RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 PAK2Q13177 524 aa7.53□□□□□ -1.2
CDKAL1-202ENST00000378610 SPATS2Q86XZ4 545 aaKnown RBP7.53□□□□□ -1.2
CDKAL1-202ENST00000378610 TTC13Q8NBP0 860 aa7.53□□□□□ -1.2
CDKAL1-202ENST00000378610 SVIPQ8NHG7 77 aa7.53□□□□□ -1.2
CDKAL1-202ENST00000378610 KCNG4Q8TDN1 519 aa7.53□□□□□ -1.2
CDKAL1-202ENST00000378610 DNAAF4Q8WXU2 420 aa7.53□□□□□ -1.2
CDKAL1-202ENST00000378610 PPCSQ9HAB8 311 aa7.53□□□□□ -1.2
CDKAL1-202ENST00000378610 ZRANB1Q9UGI0 708 aa7.53□□□□□ -1.2
CDKAL1-202ENST00000378610 FAM169AQ9Y6X4 670 aa7.53□□□□□ -1.2
CDKAL1-202ENST00000378610 MROH7-TTC4A0A0A0MT08 1334 aa7.53□□□□□ -1.2
CDKAL1-202ENST00000378610 IGSF1Q8N6C5 1336 aa7.53□□□□□ -1.2
CDKAL1-202ENST00000378610 TMEM94Q12767 1356 aa7.52□□□□□ -1.2
CDKAL1-202ENST00000378610 KLHL33A6NCF5 533 aa7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 RASSF9O75901 435 aa7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 CDC27P30260 824 aa7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 IRAK1P51617 712 aa7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 MTMR2Q13614 643 aa7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 MAPRE1Q15691 268 aaKnown RBP7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 SULT6B1Q6IMI4 303 aa7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 TLDC1Q6P9B6 456 aa7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 TMEM92Q6UXU6 159 aa7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 RUBCNQ92622 972 aa7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 SYMPKQ92797 1274 aaKnown RBP7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 ZKSCAN4Q969J2 545 aaPredicted RBP7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 DEPDC7Q96QD5 511 aa7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 CAMTA1Q9Y6Y1 1673 aa7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 ZNF609O15014 1411 aa7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 SRRM3A6NNA2 597 aaPredicted RBP7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 FDPSP14324 419 aaKnown RBP7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 NR1I3Q14994 352 aa7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 KIF4BQ2VIQ3 1234 aa7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 GBP6Q6ZN66 633 aa7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 SULF1Q8IWU6 871 aa7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.52□□□□□ -1.213e-6■□□□□ 9.8
CDKAL1-202ENST00000378610 PLPP7Q8NBV4 271 aa7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 DNAAF2Q9NVR5 837 aaKnown RBP7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 CTDP1Q9Y5B0 961 aaPredicted RBP7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 GPR182O15218 404 aa7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 EIF3HO15372 352 aaKnown RBP eCLIP7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 ZNF202O95125 648 aa7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 BMP6P22004 513 aa7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 MTHFSDQ2M296 383 aaKnown RBP7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 TKFCQ3LXA3 575 aa7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 SPECC1LQ69YQ0 1117 aa7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 UBE3BQ7Z3V4 1068 aa7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 C14orf80Q86SX3 495 aa7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 ZNF589Q86UQ0 364 aaPredicted RBP7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 IGSF22Q8N9C0 903 aa7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 COG1Q8WTW3 980 aa7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 ERCC4Q92889 916 aaPredicted RBP7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 STK31Q9BXU1 1019 aa7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 TSPYL4Q9UJ04 414 aa7.52□□□□□ -1.21
CDKAL1-202ENST00000378610 MAP3K19Q56UN5 1328 aa7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 SLC3A2P08195 630 aaKnown RBP7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 TOP1P11387 765 aaKnown RBP7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 MZF1P28698 734 aaPredicted RBP7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 PLCB3Q01970 1234 aa7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 RAPGEF1Q13905 1077 aa7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 KCTD2Q14681 263 aa7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 RRS1Q15050 365 aaKnown RBP7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 CPLX2Q6PUV4 134 aaKnown RBP7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 ZNF572Q7Z3I7 529 aaPredicted RBP7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 LILRB2Q8N423 598 aa7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 APPBP2Q92624 585 aa7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 ZNF274Q96GC6 653 aaPredicted RBP7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 CRELD1Q96HD1 420 aa7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 COG3Q96JB2 828 aa7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 NEK1Q96PY6 1258 aa7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 AS3MTQ9HBK9 375 aa7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 PTPRHQ9HD43 1115 aa7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 WDR17Q8IZU2 1322 aa7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 A0A1B0GTH6 734 aa7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 A0A1B0GVL5 298 aa7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 A6NNZ2 444 aa7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 TIMM44O43615 452 aa7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 MYL1P05976 194 aa7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 HOXB7P09629 217 aa7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 NBPF7P0C2Y1 421 aaPredicted RBP7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 GCFC2P16383 781 aaKnown RBP7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 ELF1P32519 619 aa7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 SARSP49591 514 aaKnown RBP7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 PIP4K2BP78356 416 aa7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 GRIK3Q13003 919 aa7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 SIM2Q14190 667 aaPredicted RBP7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 NEDD9Q14511 834 aa7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 CRYMQ14894 314 aa7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 TUBB8Q3ZCM7 444 aa7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 FBXW10Q5XX13 1052 aa7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 WWC2Q6AWC2 1192 aa7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 Q6ZUG5 572 aa7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 TTC30BQ8N4P2 665 aa7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 CABS1Q96KC9 395 aa7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 TEX13AQ9BXU3 409 aaPredicted RBP7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 KAT14Q9H8E8 782 aa7.51□□□□□ -1.21
CDKAL1-202ENST00000378610 PTPDC1A2A3K4 754 aa7.5□□□□□ -1.21
CDKAL1-202ENST00000378610 TBX3O15119 743 aa7.5□□□□□ -1.21
CDKAL1-202ENST00000378610 CCDC175P0C221 793 aa7.5□□□□□ -1.21
CDKAL1-202ENST00000378610 ARHGAP25P42331 645 aa7.5□□□□□ -1.21
CDKAL1-202ENST00000378610 USP14P54578 494 aa7.5□□□□□ -1.21
CDKAL1-202ENST00000378610 SEC13P55735 322 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms