RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 KIFC2Q96AC6 838 aa27.61■■■□□ 2.01
U2AF1-202ENST00000380276 NYAP2Q9P242 653 aa27.61■■■□□ 2.01
U2AF1-202ENST00000380276 ZHX1Q9UKY1 873 aaPredicted RBP27.61■■■□□ 2.01
U2AF1-202ENST00000380276 SMCHD1A6NHR9 2005 aa27.6■■■□□ 2.01
U2AF1-202ENST00000380276 A0A1W2PQ45 241 aaPredicted RBP27.6■■■□□ 2.01
U2AF1-202ENST00000380276 A0A1W2PQY0 241 aa27.6■■■□□ 2.01
U2AF1-202ENST00000380276 ZBED4O75132 1171 aa27.6■■■□□ 2.01
U2AF1-202ENST00000380276 CLTBP09497 229 aa27.6■■■□□ 2.01
U2AF1-202ENST00000380276 ZNF865P0CJ78 1059 aaPredicted RBP27.6■■■□□ 2.01
U2AF1-202ENST00000380276 ZNF444Q8N0Y2 327 aaPredicted RBP27.6■■■□□ 2.01
U2AF1-202ENST00000380276 TACC3Q9Y6A5 838 aa27.6■■■□□ 2.01
U2AF1-202ENST00000380276 GREB1LQ9C091 1923 aaPredicted RBP27.6■■■□□ 2.01
U2AF1-202ENST00000380276 RNF113AO15541 343 aaKnown RBP27.59■■■□□ 2.01
U2AF1-202ENST00000380276 GPAA1O43292 621 aa27.59■■■□□ 2.01
U2AF1-202ENST00000380276 PRDM1O75626 825 aa27.59■■■□□ 2.01
U2AF1-202ENST00000380276 RAG1P15918 1043 aa27.59■■■□□ 2.01
U2AF1-202ENST00000380276 C1orf53Q5VUE5 145 aa27.59■■■□□ 2.01
U2AF1-202ENST00000380276 GIMAP6Q6P9H5 292 aa27.59■■■□□ 2.01
U2AF1-202ENST00000380276 PRPF38AQ8NAV1 312 aaKnown RBP27.59■■■□□ 2.01
U2AF1-202ENST00000380276 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.58■■■□□ 2.01
U2AF1-202ENST00000380276 ZNF287Q9HBT7 754 aa27.58■■■□□ 2.01
U2AF1-202ENST00000380276 RAVER2Q9HCJ3 691 aaKnown RBP27.58■■■□□ 2.01
U2AF1-202ENST00000380276 FAM184BQ9ULE4 1060 aa27.58■■■□□ 2.01
U2AF1-202ENST00000380276 RIPK3Q9Y572 518 aa27.58■■■□□ 2.01
U2AF1-202ENST00000380276 ROBO3Q96MS0 1386 aa27.58■■■□□ 2.01
U2AF1-202ENST00000380276 LRRC47Q8N1G4 583 aaKnown RBP27.57■■■□□ 2
U2AF1-202ENST00000380276 RNPC3Q96LT9 517 aaKnown RBP27.57■■■□□ 2
U2AF1-202ENST00000380276 EPB41L4AQ9HCS5 686 aaPredicted RBP27.57■■■□□ 2
U2AF1-202ENST00000380276 STARD7Q9NQZ5 370 aa27.57■■■□□ 2
U2AF1-202ENST00000380276 TMEM39AQ9NV64 488 aa27.57■■■□□ 2
U2AF1-202ENST00000380276 SYNRGQ9UMZ2 1314 aa27.57■■■□□ 2
U2AF1-202ENST00000380276 MYH4Q9Y623 1939 aa27.57■■■□□ 2
U2AF1-202ENST00000380276 M0R2C6 588 aa27.56■■■□□ 2
U2AF1-202ENST00000380276 ZFYP08048 801 aaPredicted RBP27.56■■■□□ 2
U2AF1-202ENST00000380276 GNAT2P19087 354 aa27.56■■■□□ 2
U2AF1-202ENST00000380276 ANKRD35Q8N283 1001 aa27.56■■■□□ 2
U2AF1-202ENST00000380276 ADAMTS4O75173 837 aa27.55■■■□□ 2
U2AF1-202ENST00000380276 ITGB8P26012 769 aa27.55■■■□□ 2
U2AF1-202ENST00000380276 MSL3Q8N5Y2 521 aaKnown RBP27.55■■■□□ 2
U2AF1-202ENST00000380276 NUP133Q8WUM0 1156 aa27.55■■■□□ 2
U2AF1-202ENST00000380276 CEP95Q96GE4 821 aa27.55■■■□□ 2
U2AF1-202ENST00000380276 CDX2Q99626 313 aaPredicted RBP27.55■■■□□ 2
U2AF1-202ENST00000380276 SYNGAP1Q96PV0 1343 aa27.55■■■□□ 2
U2AF1-202ENST00000380276 ACLYP53396 1101 aa27.54■■■□□ 2
U2AF1-202ENST00000380276 LRRFIP1Q32MZ4 808 aaKnown RBP27.54■■■□□ 2
U2AF1-202ENST00000380276 CHMP4CQ96CF2 233 aa27.54■■■□□ 2
U2AF1-202ENST00000380276 SEMA6BQ9H3T3 888 aa27.54■■■□□ 2
U2AF1-202ENST00000380276 FEM1BQ9UK73 627 aa27.54■■■□□ 2
U2AF1-202ENST00000380276 DCDC2CA8MYV0 355 aa27.53■■■□□ 2
U2AF1-202ENST00000380276 SNAI1O95863 264 aaPredicted RBP27.53■■■□□ 2
U2AF1-202ENST00000380276 TSPY3P0CV98 308 aa27.53■■■□□ 2
U2AF1-202ENST00000380276 TSPY8P0CW00 308 aa27.53■■■□□ 2
U2AF1-202ENST00000380276 SMAD3P84022 425 aaKnown RBP27.53■■■□□ 2
U2AF1-202ENST00000380276 VTI1AQ96AJ9 217 aa27.53■■■□□ 2
U2AF1-202ENST00000380276 TSEN34Q9BSV6 310 aaKnown RBP27.53■■■□□ 2
U2AF1-202ENST00000380276 NACAP1Q9BZK3 213 aa27.53■■■□□ 2
U2AF1-202ENST00000380276 DCTPP1Q9H773 170 aa27.53■■■□□ 2
U2AF1-202ENST00000380276 IGKV6D-41A0A0C4DH26 115 aa27.52■■■□□ 2
U2AF1-202ENST00000380276 KIAA0355O15063 1070 aa27.52■■■□□ 2
U2AF1-202ENST00000380276 TTLL1O95922 423 aa27.52■■■□□ 2
U2AF1-202ENST00000380276 C6orf222P0C671 652 aaPredicted RBP27.52■■■□□ 2
U2AF1-202ENST00000380276 FPGSQ05932 587 aa27.52■■■□□ 2
U2AF1-202ENST00000380276 IKQ13123 557 aaPredicted RBP27.52■■■□□ 2
U2AF1-202ENST00000380276 KCNA10Q16322 511 aa27.52■■■□□ 2
U2AF1-202ENST00000380276 MYLIPQ8WY64 445 aa27.52■■■□□ 2
U2AF1-202ENST00000380276 SPC25Q9HBM1 224 aa27.52■■■□□ 2
U2AF1-202ENST00000380276 HOMER2Q9NSB8 354 aa27.52■■■□□ 2
U2AF1-202ENST00000380276 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.52■■■□□ 2
U2AF1-202ENST00000380276 DNAJC25-GNG10A0A024R161 153 aa27.51■■□□□ 1.99
U2AF1-202ENST00000380276 MOXD2PA6NHM9 499 aa27.51■■□□□ 1.99
U2AF1-202ENST00000380276 PATL2C9JE40 543 aaKnown RBP27.51■■□□□ 1.99
U2AF1-202ENST00000380276 EPHB4P54760 987 aa27.51■■□□□ 1.99
U2AF1-202ENST00000380276 ACVR2BQ13705 512 aa27.51■■□□□ 1.99
U2AF1-202ENST00000380276 SLFN13Q68D06 897 aa27.51■■□□□ 1.99
U2AF1-202ENST00000380276 IFNL3Q8IZI9 196 aa27.51■■□□□ 1.99
U2AF1-202ENST00000380276 SLC38A10Q9HBR0 1119 aa27.51■■□□□ 1.99
U2AF1-202ENST00000380276 MTMR4Q9NYA4 1195 aa27.51■■□□□ 1.99
U2AF1-202ENST00000380276 FBXO40Q9UH90 709 aa27.51■■□□□ 1.99
U2AF1-202ENST00000380276 MYADML2A6NDP7 307 aa27.5■■□□□ 1.99
U2AF1-202ENST00000380276 ATP2A1O14983 1001 aa27.5■■□□□ 1.99
U2AF1-202ENST00000380276 SLC3A2P08195 630 aaKnown RBP27.5■■□□□ 1.99
U2AF1-202ENST00000380276 BMP3P12645 472 aa27.5■■□□□ 1.99
U2AF1-202ENST00000380276 PDE4BQ07343 736 aa27.5■■□□□ 1.99
U2AF1-202ENST00000380276 MAMDC4Q6UXC1 1216 aa27.5■■□□□ 1.99
U2AF1-202ENST00000380276 MAFAQ8NHW3 353 aaPredicted RBP27.5■■□□□ 1.99
U2AF1-202ENST00000380276 GLT1D1Q96MS3 346 aa27.5■■□□□ 1.99
U2AF1-202ENST00000380276 FSD1Q9BTV5 496 aa27.5■■□□□ 1.99
U2AF1-202ENST00000380276 COL25A1Q9BXS0 654 aaPredicted RBP27.5■■□□□ 1.99
U2AF1-202ENST00000380276 DUSP11O75319 330 aaKnown RBP27.49■■□□□ 1.99
U2AF1-202ENST00000380276 FAAP100Q0VG06 881 aa27.49■■□□□ 1.99
U2AF1-202ENST00000380276 ZNF467Q7Z7K2 595 aaPredicted RBP27.49■■□□□ 1.99
U2AF1-202ENST00000380276 KLHDC9Q8NEP7 349 aa27.49■■□□□ 1.99
U2AF1-202ENST00000380276 CHST13Q8NET6 341 aa27.49■■□□□ 1.99
U2AF1-202ENST00000380276 SEC62Q99442 399 aaKnown RBP27.49■■□□□ 1.99
U2AF1-202ENST00000380276 NAPBQ9H115 298 aa27.49■■□□□ 1.99
U2AF1-202ENST00000380276 TTYH1Q9H313 450 aaPredicted RBP27.49■■□□□ 1.99
U2AF1-202ENST00000380276 TMEM232C9JQI7 657 aa27.48■■□□□ 1.99
U2AF1-202ENST00000380276 IRX5P78411 483 aaPredicted RBP27.48■■□□□ 1.99
U2AF1-202ENST00000380276 TFAP4Q01664 338 aa27.48■■□□□ 1.99
U2AF1-202ENST00000380276 GMCL1P1Q8NEA9 526 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms