RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 ARHGAP44Q17R89 818 aa13.22□□□□□ -0.29
PCDHA9-201ENST00000378122 KSR1Q8IVT5 923 aa13.22□□□□□ -0.29
PCDHA9-201ENST00000378122 SUDS3Q9H7L9 328 aaPredicted RBP13.22□□□□□ -0.29
PCDHA9-201ENST00000378122 CTNNA1P35221 906 aaKnown RBP13.22□□□□□ -0.29
PCDHA9-201ENST00000378122 SMTNP53814 917 aa13.22□□□□□ -0.29
PCDHA9-201ENST00000378122 CLIC6Q96NY7 704 aa13.22□□□□□ -0.29
PCDHA9-201ENST00000378122 ABCF3Q9NUQ8 709 aa13.22□□□□□ -0.29
PCDHA9-201ENST00000378122 DDX41Q9UJV9 622 aaKnown RBP13.22□□□□□ -0.29
PCDHA9-201ENST00000378122 TXNDC9O14530 226 aa13.22□□□□□ -0.29
PCDHA9-201ENST00000378122 KRT25Q7Z3Z0 450 aa13.22□□□□□ -0.29
PCDHA9-201ENST00000378122 APOL6Q9BWW8 343 aa13.22□□□□□ -0.29
PCDHA9-201ENST00000378122 NPC1L1Q9UHC9 1359 aa13.21□□□□□ -0.29
PCDHA9-201ENST00000378122 ARPP19P56211 112 aa13.21□□□□□ -0.29
PCDHA9-201ENST00000378122 USP40Q9NVE5 1235 aa13.21□□□□□ -0.29
PCDHA9-201ENST00000378122 FRMD3A2A2Y4 597 aa13.21□□□□□ -0.29
PCDHA9-201ENST00000378122 ARHGEF35A5YM69 484 aa13.21□□□□□ -0.29
PCDHA9-201ENST00000378122 PABPC4Q13310 644 aaKnown RBP eCLIP13.21□□□□□ -0.29
PCDHA9-201ENST00000378122 MYSM1Q5VVJ2 828 aa13.21□□□□□ -0.29
PCDHA9-201ENST00000378122 PALM3A6NDB9 673 aaPredicted RBP13.21□□□□□ -0.29
PCDHA9-201ENST00000378122 TNFAIP1Q13829 316 aa13.21□□□□□ -0.29
PCDHA9-201ENST00000378122 GCKRQ14397 625 aa13.21□□□□□ -0.29
PCDHA9-201ENST00000378122 ZNF827Q17R98 1081 aa13.21□□□□□ -0.29
PCDHA9-201ENST00000378122 KRT71Q3SY84 523 aa13.21□□□□□ -0.29
PCDHA9-201ENST00000378122 U2AF1L4Q8WU68 220 aaKnown RBP13.21□□□□□ -0.29
PCDHA9-201ENST00000378122 PPP1R16BQ96T49 567 aa13.21□□□□□ -0.29
PCDHA9-201ENST00000378122 ZSWIM6Q9HCJ5 1215 aa13.21□□□□□ -0.29
PCDHA9-201ENST00000378122 DAPK3O43293 454 aa13.21□□□□□ -0.29
PCDHA9-201ENST00000378122 PPFIA4O75335 1185 aa13.21□□□□□ -0.29
PCDHA9-201ENST00000378122 GAS8O95995 478 aa13.21□□□□□ -0.29
PCDHA9-201ENST00000378122 ADCY9O60503 1353 aa13.21□□□□□ -0.3
PCDHA9-201ENST00000378122 OSBPP22059 807 aa13.21□□□□□ -0.3
PCDHA9-201ENST00000378122 SNX16P57768 344 aa13.21□□□□□ -0.3
PCDHA9-201ENST00000378122 CCDC51Q96ER9 411 aa13.21□□□□□ -0.3
PCDHA9-201ENST00000378122 BABAM1Q9NWV8 329 aa13.21□□□□□ -0.3
PCDHA9-201ENST00000378122 CDC25BP30305 580 aa13.2□□□□□ -0.3
PCDHA9-201ENST00000378122 STRN3Q13033 797 aa13.2□□□□□ -0.3
PCDHA9-201ENST00000378122 ANKRD35Q8N283 1001 aa13.2□□□□□ -0.3
PCDHA9-201ENST00000378122 RAB3IPQ96QF0 476 aaPredicted RBP13.2□□□□□ -0.3
PCDHA9-201ENST00000378122 TM6SF1Q9BZW5 370 aa13.2□□□□□ -0.3
PCDHA9-201ENST00000378122 SLC52A2Q9HAB3 445 aa13.2□□□□□ -0.3
PCDHA9-201ENST00000378122 CASQ2O14958 399 aaPredicted RBP13.2□□□□□ -0.3
PCDHA9-201ENST00000378122 PTPN21Q16825 1174 aa13.2□□□□□ -0.3
PCDHA9-201ENST00000378122 FAM71BQ8TC56 605 aa13.2□□□□□ -0.3
PCDHA9-201ENST00000378122 DNM3Q9UQ16 869 aa13.2□□□□□ -0.3
PCDHA9-201ENST00000378122 ZMYM6O95789 1325 aa13.2□□□□□ -0.3
PCDHA9-201ENST00000378122 KCNK3O14649 394 aa13.2□□□□□ -0.3
PCDHA9-201ENST00000378122 AP5M1Q9H0R1 490 aa13.2□□□□□ -0.3
PCDHA9-201ENST00000378122 VPS37BQ9H9H4 285 aa13.2□□□□□ -0.3
PCDHA9-201ENST00000378122 FANCLQ9NW38 375 aa13.2□□□□□ -0.3
PCDHA9-201ENST00000378122 EXOC7Q9UPT5 735 aa13.2□□□□□ -0.3
PCDHA9-201ENST00000378122 FLOT1O75955 427 aa13.2□□□□□ -0.3
PCDHA9-201ENST00000378122 KRT15P19012 456 aa13.2□□□□□ -0.3
PCDHA9-201ENST00000378122 PPARAQ07869 468 aa13.2□□□□□ -0.3
PCDHA9-201ENST00000378122 MUM1Q2TAK8 710 aa13.2□□□□□ -0.3
PCDHA9-201ENST00000378122 MAPKAPK5Q8IW41 473 aa13.2□□□□□ -0.3
PCDHA9-201ENST00000378122 LBHD1Q9BQE6 289 aaPredicted RBP13.2□□□□□ -0.3
PCDHA9-201ENST00000378122 DBNDD1Q9H9R9 158 aa13.2□□□□□ -0.3
PCDHA9-201ENST00000378122 ABCC10Q5T3U5 1492 aa13.2□□□□□ -0.3
PCDHA9-201ENST00000378122 CCDC38Q502W7 563 aa13.2□□□□□ -0.3
PCDHA9-201ENST00000378122 CROCCP2Q86T23 111 aa13.2□□□□□ -0.3
PCDHA9-201ENST00000378122 CCT6BQ92526 530 aa13.2□□□□□ -0.3
PCDHA9-201ENST00000378122 MYCBPQ99417 103 aaPredicted RBP13.2□□□□□ -0.3
PCDHA9-201ENST00000378122 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.2□□□□□ -0.3
PCDHA9-201ENST00000378122 IBTKQ9P2D0 1353 aaPredicted RBP13.2□□□□□ -0.3
PCDHA9-201ENST00000378122 TRPC3Q13507 836 aa13.2□□□□□ -0.3
PCDHA9-201ENST00000378122 TBC1D10BQ4KMP7 808 aaPredicted RBP13.2□□□□□ -0.3
PCDHA9-201ENST00000378122 GANCQ8TET4 914 aa13.2□□□□□ -0.3
PCDHA9-201ENST00000378122 FAM184BQ9ULE4 1060 aa13.2□□□□□ -0.3
PCDHA9-201ENST00000378122 PCDHA7Q9UN72 937 aa13.2□□□□□ -0.3
PCDHA9-201ENST00000378122 PFKFB2O60825 505 aa13.19□□□□□ -0.3
PCDHA9-201ENST00000378122 ATP5JP18859 108 aa13.19□□□□□ -0.3
PCDHA9-201ENST00000378122 GCKP35557 465 aa13.19□□□□□ -0.3
PCDHA9-201ENST00000378122 SPON1Q9HCB6 807 aa13.19□□□□□ -0.3
PCDHA9-201ENST00000378122 ADAMTS12P58397 1594 aa13.19□□□□□ -0.3
PCDHA9-201ENST00000378122 ARHGEF10O15013 1369 aa13.19□□□□□ -0.3
PCDHA9-201ENST00000378122 GMNNO75496 209 aa13.19□□□□□ -0.3
PCDHA9-201ENST00000378122 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.19□□□□□ -0.3
PCDHA9-201ENST00000378122 TGFBRAP1Q8WUH2 860 aa13.19□□□□□ -0.3
PCDHA9-201ENST00000378122 CNKSR1Q969H4 720 aa13.19□□□□□ -0.3
PCDHA9-201ENST00000378122 KIF9Q9HAQ2 790 aa13.19□□□□□ -0.3
PCDHA9-201ENST00000378122 AMFRQ9UKV5 643 aa13.19□□□□□ -0.3
PCDHA9-201ENST00000378122 NOC2LQ9Y3T9 749 aaKnown RBP13.19□□□□□ -0.3
PCDHA9-201ENST00000378122 LPIN2Q92539 896 aa13.19□□□□□ -0.3
PCDHA9-201ENST00000378122 ZNF274Q96GC6 653 aaPredicted RBP13.19□□□□□ -0.3
PCDHA9-201ENST00000378122 RAB17Q9H0T7 212 aa13.19□□□□□ -0.3
PCDHA9-201ENST00000378122 I3L4J1 428 aa13.19□□□□□ -0.3
PCDHA9-201ENST00000378122 RGS16O15492 202 aaPredicted RBP13.19□□□□□ -0.3
PCDHA9-201ENST00000378122 CFBP00751 764 aa13.19□□□□□ -0.3
PCDHA9-201ENST00000378122 PPME1Q9Y570 386 aa13.19□□□□□ -0.3
PCDHA9-201ENST00000378122 SCRN1Q12765 414 aa13.19□□□□□ -0.3
PCDHA9-201ENST00000378122 USPL1Q5W0Q7 1092 aa13.19□□□□□ -0.3
PCDHA9-201ENST00000378122 TRIM58Q8NG06 486 aa13.19□□□□□ -0.3
PCDHA9-201ENST00000378122 MED10Q9BTT4 135 aa13.19□□□□□ -0.3
PCDHA9-201ENST00000378122 HYOU1Q9Y4L1 999 aa13.19□□□□□ -0.3
PCDHA9-201ENST00000378122 TESPA1A2RU30 521 aaPredicted RBP13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 KIF3CO14782 793 aa13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 BCRP11274 1271 aa13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 DCAF15Q66K64 600 aa13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 DNAJC10Q8IXB1 793 aa13.18□□□□□ -0.3
PCDHA9-201ENST00000378122 ARHGAP24Q8N264 748 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms