RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 FAXDC2Q96IV6 333 aa11.7□□□□□ -0.54
ARHGEF39-201ENST00000378387 HPSEQ9Y251 543 aa11.7□□□□□ -0.54
ARHGEF39-201ENST00000378387 FAM107AO95990 144 aa11.69□□□□□ -0.54
ARHGEF39-201ENST00000378387 MCM7P33993 719 aa11.69□□□□□ -0.54
ARHGEF39-201ENST00000378387 ANKRD13DQ6ZTN6 518 aa11.69□□□□□ -0.54
ARHGEF39-201ENST00000378387 TBC1D22AQ8WUA7 517 aa11.69□□□□□ -0.54
ARHGEF39-201ENST00000378387 AGPAT5Q9NUQ2 364 aa11.69□□□□□ -0.54
ARHGEF39-201ENST00000378387 GDAQ9Y2T3 454 aa11.69□□□□□ -0.54
ARHGEF39-201ENST00000378387 HYOU1Q9Y4L1 999 aa11.69□□□□□ -0.54
ARHGEF39-201ENST00000378387 ZFYVE16Q7Z3T8 1539 aa11.69□□□□□ -0.54
ARHGEF39-201ENST00000378387 GRIN2DO15399 1336 aa11.69□□□□□ -0.54
ARHGEF39-201ENST00000378387 SHOX2O60902 331 aaPredicted RBP11.69□□□□□ -0.54
ARHGEF39-201ENST00000378387 ANP32DO95626 131 aa11.69□□□□□ -0.54
ARHGEF39-201ENST00000378387 PDHA1P08559 390 aa11.69□□□□□ -0.54
ARHGEF39-201ENST00000378387 POLE2P56282 527 aa11.69□□□□□ -0.54
ARHGEF39-201ENST00000378387 RTN1Q16799 776 aa11.69□□□□□ -0.54
ARHGEF39-201ENST00000378387 RPUSD2Q8IZ73 545 aaKnown RBP11.69□□□□□ -0.54
ARHGEF39-201ENST00000378387 MSL3Q8N5Y2 521 aaKnown RBP11.69□□□□□ -0.54
ARHGEF39-201ENST00000378387 MGARPQ8TDB4 240 aa11.69□□□□□ -0.54
ARHGEF39-201ENST00000378387 LRRC59Q96AG4 307 aaKnown RBP11.69□□□□□ -0.54
ARHGEF39-201ENST00000378387 ZCCHC11Q5TAX3 1644 aaKnown RBP11.69□□□□□ -0.54
ARHGEF39-201ENST00000378387 ARHGEF10O15013 1369 aa11.69□□□□□ -0.54
ARHGEF39-201ENST00000378387 CD163L1Q9NR16 1453 aa11.69□□□□□ -0.54
ARHGEF39-201ENST00000378387 IRF6O14896 467 aa11.69□□□□□ -0.54
ARHGEF39-201ENST00000378387 GPAA1O43292 621 aa11.69□□□□□ -0.54
ARHGEF39-201ENST00000378387 FTCDO95954 541 aa11.69□□□□□ -0.54
ARHGEF39-201ENST00000378387 PARP1P09874 1014 aaKnown RBP11.69□□□□□ -0.54
ARHGEF39-201ENST00000378387 FAM153BP0C7A2 387 aa11.69□□□□□ -0.54
ARHGEF39-201ENST00000378387 RASSF7Q02833 373 aa11.69□□□□□ -0.54
ARHGEF39-201ENST00000378387 FAM153CQ494X1 144 aa11.69□□□□□ -0.54
ARHGEF39-201ENST00000378387 PIK3R5Q8WYR1 880 aa11.69□□□□□ -0.54
ARHGEF39-201ENST00000378387 ATP6V1G3Q96LB4 118 aa11.69□□□□□ -0.54
ARHGEF39-201ENST00000378387 NAPBQ9H115 298 aa11.69□□□□□ -0.54
ARHGEF39-201ENST00000378387 NUCKS1Q9H1E3 243 aaKnown RBP11.69□□□□□ -0.54
ARHGEF39-201ENST00000378387 FAM153AQ9UHL3 310 aa11.69□□□□□ -0.54
ARHGEF39-201ENST00000378387 PTPAQ15257 358 aa11.68□□□□□ -0.54
ARHGEF39-201ENST00000378387 PI16Q6UXB8 463 aa11.68□□□□□ -0.54
ARHGEF39-201ENST00000378387 CSGALNACT2Q8N6G5 542 aa11.68□□□□□ -0.54
ARHGEF39-201ENST00000378387 PAGE5Q96GU1 130 aa11.68□□□□□ -0.54
ARHGEF39-201ENST00000378387 SEC16BQ96JE7 1060 aa11.68□□□□□ -0.54
ARHGEF39-201ENST00000378387 NOC4LQ9BVI4 516 aaKnown RBP11.68□□□□□ -0.54
ARHGEF39-201ENST00000378387 SEC31BQ9NQW1 1179 aa11.68□□□□□ -0.54
ARHGEF39-201ENST00000378387 MINDY4BA8MYZ0 360 aa11.68□□□□□ -0.54
ARHGEF39-201ENST00000378387 PSMD14O00487 310 aa11.68□□□□□ -0.54
ARHGEF39-201ENST00000378387 STAT6P42226 847 aa11.68□□□□□ -0.54
ARHGEF39-201ENST00000378387 SCTRP47872 440 aa11.68□□□□□ -0.54
ARHGEF39-201ENST00000378387 FNTAP49354 379 aa11.68□□□□□ -0.54
ARHGEF39-201ENST00000378387 AMPD2Q01433 879 aa11.68□□□□□ -0.54
ARHGEF39-201ENST00000378387 EHHADHQ08426 723 aa11.68□□□□□ -0.54
ARHGEF39-201ENST00000378387 GCKRQ14397 625 aa11.68□□□□□ -0.54
ARHGEF39-201ENST00000378387 TCP11X2Q5H9J9 407 aa11.68□□□□□ -0.54
ARHGEF39-201ENST00000378387 APOA5Q6Q788 366 aa11.68□□□□□ -0.54
ARHGEF39-201ENST00000378387 TSC22D3Q99576 134 aa11.68□□□□□ -0.54
ARHGEF39-201ENST00000378387 ELAC2Q9BQ52 826 aaKnown RBP11.68□□□□□ -0.54
ARHGEF39-201ENST00000378387 SENP2Q9HC62 589 aa11.68□□□□□ -0.54
ARHGEF39-201ENST00000378387 RBM12Q9NTZ6 932 aaKnown RBP11.68□□□□□ -0.54
ARHGEF39-201ENST00000378387 PACSIN2Q9UNF0 486 aaPredicted RBP11.68□□□□□ -0.54
ARHGEF39-201ENST00000378387 SLC4A4Q9Y6R1 1079 aa11.68□□□□□ -0.54
ARHGEF39-201ENST00000378387 KDRP35968 1356 aa11.68□□□□□ -0.54
ARHGEF39-201ENST00000378387 COL15A1P39059 1388 aa11.68□□□□□ -0.54
ARHGEF39-201ENST00000378387 PSMA7O14818 248 aa11.68□□□□□ -0.54
ARHGEF39-201ENST00000378387 PRDM1O75626 825 aa11.68□□□□□ -0.54
ARHGEF39-201ENST00000378387 TCP1P17987 556 aaKnown RBP11.68□□□□□ -0.54
ARHGEF39-201ENST00000378387 ZMYM1Q5SVZ6 1142 aa11.68□□□□□ -0.54
ARHGEF39-201ENST00000378387 CCDC197Q8NCU1 140 aa11.68□□□□□ -0.54
ARHGEF39-201ENST00000378387 ZCWPW1Q9H0M4 648 aa11.68□□□□□ -0.54
ARHGEF39-201ENST00000378387 GLI2P10070 1586 aa11.67□□□□□ -0.54
ARHGEF39-201ENST00000378387 NEFHP12036 1026 aa11.67□□□□□ -0.54
ARHGEF39-201ENST00000378387 PTPREP23469 700 aa11.67□□□□□ -0.54
ARHGEF39-201ENST00000378387 TAF11Q15544 211 aa11.67□□□□□ -0.54
ARHGEF39-201ENST00000378387 RRAGAQ7L523 313 aa11.67□□□□□ -0.54
ARHGEF39-201ENST00000378387 OSBPL9Q96SU4 736 aa11.67□□□□□ -0.54
ARHGEF39-201ENST00000378387 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.67□□□□□ -0.54
ARHGEF39-201ENST00000378387 DPH5Q9H2P9 285 aa11.67□□□□□ -0.54
ARHGEF39-201ENST00000378387 NLRC4Q9NPP4 1024 aa11.67□□□□□ -0.54
ARHGEF39-201ENST00000378387 C21orf2O43822 256 aa11.67□□□□□ -0.54
ARHGEF39-201ENST00000378387 EVI5O60447 810 aa11.67□□□□□ -0.54
ARHGEF39-201ENST00000378387 GUCY1A2P33402 732 aa11.67□□□□□ -0.54
ARHGEF39-201ENST00000378387 MAGOHP61326 146 aaKnown RBP11.67□□□□□ -0.54
ARHGEF39-201ENST00000378387 RUFY4Q6ZNE9 571 aa11.67□□□□□ -0.54
ARHGEF39-201ENST00000378387 MDM1Q8TC05 714 aa11.67□□□□□ -0.54
ARHGEF39-201ENST00000378387 OXER1Q8TDS5 423 aa11.67□□□□□ -0.54
ARHGEF39-201ENST00000378387 CUL5Q93034 780 aa11.67□□□□□ -0.54
ARHGEF39-201ENST00000378387 MAGOHBQ96A72 148 aaKnown RBP11.67□□□□□ -0.54
ARHGEF39-201ENST00000378387 LBHD1Q9BQE6 289 aaPredicted RBP11.67□□□□□ -0.54
ARHGEF39-201ENST00000378387 NOP53Q9NZM5 478 aaKnown RBP11.67□□□□□ -0.54
ARHGEF39-201ENST00000378387 HPS5Q9UPZ3 1129 aa11.67□□□□□ -0.54
ARHGEF39-201ENST00000378387 CEP104O60308 925 aa11.67□□□□□ -0.54
ARHGEF39-201ENST00000378387 LGR5O75473 907 aa11.67□□□□□ -0.54
ARHGEF39-201ENST00000378387 CCDC57Q2TAC2 916 aa11.67□□□□□ -0.54
ARHGEF39-201ENST00000378387 NLRP3Q96P20 1036 aa11.67□□□□□ -0.54
ARHGEF39-201ENST00000378387 SH3GL2Q99962 352 aa11.67□□□□□ -0.54
ARHGEF39-201ENST00000378387 SNX12Q9UMY4 172 aa11.67□□□□□ -0.54
ARHGEF39-201ENST00000378387 ASXL2Q76L83 1435 aa11.66□□□□□ -0.54
ARHGEF39-201ENST00000378387 FLT4P35916 1363 aa11.66□□□□□ -0.54
ARHGEF39-201ENST00000378387 DNM1LO00429 736 aa11.66□□□□□ -0.54
ARHGEF39-201ENST00000378387 KLK7P49862 253 aa11.66□□□□□ -0.54
ARHGEF39-201ENST00000378387 RWDD2BP57060 319 aa11.66□□□□□ -0.54
ARHGEF39-201ENST00000378387 LACTBP83111 547 aaPredicted RBP11.66□□□□□ -0.54
ARHGEF39-201ENST00000378387 PTPN12Q05209 780 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms