RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 SHANK2Q9UPX8 1470 aa12.06□□□□□ -0.48
LINC00654-201ENST00000379053 ZBTB7AO95365 584 aa12.06□□□□□ -0.48
LINC00654-201ENST00000379053 DLATP10515 647 aaKnown RBP12.06□□□□□ -0.48
LINC00654-201ENST00000379053 FAM173BQ6P4H8 233 aa12.06□□□□□ -0.48
LINC00654-201ENST00000379053 SYT10Q6XYQ8 523 aa12.06□□□□□ -0.48
LINC00654-201ENST00000379053 NEK8Q86SG6 692 aa12.06□□□□□ -0.48
LINC00654-201ENST00000379053 GPKOWQ92917 476 aaPredicted RBP eCLIP12.06□□□□□ -0.48
LINC00654-201ENST00000379053 TRIM31Q9BZY9 425 aa12.06□□□□□ -0.48
LINC00654-201ENST00000379053 SWAP70Q9UH65 585 aa12.06□□□□□ -0.48
LINC00654-201ENST00000379053 FAM170AA1A519 330 aa12.06□□□□□ -0.48
LINC00654-201ENST00000379053 ZSCAN20P17040 1043 aaPredicted RBP12.06□□□□□ -0.48
LINC00654-201ENST00000379053 R3HDM1Q15032 1099 aaKnown RBP12.06□□□□□ -0.48
LINC00654-201ENST00000379053 POSTNQ15063 836 aa12.06□□□□□ -0.48
LINC00654-201ENST00000379053 CFAP57Q96MR6 1250 aa12.06□□□□□ -0.48
LINC00654-201ENST00000379053 ZNF277Q9NRM2 450 aaPredicted RBP12.06□□□□□ -0.48
LINC00654-201ENST00000379053 UTP11Q9Y3A2 253 aaKnown RBP12.06□□□□□ -0.48
LINC00654-201ENST00000379053 ESYT2A0FGR8 921 aa12.06□□□□□ -0.48
LINC00654-201ENST00000379053 IVLP07476 585 aa12.06□□□□□ -0.48
LINC00654-201ENST00000379053 MMP10P09238 476 aa12.06□□□□□ -0.48
LINC00654-201ENST00000379053 XRCC5P13010 732 aaKnown RBP12.06□□□□□ -0.48
LINC00654-201ENST00000379053 XPAP23025 273 aaPredicted RBP12.06□□□□□ -0.48
LINC00654-201ENST00000379053 MAN1A1P33908 653 aa12.06□□□□□ -0.48
LINC00654-201ENST00000379053 SFMBT2Q5VUG0 894 aa12.06□□□□□ -0.48
LINC00654-201ENST00000379053 NBPF11Q86T75 865 aa12.06□□□□□ -0.48
LINC00654-201ENST00000379053 SEPT9Q9UHD8 586 aaPredicted RBP12.06□□□□□ -0.48
LINC00654-201ENST00000379053 TYW5A2RUC4 315 aaKnown RBP12.05□□□□□ -0.48
LINC00654-201ENST00000379053 GOLGA6CA6NDK9 693 aa12.05□□□□□ -0.48
LINC00654-201ENST00000379053 GOLGA6BA6NDN3 693 aa12.05□□□□□ -0.48
LINC00654-201ENST00000379053 ZNF202O95125 648 aa12.05□□□□□ -0.48
LINC00654-201ENST00000379053 FOSP01100 380 aaPredicted RBP12.05□□□□□ -0.48
LINC00654-201ENST00000379053 GOLGA6DP0CG33 693 aa12.05□□□□□ -0.48
LINC00654-201ENST00000379053 GOLGA5Q8TBA6 731 aa12.05□□□□□ -0.48
LINC00654-201ENST00000379053 GOLGA6AQ9NYA3 693 aa12.05□□□□□ -0.48
LINC00654-201ENST00000379053 SAMD15Q9P1V8 674 aa12.05□□□□□ -0.48
LINC00654-201ENST00000379053 PDE8BO95263 885 aa12.05□□□□□ -0.48
LINC00654-201ENST00000379053 MAGEA1P43355 309 aa12.05□□□□□ -0.48
LINC00654-201ENST00000379053 CCDC84Q86UT8 332 aaPredicted RBP12.05□□□□□ -0.48
LINC00654-201ENST00000379053 FANCBQ8NB91 859 aa12.05□□□□□ -0.48
LINC00654-201ENST00000379053 ZBTB9Q96C00 473 aa12.05□□□□□ -0.48
LINC00654-201ENST00000379053 JPH2Q9BR39 696 aaPredicted RBP12.05□□□□□ -0.48
LINC00654-201ENST00000379053 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.05□□□□□ -0.48
LINC00654-201ENST00000379053 V9GYY5 206 aaPredicted RBP12.05□□□□□ -0.48
LINC00654-201ENST00000379053 ADAMTS12P58397 1594 aa12.05□□□□□ -0.48
LINC00654-201ENST00000379053 BIVM-ERCC5R4GMW8 1640 aa12.05□□□□□ -0.48
LINC00654-201ENST00000379053 GNA14O95837 355 aa12.05□□□□□ -0.48
LINC00654-201ENST00000379053 PHKA1P46020 1223 aa12.05□□□□□ -0.48
LINC00654-201ENST00000379053 COA7Q96BR5 231 aa12.05□□□□□ -0.48
LINC00654-201ENST00000379053 CEP104O60308 925 aa12.05□□□□□ -0.48
LINC00654-201ENST00000379053 XRCC6P12956 609 aaKnown RBP eCLIP12.05□□□□□ -0.48
LINC00654-201ENST00000379053 MYOCDQ8IZQ8 938 aa12.05□□□□□ -0.48
LINC00654-201ENST00000379053 ATP6V0A1Q93050 837 aa12.05□□□□□ -0.48
LINC00654-201ENST00000379053 STAM2O75886 525 aa12.05□□□□□ -0.48
LINC00654-201ENST00000379053 C8orf74Q6P047 294 aa12.05□□□□□ -0.48
LINC00654-201ENST00000379053 ARMCX5Q6P1M9 558 aa12.05□□□□□ -0.48
LINC00654-201ENST00000379053 SECISBP2LQ93073 1101 aaKnown RBP12.05□□□□□ -0.48
LINC00654-201ENST00000379053 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.05□□□□□ -0.48
LINC00654-201ENST00000379053 LGSNQ5TDP6 509 aa12.04□□□□□ -0.48
LINC00654-201ENST00000379053 RSRC2Q7L4I2 434 aaKnown RBP12.04□□□□□ -0.48
LINC00654-201ENST00000379053 CCDC127Q96BQ5 260 aa12.04□□□□□ -0.48
LINC00654-201ENST00000379053 TACC3Q9Y6A5 838 aa12.04□□□□□ -0.48
LINC00654-201ENST00000379053 CYP4A11Q02928 519 aa12.04□□□□□ -0.48
LINC00654-201ENST00000379053 PDZD4Q76G19 769 aaPredicted RBP12.04□□□□□ -0.48
LINC00654-201ENST00000379053 MICAL1Q8TDZ2 1067 aa12.04□□□□□ -0.48
LINC00654-201ENST00000379053 SLC7A3Q8WY07 619 aa12.04□□□□□ -0.48
LINC00654-201ENST00000379053 MIS12Q9H081 205 aa12.04□□□□□ -0.48
LINC00654-201ENST00000379053 NLRC4Q9NPP4 1024 aa12.04□□□□□ -0.48
LINC00654-201ENST00000379053 FAM207AQ9NSI2 230 aaPredicted RBP12.04□□□□□ -0.48
LINC00654-201ENST00000379053 WDR17Q8IZU2 1322 aa12.04□□□□□ -0.48
LINC00654-201ENST00000379053 SYNJ2BP-COX16A0A087WUM0 186 aa12.04□□□□□ -0.48
LINC00654-201ENST00000379053 INO80B-WBP1J3KQ70 363 aa12.04□□□□□ -0.48
LINC00654-201ENST00000379053 SCG2P13521 617 aa12.04□□□□□ -0.48
LINC00654-201ENST00000379053 NPR1P16066 1061 aa12.04□□□□□ -0.48
LINC00654-201ENST00000379053 INO80BQ9C086 356 aaPredicted RBP12.04□□□□□ -0.48
LINC00654-201ENST00000379053 COX16Q9P0S2 106 aa12.04□□□□□ -0.48
LINC00654-201ENST00000379053 OR52Z1P0C646 297 aa12.04□□□□□ -0.48
LINC00654-201ENST00000379053 ERCC6LQ2NKX8 1250 aa12.04□□□□□ -0.48
LINC00654-201ENST00000379053 EEPD1Q7L9B9 569 aa12.04□□□□□ -0.48
LINC00654-201ENST00000379053 METTL23Q86XA0 190 aa12.04□□□□□ -0.48
LINC00654-201ENST00000379053 CCDC105Q8IYK2 499 aa12.04□□□□□ -0.48
LINC00654-201ENST00000379053 SYCE1Q8N0S2 351 aa12.04□□□□□ -0.48
LINC00654-201ENST00000379053 NFE2L3Q9Y4A8 694 aa12.04□□□□□ -0.48
LINC00654-201ENST00000379053 JAK2O60674 1132 aa12.04□□□□□ -0.48
LINC00654-201ENST00000379053 ARPP19P56211 112 aa12.04□□□□□ -0.48
LINC00654-201ENST00000379053 LACTBP83111 547 aaPredicted RBP12.04□□□□□ -0.48
LINC00654-201ENST00000379053 PPP2R5AQ15172 486 aa12.04□□□□□ -0.48
LINC00654-201ENST00000379053 MUM1L1Q5H9M0 696 aa12.04□□□□□ -0.48
LINC00654-201ENST00000379053 GPATCH4Q5T3I0 446 aaKnown RBP12.04□□□□□ -0.48
LINC00654-201ENST00000379053 CCDC121Q6ZUS5 278 aa12.04□□□□□ -0.48
LINC00654-201ENST00000379053 MIGA2Q7L4E1 593 aa12.04□□□□□ -0.48
LINC00654-201ENST00000379053 DAAM2Q86T65 1068 aa12.04□□□□□ -0.48
LINC00654-201ENST00000379053 EXOC8Q8IYI6 725 aa12.04□□□□□ -0.48
LINC00654-201ENST00000379053 COL4A3BPQ9Y5P4 624 aa12.04□□□□□ -0.48
LINC00654-201ENST00000379053 CCDC160A6NGH7 325 aa12.03□□□□□ -0.48
LINC00654-201ENST00000379053 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.03□□□□□ -0.48
LINC00654-201ENST00000379053 INSRP06213 1382 aa12.03□□□□□ -0.48
LINC00654-201ENST00000379053 DDAH1O94760 285 aa12.03□□□□□ -0.48
LINC00654-201ENST00000379053 C21orf2O43822 256 aa12.03□□□□□ -0.48
LINC00654-201ENST00000379053 STAT1P42224 750 aa12.03□□□□□ -0.48
LINC00654-201ENST00000379053 FANCCQ00597 558 aa12.03□□□□□ -0.48
LINC00654-201ENST00000379053 NAPGQ99747 312 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms