RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 ARHGAP6O43182 974 aa19.84■□□□□ 0.77
CLSTN1-202ENST00000377298 KIF22Q14807 665 aa19.84■□□□□ 0.77
CLSTN1-202ENST00000377298 CDHR2Q9BYE9 1310 aa19.83■□□□□ 0.77
CLSTN1-202ENST00000377298 PRKAB2O43741 272 aa19.83■□□□□ 0.77
CLSTN1-202ENST00000377298 TRERF1Q96PN7 1200 aa19.83■□□□□ 0.77
CLSTN1-202ENST00000377298 NAPGQ99747 312 aaPredicted RBP19.83■□□□□ 0.77
CLSTN1-202ENST00000377298 COL15A1P39059 1388 aa19.83■□□□□ 0.77
CLSTN1-202ENST00000377298 GTPBP6O43824 516 aaPredicted RBP19.83■□□□□ 0.76
CLSTN1-202ENST00000377298 PTGDRQ13258 359 aa19.83■□□□□ 0.76
CLSTN1-202ENST00000377298 NCAPG2Q86XI2 1143 aa19.83■□□□□ 0.76
CLSTN1-202ENST00000377298 DNAJC5Q9H3Z4 198 aa19.83■□□□□ 0.76
CLSTN1-202ENST00000377298 LARSQ9P2J5 1176 aaKnown RBP19.83■□□□□ 0.76
CLSTN1-202ENST00000377298 SETBP1Q9Y6X0 1596 aa19.83■□□□□ 0.76
CLSTN1-202ENST00000377298 ZBTB8OSQ8IWT0 167 aa19.83■□□□□ 0.76
CLSTN1-202ENST00000377298 TRMT44Q8IYL2 757 aaKnown RBP19.83■□□□□ 0.76
CLSTN1-202ENST00000377298 MAGEF1Q9HAY2 307 aa19.83■□□□□ 0.76
CLSTN1-202ENST00000377298 PCDHA7Q9UN72 937 aa19.83■□□□□ 0.76
CLSTN1-202ENST00000377298 FERP16591 822 aa19.82■□□□□ 0.76
CLSTN1-202ENST00000377298 MECOMQ03112 1051 aa19.82■□□□□ 0.76
CLSTN1-202ENST00000377298 KLHL30Q0D2K2 578 aa19.82■□□□□ 0.76
CLSTN1-202ENST00000377298 XKR9Q5GH70 373 aa19.82■□□□□ 0.76
CLSTN1-202ENST00000377298 CRB1P82279 1406 aa19.82■□□□□ 0.76
CLSTN1-202ENST00000377298 RAD17O75943 681 aa19.82■□□□□ 0.76
CLSTN1-202ENST00000377298 CYP19A1P11511 503 aaPredicted RBP19.82■□□□□ 0.76
CLSTN1-202ENST00000377298 MAGEA1P43355 309 aa19.82■□□□□ 0.76
CLSTN1-202ENST00000377298 KRBA2Q6ZNG9 492 aa19.82■□□□□ 0.76
CLSTN1-202ENST00000377298 DHX37Q8IY37 1157 aaKnown RBP19.82■□□□□ 0.76
CLSTN1-202ENST00000377298 PCDHA4Q9UN74 947 aa19.82■□□□□ 0.76
CLSTN1-202ENST00000377298 COL4A3BPQ9Y5P4 624 aa19.82■□□□□ 0.76
CLSTN1-202ENST00000377298 PIH1D3Q9NQM4 214 aaKnown RBP19.82■□□□□ 0.76
CLSTN1-202ENST00000377298 RTEL1Q9NZ71 1219 aa19.82■□□□□ 0.76
CLSTN1-202ENST00000377298 FAM102BQ5T8I3 360 aa19.82■□□□□ 0.76
CLSTN1-202ENST00000377298 OTUD6BQ8N6M0 293 aa19.82■□□□□ 0.76
CLSTN1-202ENST00000377298 UBL4BQ8N7F7 174 aa19.82■□□□□ 0.76
CLSTN1-202ENST00000377298 TMEM63CQ9P1W3 806 aa19.82■□□□□ 0.76
CLSTN1-202ENST00000377298 TRPC6Q9Y210 931 aa19.82■□□□□ 0.76
CLSTN1-202ENST00000377298 CCNA1P78396 465 aa19.81■□□□□ 0.76
CLSTN1-202ENST00000377298 CCDC114Q96M63 670 aa19.81■□□□□ 0.76
CLSTN1-202ENST00000377298 A0A1W2PQ27 194 aa19.81■□□□□ 0.76
CLSTN1-202ENST00000377298 A0A1W2PQ64 194 aa19.81■□□□□ 0.76
CLSTN1-202ENST00000377298 A0A1W2PQD8 194 aa19.81■□□□□ 0.76
CLSTN1-202ENST00000377298 SLC27A3Q5K4L6 730 aa19.81■□□□□ 0.76
CLSTN1-202ENST00000377298 SFMBT2Q5VUG0 894 aa19.81■□□□□ 0.76
CLSTN1-202ENST00000377298 CIAPIN1Q6FI81 312 aa19.81■□□□□ 0.76
CLSTN1-202ENST00000377298 AGTPBP1Q9UPW5 1226 aa19.81■□□□□ 0.76
CLSTN1-202ENST00000377298 PNPLA6Q8IY17 1366 aa19.81■□□□□ 0.76
CLSTN1-202ENST00000377298 YWHAEP62258 255 aaKnown RBP19.81■□□□□ 0.76
CLSTN1-202ENST00000377298 NSUN7Q8NE18 718 aaKnown RBP19.81■□□□□ 0.76
CLSTN1-202ENST00000377298 PI4K2BQ8TCG2 481 aa19.81■□□□□ 0.76
CLSTN1-202ENST00000377298 NR1I2O75469 434 aa19.81■□□□□ 0.76
CLSTN1-202ENST00000377298 XRCC5P13010 732 aaKnown RBP19.81■□□□□ 0.76
CLSTN1-202ENST00000377298 TNNI1P19237 187 aa19.81■□□□□ 0.76
CLSTN1-202ENST00000377298 SECISBP2LQ93073 1101 aaKnown RBP19.81■□□□□ 0.76
CLSTN1-202ENST00000377298 P4HA1P13674 534 aa19.8■□□□□ 0.76
CLSTN1-202ENST00000377298 FOXP4Q8IVH2 680 aaPredicted RBP19.8■□□□□ 0.76
CLSTN1-202ENST00000377298 KIAA1524Q8TCG1 905 aa19.8■□□□□ 0.76
CLSTN1-202ENST00000377298 NSRP1Q9H0G5 558 aaKnown RBP19.8■□□□□ 0.76
CLSTN1-202ENST00000377298 SH2B2O14492 632 aaPredicted RBP19.8■□□□□ 0.76
CLSTN1-202ENST00000377298 MRPS9P82933 396 aaKnown RBP19.8■□□□□ 0.76
CLSTN1-202ENST00000377298 KCTD2Q14681 263 aa19.8■□□□□ 0.76
CLSTN1-202ENST00000377298 DIXDC1Q155Q3 683 aa19.8■□□□□ 0.76
CLSTN1-202ENST00000377298 IFT81Q8WYA0 676 aa19.8■□□□□ 0.76
CLSTN1-202ENST00000377298 PLCD4Q9BRC7 762 aa19.8■□□□□ 0.76
CLSTN1-202ENST00000377298 CDC42BPBQ9Y5S2 1711 aa19.8■□□□□ 0.76
CLSTN1-202ENST00000377298 KRT19P08727 400 aa19.8■□□□□ 0.76
CLSTN1-202ENST00000377298 BMP3P12645 472 aa19.8■□□□□ 0.76
CLSTN1-202ENST00000377298 CCDC14Q49A88 953 aa19.8■□□□□ 0.76
CLSTN1-202ENST00000377298 SPICE1Q8N0Z3 855 aa19.8■□□□□ 0.76
CLSTN1-202ENST00000377298 CUEDC2Q9H467 287 aa19.8■□□□□ 0.76
CLSTN1-202ENST00000377298 TXNDC16Q9P2K2 825 aa19.8■□□□□ 0.76
CLSTN1-202ENST00000377298 CARMIL3Q8ND23 1372 aa19.8■□□□□ 0.76
CLSTN1-202ENST00000377298 GCFC2P16383 781 aaKnown RBP19.8■□□□□ 0.76
CLSTN1-202ENST00000377298 LIFRP42702 1097 aa19.8■□□□□ 0.76
CLSTN1-202ENST00000377298 RBM6P78332 1123 aaKnown RBP19.8■□□□□ 0.76
CLSTN1-202ENST00000377298 FAM178BQ8IXR5 827 aa19.8■□□□□ 0.76
CLSTN1-202ENST00000377298 CCDC51Q96ER9 411 aa19.8■□□□□ 0.76
CLSTN1-202ENST00000377298 PANK4Q9NVE7 773 aa19.8■□□□□ 0.76
CLSTN1-202ENST00000377298 CTTNBP2NLQ9P2B4 639 aa19.8■□□□□ 0.76
CLSTN1-202ENST00000377298 MADDQ8WXG6 1647 aa19.8■□□□□ 0.76
CLSTN1-202ENST00000377298 CD19P15391 556 aa19.79■□□□□ 0.76
CLSTN1-202ENST00000377298 SLC39A14Q15043 492 aa19.79■□□□□ 0.76
CLSTN1-202ENST00000377298 NRBP2Q9NSY0 501 aa19.79■□□□□ 0.76
CLSTN1-202ENST00000377298 CROCC2H7BZ55 1655 aa19.79■□□□□ 0.76
CLSTN1-202ENST00000377298 PRPF6O94906 941 aaKnown RBP19.79■□□□□ 0.76
CLSTN1-202ENST00000377298 RHOXF2BP0C7M4 288 aa19.79■□□□□ 0.76
CLSTN1-202ENST00000377298 IFNAR1P17181 557 aa19.79■□□□□ 0.76
CLSTN1-202ENST00000377298 RHOXF2Q9BQY4 288 aa19.79■□□□□ 0.76
CLSTN1-202ENST00000377298 ATF5Q9Y2D1 282 aaPredicted RBP19.79■□□□□ 0.76
CLSTN1-202ENST00000377298 C1orf167Q5SNV9 1468 aa19.79■□□□□ 0.76
CLSTN1-202ENST00000377298 EPHA10Q5JZY3 1008 aa19.79■□□□□ 0.76
CLSTN1-202ENST00000377298 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.79■□□□□ 0.762e-6■■■□□ 15.7
CLSTN1-202ENST00000377298 V9GYY5 206 aaPredicted RBP19.79■□□□□ 0.76
CLSTN1-202ENST00000377298 PPP6R2O75170 966 aa19.79■□□□□ 0.76
CLSTN1-202ENST00000377298 USP17L8P0C7I0 530 aa19.79■□□□□ 0.76
CLSTN1-202ENST00000377298 METTL13Q8N6R0 699 aa19.79■□□□□ 0.76
CLSTN1-202ENST00000377298 BRIP1Q9BX63 1249 aa19.79■□□□□ 0.76
CLSTN1-202ENST00000377298 PLEKHG2Q9H7P9 1386 aa19.78■□□□□ 0.76
CLSTN1-202ENST00000377298 GDF11O95390 407 aa19.78■□□□□ 0.76
CLSTN1-202ENST00000377298 MCAMP43121 646 aa19.78■□□□□ 0.76
CLSTN1-202ENST00000377298 AK8Q96MA6 479 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms