RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 XKR9Q5GH70 373 aa9.52□□□□□ -0.89
CRNKL1-202ENST00000377340 USP17L6PQ6QN14 398 aa9.52□□□□□ -0.89
CRNKL1-202ENST00000377340 FAM151AQ8WW52 585 aa9.52□□□□□ -0.89
CRNKL1-202ENST00000377340 SPAG5Q96R06 1193 aa9.52□□□□□ -0.89
CRNKL1-202ENST00000377340 GRPEL1Q9HAV7 217 aa9.52□□□□□ -0.89
CRNKL1-202ENST00000377340 TRAF5O00463 557 aa9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 EPB41L2O43491 1005 aaKnown RBP9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 RPS12P25398 132 aaKnown RBP9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 STX1AQ16623 288 aa9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 NBPF12Q5TAG4 269 aaPredicted RBP9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 MYCT1Q8N699 235 aa9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 RDH13Q8NBN7 331 aa9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 M0QZ92 97 aa9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 TNPO2O14787 897 aaKnown RBP9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 YY1P25490 414 aa9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 BIRC3Q13489 604 aa9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 CCDC65Q8IXS2 484 aa9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 FBXO18Q8NFZ0 1043 aa9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 ADARB2Q9NS39 739 aaKnown RBP9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 DDX25Q9UHL0 483 aaKnown RBP9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 SERPINA10Q9UK55 444 aa9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 TM4SF1P30408 202 aa9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 PTGDRQ13258 359 aa9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 PKP1Q13835 747 aa9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 RNF207Q6ZRF8 634 aa9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 NELFCDQ8IXH7 590 aa9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 PROM2Q8N271 834 aa9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 TTC14Q96N46 770 aa9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 PPP1R16BQ96T49 567 aa9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 SLF1Q9BQI6 1058 aa9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 RPAP3Q9H6T3 665 aaPredicted RBP9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 MACROD2A1Z1Q3 448 aa9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 DCAF17Q5H9S7 520 aaPredicted RBP9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 SPOUT1Q5T280 376 aaKnown RBP9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 TTBK2Q6IQ55 1244 aa9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 KIAA1328Q86T90 577 aa9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 CABP7Q86V35 215 aa9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 FAM160B2Q86V87 743 aa9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 TBCKQ8TEA7 893 aa9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 USP28Q96RU2 1077 aa9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 IMPG2Q9BZV3 1241 aa9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 NBPF3Q9H094 633 aa9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 RNF146Q9NTX7 359 aa9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 MED1Q15648 1581 aaPredicted RBP9.51□□□□□ -0.89
CRNKL1-202ENST00000377340 CCL15-CCL14A0A0B4J2E2 113 aa9.5□□□□□ -0.89
CRNKL1-202ENST00000377340 DKC1O60832 514 aaKnown RBP eCLIP9.5□□□□□ -0.89
CRNKL1-202ENST00000377340 CD2BP2O95400 341 aaKnown RBP9.5□□□□□ -0.89
CRNKL1-202ENST00000377340 INPP5BP32019 993 aa9.5□□□□□ -0.89
CRNKL1-202ENST00000377340 CCL15Q16663 113 aa9.5□□□□□ -0.89
CRNKL1-202ENST00000377340 PRPF38AQ8NAV1 312 aaKnown RBP9.5□□□□□ -0.89
CRNKL1-202ENST00000377340 RMDN3Q96TC7 470 aa9.5□□□□□ -0.89
CRNKL1-202ENST00000377340 BLZF1Q9H2G9 400 aa9.5□□□□□ -0.89
CRNKL1-202ENST00000377340 LARGE1O95461 756 aa9.5□□□□□ -0.89
CRNKL1-202ENST00000377340 FOSP01100 380 aaPredicted RBP9.5□□□□□ -0.89
CRNKL1-202ENST00000377340 STAT3P40763 770 aa9.5□□□□□ -0.89
CRNKL1-202ENST00000377340 ANO6Q4KMQ2 910 aa9.5□□□□□ -0.89
CRNKL1-202ENST00000377340 LRCH2Q5VUJ6 765 aa9.5□□□□□ -0.89
CRNKL1-202ENST00000377340 MNS1Q8NEH6 495 aa9.5□□□□□ -0.89
CRNKL1-202ENST00000377340 STAG1Q8WVM7 1258 aa9.5□□□□□ -0.89
CRNKL1-202ENST00000377340 RNF26Q9BY78 433 aaPredicted RBP9.5□□□□□ -0.89
CRNKL1-202ENST00000377340 SFPQP23246 707 aaKnown RBP eCLIP9.5□□□□□ -0.89
CRNKL1-202ENST00000377340 MARK3P27448 753 aa9.5□□□□□ -0.89
CRNKL1-202ENST00000377340 CCDC173Q0VFZ6 552 aa9.5□□□□□ -0.89
CRNKL1-202ENST00000377340 EEF2KMTQ96G04 330 aa9.5□□□□□ -0.89
CRNKL1-202ENST00000377340 MYO9BQ13459 2157 aa9.49□□□□□ -0.89
CRNKL1-202ENST00000377340 LIFRP42702 1097 aa9.49□□□□□ -0.89
CRNKL1-202ENST00000377340 FAM102BQ5T8I3 360 aa9.49□□□□□ -0.89
CRNKL1-202ENST00000377340 USP37Q86T82 979 aa9.49□□□□□ -0.89
CRNKL1-202ENST00000377340 ZNF280CQ8ND82 737 aa9.49□□□□□ -0.89
CRNKL1-202ENST00000377340 CLIC6Q96NY7 704 aa9.49□□□□□ -0.89
CRNKL1-202ENST00000377340 ZNF577Q9BSK1 485 aa9.49□□□□□ -0.89
CRNKL1-202ENST00000377340 A0A087WWV3 80 aa9.49□□□□□ -0.89
CRNKL1-202ENST00000377340 ENTPD3O75355 529 aa9.49□□□□□ -0.89
CRNKL1-202ENST00000377340 STRN3Q13033 797 aa9.49□□□□□ -0.89
CRNKL1-202ENST00000377340 ANKRD13AQ8IZ07 590 aa9.49□□□□□ -0.89
CRNKL1-202ENST00000377340 AOPEPQ8N6M6 819 aa9.49□□□□□ -0.89
CRNKL1-202ENST00000377340 NEDD1Q8NHV4 660 aa9.49□□□□□ -0.89
CRNKL1-202ENST00000377340 FNBP1Q96RU3 617 aa9.49□□□□□ -0.89
CRNKL1-202ENST00000377340 BAZ2BQ9UIF8 2168 aaKnown RBP9.49□□□□□ -0.89
CRNKL1-202ENST00000377340 GPR75-ASB3A0A0A6YYF3 556 aa9.49□□□□□ -0.89
CRNKL1-202ENST00000377340 NEBLO76041 1014 aa9.49□□□□□ -0.89
CRNKL1-202ENST00000377340 ARHGAP29Q52LW3 1261 aa9.49□□□□□ -0.89
CRNKL1-202ENST00000377340 RCSD1Q6JBY9 416 aa9.49□□□□□ -0.89
CRNKL1-202ENST00000377340 GPIHBP1Q8IV16 184 aa9.49□□□□□ -0.89
CRNKL1-202ENST00000377340 LEO1Q8WVC0 666 aaPredicted RBP9.49□□□□□ -0.89
CRNKL1-202ENST00000377340 DNAI2Q9GZS0 605 aa9.49□□□□□ -0.89
CRNKL1-202ENST00000377340 KIF1AQ12756 1690 aa9.49□□□□□ -0.89
CRNKL1-202ENST00000377340 PHLPP1O60346 1717 aa9.49□□□□□ -0.89
CRNKL1-202ENST00000377340 SPDYE2BA6NHP3 402 aa9.49□□□□□ -0.89
CRNKL1-202ENST00000377340 ADM5C9JUS6 153 aa9.49□□□□□ -0.89
CRNKL1-202ENST00000377340 SPDYE6P0CI01 402 aa9.49□□□□□ -0.89
CRNKL1-202ENST00000377340 IFNAR1P17181 557 aa9.49□□□□□ -0.89
CRNKL1-202ENST00000377340 HOXA10P31260 410 aaPredicted RBP9.49□□□□□ -0.89
CRNKL1-202ENST00000377340 FASTKD5Q7L8L6 764 aaKnown RBP9.49□□□□□ -0.89
CRNKL1-202ENST00000377340 TMC6Q7Z403 805 aa9.49□□□□□ -0.89
CRNKL1-202ENST00000377340 VPS36Q86VN1 386 aa9.49□□□□□ -0.89
CRNKL1-202ENST00000377340 STAG2Q8N3U4 1231 aa9.49□□□□□ -0.89
CRNKL1-202ENST00000377340 NSUN7Q8NE18 718 aaKnown RBP9.49□□□□□ -0.89
CRNKL1-202ENST00000377340 TRERF1Q96PN7 1200 aa9.49□□□□□ -0.89
CRNKL1-202ENST00000377340 BRPF3Q9ULD4 1205 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms