RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 GMCL1Q96IK5 515 aa18.18■□□□□ 0.5
RAB4B-202ENST00000378307 TMEM47Q9BQJ4 181 aa18.18■□□□□ 0.5
RAB4B-202ENST00000378307 SLC38A10Q9HBR0 1119 aa18.18■□□□□ 0.5
RAB4B-202ENST00000378307 RAVER2Q9HCJ3 691 aaKnown RBP18.18■□□□□ 0.5
RAB4B-202ENST00000378307 FEM1BQ9UK73 627 aa18.18■□□□□ 0.5
RAB4B-202ENST00000378307 MTMR7Q9Y216 660 aa18.18■□□□□ 0.5
RAB4B-202ENST00000378307 SMCHD1A6NHR9 2005 aa18.18■□□□□ 0.5
RAB4B-202ENST00000378307 SLC25A27O95847 323 aa18.17■□□□□ 0.5
RAB4B-202ENST00000378307 SLC1A4P43007 532 aa18.17■□□□□ 0.5
RAB4B-202ENST00000378307 MNX1P50219 401 aaPredicted RBP18.17■□□□□ 0.5
RAB4B-202ENST00000378307 PTH1RQ03431 593 aa18.17■□□□□ 0.5
RAB4B-202ENST00000378307 DPP9Q86TI2 863 aa18.17■□□□□ 0.5
RAB4B-202ENST00000378307 CPXCR1Q8N123 301 aa18.17■□□□□ 0.5
RAB4B-202ENST00000378307 TRPV1Q8NER1 839 aa18.17■□□□□ 0.5
RAB4B-202ENST00000378307 ZKSCAN3Q9BRR0 538 aa18.17■□□□□ 0.5
RAB4B-202ENST00000378307 PLXNA1Q9UIW2 1896 aa18.17■□□□□ 0.5
RAB4B-202ENST00000378307 ZBED4O75132 1171 aa18.16■□□□□ 0.5
RAB4B-202ENST00000378307 PGK2P07205 417 aa18.16■□□□□ 0.5
RAB4B-202ENST00000378307 FCER1AP12319 257 aa18.16■□□□□ 0.5
RAB4B-202ENST00000378307 SLC4A3P48751 1232 aa18.16■□□□□ 0.5
RAB4B-202ENST00000378307 SNAP25P60880 206 aa18.16■□□□□ 0.5
RAB4B-202ENST00000378307 LHX8Q68G74 356 aa18.16■□□□□ 0.5
RAB4B-202ENST00000378307 SNRNP48Q6IEG0 339 aaKnown RBP18.16■□□□□ 0.5
RAB4B-202ENST00000378307 ABRAQ8N0Z2 381 aa18.16■□□□□ 0.5
RAB4B-202ENST00000378307 DIS3LQ8TF46 1054 aaKnown RBP18.16■□□□□ 0.5
RAB4B-202ENST00000378307 ATP2A1O14983 1001 aa18.15■□□□□ 0.5
RAB4B-202ENST00000378307 FARP2O94887 1054 aaPredicted RBP18.15■□□□□ 0.5
RAB4B-202ENST00000378307 TOP1P11387 765 aaKnown RBP18.15■□□□□ 0.5
RAB4B-202ENST00000378307 PCP11498 1178 aaKnown RBP18.15■□□□□ 0.5
RAB4B-202ENST00000378307 PPP4R3BQ5MIZ7 849 aa18.15■□□□□ 0.5
RAB4B-202ENST00000378307 TTBK2Q6IQ55 1244 aa18.15■□□□□ 0.5
RAB4B-202ENST00000378307 CENPQQ7L2Z9 268 aaPredicted RBP18.15■□□□□ 0.5
RAB4B-202ENST00000378307 MMP19Q99542 508 aa18.15■□□□□ 0.5
RAB4B-202ENST00000378307 TEX13BQ9BXU2 312 aa18.15■□□□□ 0.5
RAB4B-202ENST00000378307 RNF41Q9H4P4 317 aaPredicted RBP18.15■□□□□ 0.5
RAB4B-202ENST00000378307 ISY1Q9ULR0 285 aaKnown RBP18.15■□□□□ 0.5
RAB4B-202ENST00000378307 TAF6LQ9Y6J9 622 aa18.15■□□□□ 0.5
RAB4B-202ENST00000378307 ZNF536O15090 1300 aa18.15■□□□□ 0.5
RAB4B-202ENST00000378307 FRMPD3Q5JV73 1810 aa18.14■□□□□ 0.5
RAB4B-202ENST00000378307 B4E1Z4 1266 aa18.14■□□□□ 0.49
RAB4B-202ENST00000378307 SGSM2O43147 1006 aa18.14■□□□□ 0.49
RAB4B-202ENST00000378307 KDM4AO75164 1064 aa18.14■□□□□ 0.49
RAB4B-202ENST00000378307 STAT2P52630 851 aa18.14■□□□□ 0.49
RAB4B-202ENST00000378307 IMMTQ16891 758 aaKnown RBP18.14■□□□□ 0.49
RAB4B-202ENST00000378307 ZNF792Q3KQV3 632 aa18.14■□□□□ 0.49
RAB4B-202ENST00000378307 MFSD14CQ5VZR4 134 aa18.14■□□□□ 0.49
RAB4B-202ENST00000378307 ESR2Q92731 530 aa18.14■□□□□ 0.49
RAB4B-202ENST00000378307 PAWRQ96IZ0 340 aaKnown RBP18.14■□□□□ 0.49
RAB4B-202ENST00000378307 MAML3Q96JK9 1138 aa18.14■□□□□ 0.49
RAB4B-202ENST00000378307 ZSWIM5Q9P217 1185 aa18.14■□□□□ 0.49
RAB4B-202ENST00000378307 OGDHLQ9ULD0 1010 aa18.14■□□□□ 0.49
RAB4B-202ENST00000378307 RAD50Q92878 1312 aa18.14■□□□□ 0.49
RAB4B-202ENST00000378307 PLA2G6O60733 806 aa18.13■□□□□ 0.49
RAB4B-202ENST00000378307 CYBAP13498 195 aa18.13■□□□□ 0.49
RAB4B-202ENST00000378307 TAL1P17542 331 aaPredicted RBP18.13■□□□□ 0.49
RAB4B-202ENST00000378307 SLC16A2P36021 539 aa18.13■□□□□ 0.49
RAB4B-202ENST00000378307 PRAMEF19Q5SWL8 479 aa18.13■□□□□ 0.49
RAB4B-202ENST00000378307 PRPF38BQ5VTL8 546 aaKnown RBP18.13■□□□□ 0.49
RAB4B-202ENST00000378307 OLFML2BQ68BL8 750 aa18.13■□□□□ 0.49
RAB4B-202ENST00000378307 CHURC1Q8WUH1 139 aa18.13■□□□□ 0.49
RAB4B-202ENST00000378307 AGBL1Q96MI9 1066 aa18.13■□□□□ 0.49
RAB4B-202ENST00000378307 PRR12Q9ULL5 1215 aa18.13■□□□□ 0.49
RAB4B-202ENST00000378307 ALPK3Q96L96 1907 aa18.13■□□□□ 0.49
RAB4B-202ENST00000378307 PDHBP11177 359 aa18.12■□□□□ 0.49
RAB4B-202ENST00000378307 IKQ13123 557 aaPredicted RBP18.12■□□□□ 0.49
RAB4B-202ENST00000378307 CCDC96Q2M329 555 aa18.12■□□□□ 0.49
RAB4B-202ENST00000378307 FAM160B2Q86V87 743 aa18.12■□□□□ 0.49
RAB4B-202ENST00000378307 DCAF4Q8WV16 495 aa18.12■□□□□ 0.49
RAB4B-202ENST00000378307 TTC14Q96N46 770 aa18.12■□□□□ 0.49
RAB4B-202ENST00000378307 GPCPD1Q9NPB8 672 aa18.12■□□□□ 0.49
RAB4B-202ENST00000378307 CTNNA3Q9UI47 895 aa18.12■□□□□ 0.49
RAB4B-202ENST00000378307 FRMPD2Q68DX3 1309 aaPredicted RBP18.12■□□□□ 0.49
RAB4B-202ENST00000378307 DNAH12Q6ZR08 3092 aa18.12■□□□□ 0.49
RAB4B-202ENST00000378307 CYP21A2P08686 494 aa18.11■□□□□ 0.49
RAB4B-202ENST00000378307 KCTD2Q14681 263 aa18.11■□□□□ 0.49
RAB4B-202ENST00000378307 RUFY2Q8WXA3 655 aa18.11■□□□□ 0.49
RAB4B-202ENST00000378307 HOMER2Q9NSB8 354 aa18.11■□□□□ 0.49
RAB4B-202ENST00000378307 CTDP1Q9Y5B0 961 aaPredicted RBP18.11■□□□□ 0.49
RAB4B-202ENST00000378307 DNAJC25-GNG10A0A024R161 153 aa18.1■□□□□ 0.49
RAB4B-202ENST00000378307 SNHG28P0DPA3 235 aa18.1■□□□□ 0.49
RAB4B-202ENST00000378307 CNGA1P29973 690 aa18.1■□□□□ 0.49
RAB4B-202ENST00000378307 COPB2P35606 906 aa18.1■□□□□ 0.49
RAB4B-202ENST00000378307 OAZ1P54368 228 aa18.1■□□□□ 0.49
RAB4B-202ENST00000378307 CCDC174Q6PII3 467 aa18.1■□□□□ 0.49
RAB4B-202ENST00000378307 BTNL9Q6UXG8 535 aa18.1■□□□□ 0.49
RAB4B-202ENST00000378307 CYB5R4Q7L1T6 521 aa18.1■□□□□ 0.49
RAB4B-202ENST00000378307 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.1■□□□□ 0.49
RAB4B-202ENST00000378307 DGKHQ86XP1 1220 aa18.1■□□□□ 0.49
RAB4B-202ENST00000378307 ZSCAN10Q96SZ4 725 aaPredicted RBP18.1■□□□□ 0.49
RAB4B-202ENST00000378307 SLC5A4Q9NY91 659 aa18.1■□□□□ 0.49
RAB4B-202ENST00000378307 FDX1P10109 184 aa18.09■□□□□ 0.49
RAB4B-202ENST00000378307 ZNF543Q08ER8 600 aa18.09■□□□□ 0.49
RAB4B-202ENST00000378307 ANO1Q5XXA6 986 aa18.09■□□□□ 0.49
RAB4B-202ENST00000378307 ENAHQ8N8S7 591 aaPredicted RBP18.09■□□□□ 0.49
RAB4B-202ENST00000378307 ANKLE1Q8NAG6 615 aa18.09■□□□□ 0.49
RAB4B-202ENST00000378307 ANKS1AQ92625 1134 aa18.09■□□□□ 0.49
RAB4B-202ENST00000378307 DPF3Q92784 378 aa18.09■□□□□ 0.49
RAB4B-202ENST00000378307 MAP4K1Q92918 833 aa18.09■□□□□ 0.49
RAB4B-202ENST00000378307 FGD4Q96M96 766 aa18.09■□□□□ 0.49
RAB4B-202ENST00000378307 CPVLQ9H3G5 476 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms