 aa21.9■■□□□ 1.1
GMDS-201ENST00000380805 RTKN2Q8IZC4 609 aa21.9■■□□□ 1.1
GMDS-201ENST00000380805 HSD3B7Q9H2F3 369 aa21.9■■□□□ 1.1
GMDS-201ENST00000380805 C6orf50Q9HD87 102 aa21.9■■□□□ 1.1
GMDS-201ENST00000380805 CLIP2Q9UDT6 1046 aa21.9■■□□□ 1.1
GMDS-201ENST00000380805 MAN1B1Q9UKM7 699 aa21.9■■□□□ 1.1
GMDS-201ENST00000380805 MTMR7Q9Y216 660 aa21.9■■□□□ 1.1
GMDS-201ENST00000380805 VWA3AA6NCI4 1184 aa21.89■■□□□ 1.1
GMDS-201ENST00000380805 ENTPD3O75355 529 aa21.89■■□□□ 1.1
GMDS-201ENST00000380805 PRR29P0C7W0 189 aa21.89■■□□□ 1.1
GMDS-201ENST00000380805 MCM7P33993 719 aa21.89■■□□□ 1.1
GMDS-201ENST00000380805 NAPAP54920 295 aa21.89■■□□□ 1.1
GMDS-201ENST00000380805 MYL5Q02045 173 aa21.89■■□□□ 1.1
GMDS-201ENST00000380805 ORC2Q13416 577 aaPredicted RBP21.89■■□□□ 1.1
GMDS-201ENST00000380805 E2F4Q16254 413 aa21.89■■□□□ 1.1
GMDS-201ENST00000380805 IL17AQ16552 155 aa21.89■■□□□ 1.1
GMDS-201ENST00000380805 SH3BP5LQ7L8J4 393 aa21.89■■□□□ 1.1
GMDS-201ENST00000380805 LRRC47Q8N1G4 583 aaKnown RBP21.89■■□□□ 1.1
GMDS-201ENST00000380805 RASGRP4Q8TDF6 673 aa21.89■■□□□ 1.1
GMDS-201ENST00000380805 SMARCE1Q969G3 411 aa21.89■■□□□ 1.1
GMDS-201ENST00000380805 MKL1Q969V6 931 aa21.89■■□□□ 1.1
GMDS-201ENST00000380805 ZNF830Q96NB3 372 aaPredicted RBP21.89■■□□□ 1.1
GMDS-201ENST00000380805 CPVLQ9H3G5 476 aa21.89■■□□□ 1.1
GMDS-201ENST00000380805 PCDHAC2Q9Y5I4 1007 aa21.89■■□□□ 1.1
GMDS-201ENST00000380805 PPIP5K2O43314 1243 aa21.89■■□□□ 1.09
GMDS-201ENST00000380805 PRPHP41219 470 aa21.89■■□□□ 1.09
GMDS-201ENST00000380805 CT47A1Q5JQC4 288 aaPredicted RBP21.89■■□□□ 1.09
GMDS-201ENST00000380805 GPATCH4Q5T3I0 446 aaKnown RBP21.89■■□□□ 1.09
GMDS-201ENST00000380805 PPP1R18Q6NYC8 613 aa21.89■■□□□ 1.09
GMDS-201ENST00000380805 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.89■■□□□ 1.09
GMDS-201ENST00000380805 MLKLQ8NB16 471 aa21.89■■□□□ 1.09
GMDS-201ENST00000380805 PIGSQ96S52 555 aa21.89■■□□□ 1.09
GMDS-201ENST00000380805 VPS33BQ9H267 617 aa21.89■■□□□ 1.09
GMDS-201ENST00000380805 SPTLC3Q9NUV7 552 aa21.89■■□□□ 1.09
GMDS-201ENST00000380805 DDTLA6NHG4 134 aaPredicted RBP21.88■■□□□ 1.09
GMDS-201ENST00000380805 PTGS1P23219 599 aa21.88■■□□□ 1.09
GMDS-201ENST00000380805 CCDC186Q7Z3E2 898 aa21.88■■□□□ 1.09
GMDS-201ENST00000380805 PDILTQ8N807 584 aa21.88■■□□□ 1.09
GMDS-201ENST00000380805 KIAA1524Q8TCG1 905 aa21.88■■□□□ 1.09
GMDS-201ENST00000380805 SMCO2A6NFE2 343 aa21.87■■□□□ 1.09
GMDS-201ENST00000380805 DHX58Q96C10 678 aa21.87■■□□□ 1.09
GMDS-201ENST00000380805 MTMR8Q96EF0 704 aa21.87■■□□□ 1.09
GMDS-201ENST00000380805 NYAP2Q9P242 653 aa21.87■■□□□ 1.09
GMDS-201ENST00000380805 DACH1Q9UI36 760 aa21.87■■□□□ 1.09
GMDS-201ENST00000380805 COL4A5P29400 1685 aa21.87■■□□□ 1.09
GMDS-201ENST00000380805 SMC2O95347 1197 aa21.86■■□□□ 1.09
GMDS-201ENST00000380805 YBX3P16989 372 aaKnown RBP eCLIP21.86■■□□□ 1.099e-9■□□□□ 8.4
GMDS-201ENST00000380805 HOMER1Q86YM7 354 aa21.86■■□□□ 1.09
GMDS-201ENST00000380805 CLEC10AQ8IUN9 316 aa21.86■■□□□ 1.09
GMDS-201ENST00000380805 PAGE5Q96GU1 130 aa21.86■■□□□ 1.09
GMDS-201ENST00000380805 FRMPD2Q68DX3 1309 aaPredicted RBP21.86■■□□□ 1.09
GMDS-201ENST00000380805 RBM5P52756 815 aaKnown RBP eCLIP21.86■■□□□ 1.09
GMDS-201ENST00000380805 NONOQ15233 471 aaKnown RBP eCLIP21.86■■□□□ 1.09
GMDS-201ENST00000380805 INF2Q27J81 1249 aa21.86■■□□□ 1.09
GMDS-201ENST00000380805 SOGA3Q5TF21 947 aa21.86■■□□□ 1.09
GMDS-201ENST00000380805 DRC7Q8IY82 874 aa21.86■■□□□ 1.09
GMDS-201ENST00000380805 IQUBQ8NA54 791 aa21.86■■□□□ 1.09
GMDS-201ENST00000380805 UBA5Q9GZZ9 404 aa21.86■■□□□ 1.09
GMDS-201ENST00000380805 CACNB3P54284 484 aa21.85■■□□□ 1.09
GMDS-201ENST00000380805 DPYDQ12882 1025 aa21.85■■□□□ 1.09
GMDS-201ENST00000380805 CCDC144BQ3MJ40 725 aa21.85■■□□□ 1.09
GMDS-201ENST00000380805 CFAP100Q494V2 611 aa21.85■■□□□ 1.09
GMDS-201ENST00000380805 ISM2Q6H9L7 571 aa21.85■■□□□ 1.09
GMDS-201ENST00000380805 PDXDC2PQ6P474 469 aa21.85■■□□□ 1.09
GMDS-201ENST00000380805 GSDMAQ96QA5 445 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms