RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 IRX5P78411 483 aaPredicted RBP21.34■■□□□ 1.01
PDLIM4-202ENST00000379018 KCNA10Q16322 511 aa21.34■■□□□ 1.01
PDLIM4-202ENST00000379018 NUP133Q8WUM0 1156 aa21.34■■□□□ 1.01
PDLIM4-202ENST00000379018 PPM1EQ8WY54 764 aa21.34■■□□□ 1.01
PDLIM4-202ENST00000379018 FAM184BQ9ULE4 1060 aa21.34■■□□□ 1.01
PDLIM4-202ENST00000379018 MCM3APO60318 1980 aa21.34■■□□□ 1.01
PDLIM4-202ENST00000379018 USP38Q8NB14 1042 aa21.33■■□□□ 1.01
PDLIM4-202ENST00000379018 HAUS7Q99871 368 aa21.33■■□□□ 1.01
PDLIM4-202ENST00000379018 TEX13BQ9BXU2 312 aa21.33■■□□□ 1.01
PDLIM4-202ENST00000379018 PUS7LQ9H0K6 701 aaKnown RBP21.33■■□□□ 1.01
PDLIM4-202ENST00000379018 COG6Q9Y2V7 657 aa21.33■■□□□ 1.01
PDLIM4-202ENST00000379018 RIPK3Q9Y572 518 aa21.33■■□□□ 1.01
PDLIM4-202ENST00000379018 MYO9BQ13459 2157 aa21.33■■□□□ 1
PDLIM4-202ENST00000379018 TMEM265A0A087WTH1 108 aa21.32■■□□□ 1
PDLIM4-202ENST00000379018 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.32■■□□□ 1
PDLIM4-202ENST00000379018 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.32■■□□□ 1
PDLIM4-202ENST00000379018 RAB11FIP3O75154 756 aa21.32■■□□□ 1
PDLIM4-202ENST00000379018 SNAI1O95863 264 aaPredicted RBP21.32■■□□□ 1
PDLIM4-202ENST00000379018 C6orf222P0C671 652 aaPredicted RBP21.32■■□□□ 1
PDLIM4-202ENST00000379018 ATP5JP18859 108 aa21.32■■□□□ 1
PDLIM4-202ENST00000379018 UBE3CQ15386 1083 aa21.32■■□□□ 1
PDLIM4-202ENST00000379018 CCDC129Q6ZRS4 1044 aa21.32■■□□□ 1
PDLIM4-202ENST00000379018 SIRT2Q8IXJ6 389 aa21.32■■□□□ 1
PDLIM4-202ENST00000379018 RPAP2Q8IXW5 612 aaPredicted RBP21.32■■□□□ 1
PDLIM4-202ENST00000379018 TSEN34Q9BSV6 310 aaKnown RBP21.32■■□□□ 1
PDLIM4-202ENST00000379018 MINDY4BA8MYZ0 360 aa21.31■■□□□ 1
PDLIM4-202ENST00000379018 ANKRD33Q7Z3H0 272 aa21.31■■□□□ 1
PDLIM4-202ENST00000379018 KIFC2Q96AC6 838 aa21.31■■□□□ 1
PDLIM4-202ENST00000379018 TIFAQ96CG3 184 aa21.31■■□□□ 1
PDLIM4-202ENST00000379018 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.31■■□□□ 1
PDLIM4-202ENST00000379018 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.31■■□□□ 1
PDLIM4-202ENST00000379018 PPP1R12CQ9BZL4 782 aa21.31■■□□□ 1
PDLIM4-202ENST00000379018 ZNF576Q9H609 170 aa21.31■■□□□ 1
PDLIM4-202ENST00000379018 MKNK2Q9HBH9 465 aa21.31■■□□□ 1
PDLIM4-202ENST00000379018 RAVER2Q9HCJ3 691 aaKnown RBP21.31■■□□□ 1
PDLIM4-202ENST00000379018 ARPP21Q9UBL0 812 aaPredicted RBP21.31■■□□□ 1
PDLIM4-202ENST00000379018 ISY1Q9ULR0 285 aaKnown RBP21.31■■□□□ 1
PDLIM4-202ENST00000379018 ZBED9Q6R2W3 1325 aa21.3■■□□□ 1
PDLIM4-202ENST00000379018 SYNGAP1Q96PV0 1343 aa21.3■■□□□ 1
PDLIM4-202ENST00000379018 MYH4Q9Y623 1939 aa21.3■■□□□ 1
PDLIM4-202ENST00000379018 MOXD2PA6NHM9 499 aa21.3■■□□□ 1
PDLIM4-202ENST00000379018 GRXCR1A8MXD5 290 aa21.3■■□□□ 1
PDLIM4-202ENST00000379018 NDUFB10O96000 172 aa21.3■■□□□ 1
PDLIM4-202ENST00000379018 TIMP1P01033 207 aa21.3■■□□□ 1
PDLIM4-202ENST00000379018 SYMPKQ92797 1274 aaKnown RBP21.3■■□□□ 1
PDLIM4-202ENST00000379018 GLT1D1Q96MS3 346 aa21.3■■□□□ 1
PDLIM4-202ENST00000379018 TOX2Q96NM4 488 aa21.3■■□□□ 1
PDLIM4-202ENST00000379018 PRDM6Q9NQX0 595 aa21.3■■□□□ 1
PDLIM4-202ENST00000379018 TTC28Q96AY4 2481 aa21.29■■□□□ 1
PDLIM4-202ENST00000379018 F5H6K3 240 aa21.29■■□□□ 1
PDLIM4-202ENST00000379018 ACRP10323 421 aa21.29■■□□□ 1
PDLIM4-202ENST00000379018 RASA1P20936 1047 aa21.29■■□□□ 1
PDLIM4-202ENST00000379018 PBX2P40425 430 aa21.29■■□□□ 1
PDLIM4-202ENST00000379018 KLRC3Q07444 240 aa21.29■■□□□ 1
PDLIM4-202ENST00000379018 ZSCAN25Q6NSZ9 544 aa21.29■■□□□ 1
PDLIM4-202ENST00000379018 KLHDC9Q8NEP7 349 aa21.29■■□□□ 1
PDLIM4-202ENST00000379018 HOMER2Q9NSB8 354 aa21.29■■□□□ 1
PDLIM4-202ENST00000379018 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.29■■□□□ 1
PDLIM4-202ENST00000379018 GREB1LQ9C091 1923 aaPredicted RBP21.29■■□□□ 1
PDLIM4-202ENST00000379018 ADCY6O43306 1168 aa21.28■■□□□ 1
PDLIM4-202ENST00000379018 SMARCA5O60264 1052 aaPredicted RBP21.28■■□□□ 1
PDLIM4-202ENST00000379018 ZBED4O75132 1171 aa21.28■■□□□ 1
PDLIM4-202ENST00000379018 DUSP11O75319 330 aaKnown RBP21.28■■□□□ 1
PDLIM4-202ENST00000379018 ASGR1P07306 291 aa21.28■■□□□ 1
PDLIM4-202ENST00000379018 PPIGQ13427 754 aaKnown RBP eCLIP21.28■■□□□ 1
PDLIM4-202ENST00000379018 ACVR2BQ13705 512 aa21.28■■□□□ 1
PDLIM4-202ENST00000379018 ANKRD35Q8N283 1001 aa21.28■■□□□ 1
PDLIM4-202ENST00000379018 MSL3Q8N5Y2 521 aaKnown RBP21.28■■□□□ 1
PDLIM4-202ENST00000379018 CHMP4CQ96CF2 233 aa21.28■■□□□ 1
PDLIM4-202ENST00000379018 SPC25Q9HBM1 224 aa21.28■■□□□ 1
PDLIM4-202ENST00000379018 CLIP2Q9UDT6 1046 aa21.28■■□□□ 1
PDLIM4-202ENST00000379018 TBX21Q9UL17 535 aa21.28■■□□□ 1
PDLIM4-202ENST00000379018 DDX19BQ9UMR2 479 aa21.28■■□□□ 1
PDLIM4-202ENST00000379018 SPTBN5Q9NRC6 3674 aaKnown RBP21.27■■□□□ 1
PDLIM4-202ENST00000379018 MS4A1P11836 297 aa21.27■■□□□ 1
PDLIM4-202ENST00000379018 CSF2RAP15509 400 aa21.27■■□□□ 1
PDLIM4-202ENST00000379018 CCDC144BQ3MJ40 725 aa21.27■■□□□ 1
PDLIM4-202ENST00000379018 MFSD5Q6N075 450 aa21.27■■□□□ 1
PDLIM4-202ENST00000379018 NOL8Q76FK4 1167 aaKnown RBP21.27■■□□□ 1
PDLIM4-202ENST00000379018 LRRC47Q8N1G4 583 aaKnown RBP21.27■■□□□ 1
PDLIM4-202ENST00000379018 PRPF38AQ8NAV1 312 aaKnown RBP21.27■■□□□ 1
PDLIM4-202ENST00000379018 GAS2L1Q99501 681 aaPredicted RBP21.27■■□□□ 1
PDLIM4-202ENST00000379018 MROH7Q68CQ1 1323 aa21.27■□□□□ 0.99
PDLIM4-202ENST00000379018 DNAJC25-GNG10A0A024R161 153 aa21.26■□□□□ 0.99
PDLIM4-202ENST00000379018 A0A0U1RQG5 324 aaPredicted RBP21.26■□□□□ 0.99
PDLIM4-202ENST00000379018 PRDM1O75626 825 aa21.26■□□□□ 0.99
PDLIM4-202ENST00000379018 TJAP1Q5JTD0 557 aa21.26■□□□□ 0.99
PDLIM4-202ENST00000379018 GNASQ5JWF2 1037 aa21.26■□□□□ 0.99
PDLIM4-202ENST00000379018 CCSAPQ6IQ19 270 aaPredicted RBP21.26■□□□□ 0.99
PDLIM4-202ENST00000379018 MAMDC4Q6UXC1 1216 aa21.26■□□□□ 0.99
PDLIM4-202ENST00000379018 ARMCX2Q7L311 632 aa21.26■□□□□ 0.99
PDLIM4-202ENST00000379018 PCSK9Q8NBP7 692 aaKnown RBP21.26■□□□□ 0.99
PDLIM4-202ENST00000379018 PBX4Q9BYU1 374 aa21.26■□□□□ 0.99
PDLIM4-202ENST00000379018 PRDM12Q9H4Q4 367 aa21.26■□□□□ 0.99
PDLIM4-202ENST00000379018 ZBTB40Q9NUA8 1239 aa21.26■□□□□ 0.99
PDLIM4-202ENST00000379018 NYAP2Q9P242 653 aa21.26■□□□□ 0.99
PDLIM4-202ENST00000379018 BEX3Q00994 111 aa21.25■□□□□ 0.99
PDLIM4-202ENST00000379018 TMEM240Q5SV17 173 aa21.25■□□□□ 0.99
PDLIM4-202ENST00000379018 CCDC174Q6PII3 467 aa21.25■□□□□ 0.99
PDLIM4-202ENST00000379018 STRBPQ96SI9 672 aaKnown RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms