RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 KIFC2Q96AC6 838 aa14.99□□□□□ -0.01
CBWD3-203ENST00000377344 C12orf42Q96LP6 360 aa14.99□□□□□ -0.01
CBWD3-203ENST00000377344 ALG1Q9BT22 464 aa14.99□□□□□ -0.01
CBWD3-203ENST00000377344 FEM1BQ9UK73 627 aa14.99□□□□□ -0.01
CBWD3-203ENST00000377344 KCNH4Q9UQ05 1017 aa14.99□□□□□ -0.01
CBWD3-203ENST00000377344 A0A0G2JLL6 359 aaPredicted RBP14.99□□□□□ -0.01
CBWD3-203ENST00000377344 FLOT1O75955 427 aa14.99□□□□□ -0.01
CBWD3-203ENST00000377344 SNAPC2Q13487 334 aa14.99□□□□□ -0.01
CBWD3-203ENST00000377344 SYDE2Q5VT97 1194 aa14.99□□□□□ -0.01
CBWD3-203ENST00000377344 PRRT2Q7Z6L0 340 aaPredicted RBP14.99□□□□□ -0.01
CBWD3-203ENST00000377344 AIFM3Q96NN9 605 aa14.99□□□□□ -0.01
CBWD3-203ENST00000377344 PIGSQ96S52 555 aa14.99□□□□□ -0.01
CBWD3-203ENST00000377344 RIOX1Q9H6W3 641 aa14.99□□□□□ -0.01
CBWD3-203ENST00000377344 JMJD4Q9H9V9 463 aa14.99□□□□□ -0.01
CBWD3-203ENST00000377344 FBXO28Q9NVF7 368 aa14.99□□□□□ -0.01
CBWD3-203ENST00000377344 RBM27Q9P2N5 1060 aaKnown RBP14.99□□□□□ -0.01
CBWD3-203ENST00000377344 PDCP20941 246 aa14.98□□□□□ -0.01
CBWD3-203ENST00000377344 FAM160B2Q86V87 743 aa14.98□□□□□ -0.01
CBWD3-203ENST00000377344 BAZ2BQ9UIF8 2168 aaKnown RBP14.98□□□□□ -0.01
CBWD3-203ENST00000377344 VPS37CA5D8V6 355 aaPredicted RBP14.97□□□□□ -0.01
CBWD3-203ENST00000377344 H3BQV1 296 aa14.97□□□□□ -0.01
CBWD3-203ENST00000377344 SCG2P13521 617 aa14.97□□□□□ -0.01
CBWD3-203ENST00000377344 SYT1P21579 422 aa14.97□□□□□ -0.01
CBWD3-203ENST00000377344 SNAP25P60880 206 aa14.97□□□□□ -0.01
CBWD3-203ENST00000377344 TRIM29Q14134 588 aa14.97□□□□□ -0.01
CBWD3-203ENST00000377344 TREML2Q5T2D2 321 aa14.97□□□□□ -0.01
CBWD3-203ENST00000377344 IFFO2Q5TF58 517 aa14.97□□□□□ -0.01
CBWD3-203ENST00000377344 SPRYD7Q5W111 196 aa14.97□□□□□ -0.01
CBWD3-203ENST00000377344 RGMBQ6NW40 437 aa14.97□□□□□ -0.01
CBWD3-203ENST00000377344 BTNL9Q6UXG8 535 aa14.97□□□□□ -0.01
CBWD3-203ENST00000377344 PROCA1Q8NCQ7 364 aaPredicted RBP14.97□□□□□ -0.01
CBWD3-203ENST00000377344 C8orf76Q96K31 380 aa14.97□□□□□ -0.01
CBWD3-203ENST00000377344 SLF1Q9BQI6 1058 aa14.97□□□□□ -0.01
CBWD3-203ENST00000377344 PRR12Q9ULL5 1215 aa14.97□□□□□ -0.01
CBWD3-203ENST00000377344 TLL2Q9Y6L7 1015 aa14.97□□□□□ -0.01
CBWD3-203ENST00000377344 MYH6P13533 1939 aa14.97□□□□□ -0.01
CBWD3-203ENST00000377344 ZBTB48P10074 688 aaPredicted RBP14.96□□□□□ -0.01
CBWD3-203ENST00000377344 PTPRFP10586 1907 aa14.96□□□□□ -0.01
CBWD3-203ENST00000377344 GTF2A2P52657 109 aa14.96□□□□□ -0.01
CBWD3-203ENST00000377344 GUCY1B3Q02153 619 aa14.96□□□□□ -0.01
CBWD3-203ENST00000377344 PKN1Q16512 942 aa14.96□□□□□ -0.01
CBWD3-203ENST00000377344 CDC37Q16543 378 aaPredicted RBP14.96□□□□□ -0.01
CBWD3-203ENST00000377344 PFKFB3Q16875 520 aaPredicted RBP14.96□□□□□ -0.01
CBWD3-203ENST00000377344 PAXIP1Q6ZW49 1069 aaPredicted RBP14.96□□□□□ -0.01
CBWD3-203ENST00000377344 FASTKD5Q7L8L6 764 aaKnown RBP14.96□□□□□ -0.01
CBWD3-203ENST00000377344 HEATR3Q7Z4Q2 680 aa14.96□□□□□ -0.01
CBWD3-203ENST00000377344 GPKOWQ92917 476 aaPredicted RBP eCLIP14.96□□□□□ -0.01
CBWD3-203ENST00000377344 USP17L15C9J2P7 530 aa14.96□□□□□ -0.01
CBWD3-203ENST00000377344 USP17L13C9JLJ4 530 aa14.96□□□□□ -0.01
CBWD3-203ENST00000377344 USP17L11C9JVI0 530 aa14.96□□□□□ -0.01
CBWD3-203ENST00000377344 USP17L18D6R9N7 530 aa14.96□□□□□ -0.01
CBWD3-203ENST00000377344 USP17L22D6RA61 530 aa14.96□□□□□ -0.01
CBWD3-203ENST00000377344 USP17L17D6RBQ6 530 aa14.96□□□□□ -0.01
CBWD3-203ENST00000377344 USP17L19D6RCP7 530 aa14.96□□□□□ -0.01
CBWD3-203ENST00000377344 USP17L20D6RJB6 530 aa14.96□□□□□ -0.01
CBWD3-203ENST00000377344 ZBTB5O15062 677 aa14.96□□□□□ -0.01
CBWD3-203ENST00000377344 STX6O43752 255 aa14.96□□□□□ -0.01
CBWD3-203ENST00000377344 PLA2G6O60733 806 aa14.96□□□□□ -0.01
CBWD3-203ENST00000377344 XBP1P17861 261 aa14.96□□□□□ -0.01
CBWD3-203ENST00000377344 DDIT3P35638 169 aa14.96□□□□□ -0.01
CBWD3-203ENST00000377344 USP17L24Q0WX57 530 aa14.96□□□□□ -0.01
CBWD3-203ENST00000377344 FOXD4L5Q5VV16 416 aaPredicted RBP14.96□□□□□ -0.01
CBWD3-203ENST00000377344 OTUD7BQ6GQQ9 843 aa14.96□□□□□ -0.01
CBWD3-203ENST00000377344 PRPF38AQ8NAV1 312 aaKnown RBP14.96□□□□□ -0.01
CBWD3-203ENST00000377344 FOXD4L4Q8WXT5 416 aaPredicted RBP14.96□□□□□ -0.01
CBWD3-203ENST00000377344 GJB4Q9NTQ9 266 aa14.96□□□□□ -0.01
CBWD3-203ENST00000377344 CTDP1Q9Y5B0 961 aaPredicted RBP14.96□□□□□ -0.01
CBWD3-203ENST00000377344 CCL15-CCL14A0A0B4J2E2 113 aa14.95□□□□□ -0.02
CBWD3-203ENST00000377344 PNMA6FA0A0J9YX94 578 aa14.95□□□□□ -0.02
CBWD3-203ENST00000377344 CETPP11597 493 aa14.95□□□□□ -0.02
CBWD3-203ENST00000377344 GRM1Q13255 1194 aa14.95□□□□□ -0.02
CBWD3-203ENST00000377344 PKP1Q13835 747 aa14.95□□□□□ -0.02
CBWD3-203ENST00000377344 CCL15Q16663 113 aa14.95□□□□□ -0.02
CBWD3-203ENST00000377344 CCDC174Q6PII3 467 aa14.95□□□□□ -0.02
CBWD3-203ENST00000377344 CATSPERGQ6ZRH7 1159 aa14.95□□□□□ -0.02
CBWD3-203ENST00000377344 RASAL3Q86YV0 1011 aa14.95□□□□□ -0.02
CBWD3-203ENST00000377344 CHMP5Q9NZZ3 219 aa14.95□□□□□ -0.02
CBWD3-203ENST00000377344 VPS54Q9P1Q0 977 aa14.95□□□□□ -0.02
CBWD3-203ENST00000377344 COG2Q14746 738 aa14.94□□□□□ -0.02
CBWD3-203ENST00000377344 QRICH1Q2TAL8 776 aa14.94□□□□□ -0.02
CBWD3-203ENST00000377344 PPP1R9AQ9ULJ8 1098 aa14.94□□□□□ -0.02
CBWD3-203ENST00000377344 AGTPBP1Q9UPW5 1226 aa14.94□□□□□ -0.02
CBWD3-203ENST00000377344 LOC285556D6RIA3 1793 aa14.94□□□□□ -0.02
CBWD3-203ENST00000377344 IRX3P78415 501 aaPredicted RBP14.94□□□□□ -0.02
CBWD3-203ENST00000377344 NUCB2P80303 420 aa14.94□□□□□ -0.02
CBWD3-203ENST00000377344 WWC2Q6AWC2 1192 aa14.94□□□□□ -0.02
CBWD3-203ENST00000377344 MTMR8Q96EF0 704 aa14.94□□□□□ -0.02
CBWD3-203ENST00000377344 MS4A4AQ96JQ5 239 aa14.94□□□□□ -0.02
CBWD3-203ENST00000377344 CIZ1Q9ULV3 898 aaPredicted RBP14.94□□□□□ -0.02
CBWD3-203ENST00000377344 KCNJ14Q9UNX9 436 aa14.94□□□□□ -0.02
CBWD3-203ENST00000377344 APLP1P51693 650 aa14.93□□□□□ -0.02
CBWD3-203ENST00000377344 PABPC4Q13310 644 aaKnown RBP eCLIP14.93□□□□□ -0.02
CBWD3-203ENST00000377344 MOGSQ13724 837 aa14.93□□□□□ -0.02
CBWD3-203ENST00000377344 USH1GQ495M9 461 aa14.93□□□□□ -0.02
CBWD3-203ENST00000377344 KRT40Q6A162 431 aa14.93□□□□□ -0.02
CBWD3-203ENST00000377344 MCTP1Q6DN14 999 aa14.93□□□□□ -0.02
CBWD3-203ENST00000377344 FBXO11Q86XK2 927 aa14.93□□□□□ -0.02
CBWD3-203ENST00000377344 FBXO18Q8NFZ0 1043 aa14.93□□□□□ -0.02
CBWD3-203ENST00000377344 COA7Q96BR5 231 aa14.93□□□□□ -0.02
CBWD3-203ENST00000377344 ATG4CQ96DT6 458 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms