RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 ZSCAN32Q9NX65 697 aa12.28□□□□□ -0.44
PTCHD1-201ENST00000379361 SERPINB6P35237 376 aa12.28□□□□□ -0.44
PTCHD1-201ENST00000379361 FAM186BQ8IYM0 893 aa12.28□□□□□ -0.44
PTCHD1-201ENST00000379361 LIG4P49917 911 aa12.28□□□□□ -0.44
PTCHD1-201ENST00000379361 PGBD1Q96JS3 809 aa12.28□□□□□ -0.44
PTCHD1-201ENST00000379361 LRRC37BQ96QE4 947 aa12.28□□□□□ -0.44
PTCHD1-201ENST00000379361 MYH15Q9Y2K3 1946 aa12.28□□□□□ -0.44
PTCHD1-201ENST00000379361 TTI1O43156 1089 aa12.28□□□□□ -0.44
PTCHD1-201ENST00000379361 THAP12O43422 761 aa12.28□□□□□ -0.44
PTCHD1-201ENST00000379361 RNF40O75150 1001 aa12.28□□□□□ -0.44
PTCHD1-201ENST00000379361 TRIM60Q495X7 471 aa12.28□□□□□ -0.44
PTCHD1-201ENST00000379361 HERC4Q5GLZ8 1057 aaPredicted RBP12.28□□□□□ -0.44
PTCHD1-201ENST00000379361 TRIM45Q9H8W5 580 aaPredicted RBP12.28□□□□□ -0.44
PTCHD1-201ENST00000379361 ZNF174Q15697 407 aa12.28□□□□□ -0.44
PTCHD1-201ENST00000379361 EDEM3Q9BZQ6 932 aa12.28□□□□□ -0.44
PTCHD1-201ENST00000379361 IL16Q14005 1332 aa12.28□□□□□ -0.44
PTCHD1-201ENST00000379361 SART1O43290 800 aaKnown RBP12.28□□□□□ -0.44
PTCHD1-201ENST00000379361 ESRRGP62508 458 aa12.28□□□□□ -0.44
PTCHD1-201ENST00000379361 LRRC59Q96AG4 307 aaKnown RBP12.28□□□□□ -0.44
PTCHD1-201ENST00000379361 MAP3K7CLP57077 242 aa12.28□□□□□ -0.44
PTCHD1-201ENST00000379361 TEX14Q8IWB6 1497 aa12.27□□□□□ -0.44
PTCHD1-201ENST00000379361 KIFC3Q9BVG8 833 aa12.27□□□□□ -0.44
PTCHD1-201ENST00000379361 SLITRK6Q9H5Y7 841 aa12.27□□□□□ -0.44
PTCHD1-201ENST00000379361 SLC4A1P02730 911 aa12.27□□□□□ -0.44
PTCHD1-201ENST00000379361 ATXN8OSP0DMR3 200 aa12.27□□□□□ -0.44
PTCHD1-201ENST00000379361 ATP2B4P23634 1241 aa12.27□□□□□ -0.44
PTCHD1-201ENST00000379361 ALDH1B1P30837 517 aa12.27□□□□□ -0.44
PTCHD1-201ENST00000379361 PDE6CP51160 858 aa12.27□□□□□ -0.44
PTCHD1-201ENST00000379361 KSR2Q6VAB6 950 aa12.27□□□□□ -0.44
PTCHD1-201ENST00000379361 BBOF1Q8ND07 529 aa12.27□□□□□ -0.44
PTCHD1-201ENST00000379361 SLC7A5P2Q9GIP4 190 aa12.27□□□□□ -0.44
PTCHD1-201ENST00000379361 KDM5AP29375 1690 aaKnown RBP12.27□□□□□ -0.44
PTCHD1-201ENST00000379361 RETREG2Q8NC44 543 aa12.27□□□□□ -0.44
PTCHD1-201ENST00000379361 A0A1B0GVL5 298 aa12.27□□□□□ -0.44
PTCHD1-201ENST00000379361 STX2P32856 288 aa12.27□□□□□ -0.44
PTCHD1-201ENST00000379361 AKAP4Q5JQC9 854 aa12.27□□□□□ -0.44
PTCHD1-201ENST00000379361 ARMC9Q7Z3E5 817 aa12.27□□□□□ -0.44
PTCHD1-201ENST00000379361 AP5M1Q9H0R1 490 aa12.27□□□□□ -0.44
PTCHD1-201ENST00000379361 TBC1D7Q9P0N9 293 aa12.27□□□□□ -0.44
PTCHD1-201ENST00000379361 TESPA1A2RU30 521 aaPredicted RBP12.27□□□□□ -0.45
PTCHD1-201ENST00000379361 NPR1P16066 1061 aa12.27□□□□□ -0.45
PTCHD1-201ENST00000379361 GADL1Q6ZQY3 521 aa12.27□□□□□ -0.45
PTCHD1-201ENST00000379361 SAT1P21673 171 aa12.27□□□□□ -0.45
PTCHD1-201ENST00000379361 ABCD1P33897 745 aa12.27□□□□□ -0.45
PTCHD1-201ENST00000379361 C16orf72Q14CZ0 275 aa12.27□□□□□ -0.45
PTCHD1-201ENST00000379361 RHPN1Q8TCX5 695 aa12.27□□□□□ -0.45
PTCHD1-201ENST00000379361 CHRNA2Q15822 529 aa12.27□□□□□ -0.45
PTCHD1-201ENST00000379361 PARP10Q53GL7 1025 aa12.27□□□□□ -0.45
PTCHD1-201ENST00000379361 CHST3Q7LGC8 479 aa12.27□□□□□ -0.45
PTCHD1-201ENST00000379361 DDX21Q9NR30 783 aaKnown RBP eCLIP12.27□□□□□ -0.45
PTCHD1-201ENST00000379361 ANGPTL8Q6UXH0 198 aa12.27□□□□□ -0.45
PTCHD1-201ENST00000379361 ANGEL1Q9UNK9 670 aaKnown RBP12.27□□□□□ -0.45
PTCHD1-201ENST00000379361 CREB3L3Q68CJ9 461 aa12.27□□□□□ -0.45
PTCHD1-201ENST00000379361 AMFRQ9UKV5 643 aa12.27□□□□□ -0.45
PTCHD1-201ENST00000379361 SVILO95425 2214 aa12.27□□□□□ -0.45
PTCHD1-201ENST00000379361 LMNB2Q03252 620 aa12.27□□□□□ -0.45
PTCHD1-201ENST00000379361 DLGAP5Q15398 846 aa12.27□□□□□ -0.45
PTCHD1-201ENST00000379361 GDAP1L1Q96MZ0 367 aa12.27□□□□□ -0.45
PTCHD1-201ENST00000379361 TLR3O15455 904 aaKnown RBP12.26□□□□□ -0.45
PTCHD1-201ENST00000379361 CUTAO60888 179 aa12.26□□□□□ -0.45
PTCHD1-201ENST00000379361 CCDC186Q7Z3E2 898 aa12.26□□□□□ -0.45
PTCHD1-201ENST00000379361 GPC4O75487 556 aa12.26□□□□□ -0.45
PTCHD1-201ENST00000379361 DNM1Q05193 864 aaKnown RBP12.26□□□□□ -0.45
PTCHD1-201ENST00000379361 SCYL2Q6P3W7 929 aa12.26□□□□□ -0.45
PTCHD1-201ENST00000379361 CACTINQ8WUQ7 758 aaKnown RBP12.26□□□□□ -0.45
PTCHD1-201ENST00000379361 TRAIPQ9BWF2 469 aa12.26□□□□□ -0.45
PTCHD1-201ENST00000379361 GIMAP4Q9NUV9 329 aa12.26□□□□□ -0.45
PTCHD1-201ENST00000379361 SDSP20132 328 aa12.26□□□□□ -0.45
PTCHD1-201ENST00000379361 IFIH1Q9BYX4 1025 aaKnown RBP12.26□□□□□ -0.45
PTCHD1-201ENST00000379361 MYO1AQ9UBC5 1043 aa12.26□□□□□ -0.45
PTCHD1-201ENST00000379361 LUC7L3O95232 432 aaKnown RBP12.26□□□□□ -0.45
PTCHD1-201ENST00000379361 STAT1P42224 750 aa12.26□□□□□ -0.45
PTCHD1-201ENST00000379361 EVCP57679 992 aa12.26□□□□□ -0.45
PTCHD1-201ENST00000379361 TBC1D2Q9BYX2 928 aa12.26□□□□□ -0.45
PTCHD1-201ENST00000379361 WDR97A6NE52 1622 aa12.26□□□□□ -0.45
PTCHD1-201ENST00000379361 TRIM31Q9BZY9 425 aa12.26□□□□□ -0.45
PTCHD1-201ENST00000379361 TRIM15Q9C019 465 aa12.26□□□□□ -0.45
PTCHD1-201ENST00000379361 SMYD2Q9NRG4 433 aa12.26□□□□□ -0.45
PTCHD1-201ENST00000379361 ESPL1Q14674 2120 aa12.26□□□□□ -0.45
PTCHD1-201ENST00000379361 IFNB1P01574 187 aa12.26□□□□□ -0.45
PTCHD1-201ENST00000379361 DDX5P17844 614 aaKnown RBP12.26□□□□□ -0.45
PTCHD1-201ENST00000379361 SZRD1Q7Z422 152 aa12.26□□□□□ -0.45
PTCHD1-201ENST00000379361 MYH3P11055 1940 aa12.26□□□□□ -0.45
PTCHD1-201ENST00000379361 TMEM191BP0C7N4 346 aa12.26□□□□□ -0.45
PTCHD1-201ENST00000379361 ZYXQ15942 572 aaKnown RBP12.26□□□□□ -0.45
PTCHD1-201ENST00000379361 FASTKD5Q7L8L6 764 aaKnown RBP12.26□□□□□ -0.45
PTCHD1-201ENST00000379361 TTC30AQ86WT1 665 aa12.26□□□□□ -0.45
PTCHD1-201ENST00000379361 DACT1Q9NYF0 836 aa12.26□□□□□ -0.45
PTCHD1-201ENST00000379361 DRP2Q13474 957 aa12.26□□□□□ -0.45
PTCHD1-201ENST00000379361 SLC12A1Q13621 1099 aa12.26□□□□□ -0.45
PTCHD1-201ENST00000379361 DPP9Q86TI2 863 aa12.26□□□□□ -0.45
PTCHD1-201ENST00000379361 MGARPQ8TDB4 240 aa12.26□□□□□ -0.45
PTCHD1-201ENST00000379361 MAD1L1Q9Y6D9 718 aa12.26□□□□□ -0.45
PTCHD1-201ENST00000379361 CEP104O60308 925 aa12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 MAGI1Q96QZ7 1491 aaPredicted RBP12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 JPH2Q9BR39 696 aaPredicted RBP12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 LLPHQ9BRT6 129 aaKnown RBP12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 MBD4O95243 580 aa12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 BAG2O95816 211 aa12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 SESTD1Q86VW0 696 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms