RNA–Protein interactions for RNA: ENST00000377294.2

ZKSCAN4-201, Transcript of zinc finger with KRAB and SCAN domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN4, Length 2,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN4-201ENST00000377294 TFRCP02786 760 aaKnown RBP16.42■□□□□ 0.22
ZKSCAN4-201ENST00000377294 RPN1P04843 607 aaKnown RBP16.42■□□□□ 0.22
ZKSCAN4-201ENST00000377294 GYPCP04921 128 aa16.42■□□□□ 0.22
ZKSCAN4-201ENST00000377294 PBX1P40424 430 aa16.42■□□□□ 0.22
ZKSCAN4-201ENST00000377294 STAT6P42226 847 aa16.42■□□□□ 0.22
ZKSCAN4-201ENST00000377294 PRCPP42785 496 aa16.42■□□□□ 0.22
ZKSCAN4-201ENST00000377294 DGKHQ86XP1 1220 aa16.42■□□□□ 0.22
ZKSCAN4-201ENST00000377294 RASSF8Q8NHQ8 419 aa16.42■□□□□ 0.22
ZKSCAN4-201ENST00000377294 SNED1Q8TER0 1413 aa16.41■□□□□ 0.22
ZKSCAN4-201ENST00000377294 CDK5RAP2Q96SN8 1893 aa16.41■□□□□ 0.22
ZKSCAN4-201ENST00000377294 DDX60LQ5H9U9 1706 aaKnown RBP16.41■□□□□ 0.22
ZKSCAN4-201ENST00000377294 SLURP2P0DP57 97 aa16.41■□□□□ 0.22
ZKSCAN4-201ENST00000377294 OGFRQ9NZT2 677 aa16.41■□□□□ 0.22
ZKSCAN4-201ENST00000377294 ZHX1Q9UKY1 873 aaPredicted RBP16.41■□□□□ 0.22
ZKSCAN4-201ENST00000377294 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.41■□□□□ 0.22
ZKSCAN4-201ENST00000377294 GTPBP6O43824 516 aaPredicted RBP16.41■□□□□ 0.22
ZKSCAN4-201ENST00000377294 DHX8Q14562 1220 aaKnown RBP16.41■□□□□ 0.22
ZKSCAN4-201ENST00000377294 ZNF804AQ7Z570 1209 aa16.41■□□□□ 0.22
ZKSCAN4-201ENST00000377294 ACRBPQ8NEB7 543 aa16.41■□□□□ 0.22
ZKSCAN4-201ENST00000377294 KIFC2Q96AC6 838 aa16.41■□□□□ 0.22
ZKSCAN4-201ENST00000377294 CD209Q9NNX6 404 aa16.41■□□□□ 0.22
ZKSCAN4-201ENST00000377294 MORC2Q9Y6X9 1032 aaPredicted RBP16.41■□□□□ 0.22
ZKSCAN4-201ENST00000377294 UBAP1LF5GYI3 381 aa16.4■□□□□ 0.22
ZKSCAN4-201ENST00000377294 CCP110O43303 1012 aa16.4■□□□□ 0.22
ZKSCAN4-201ENST00000377294 CDK8P49336 464 aa16.4■□□□□ 0.22
ZKSCAN4-201ENST00000377294 CLCN6P51797 869 aa16.4■□□□□ 0.22
ZKSCAN4-201ENST00000377294 EIF6P56537 245 aaKnown RBP16.4■□□□□ 0.22
ZKSCAN4-201ENST00000377294 PPFIBP1Q86W92 1011 aa16.4■□□□□ 0.22
ZKSCAN4-201ENST00000377294 TEX11Q8IYF3 940 aa16.4■□□□□ 0.22
ZKSCAN4-201ENST00000377294 RPGRQ92834 1020 aaKnown RBP16.4■□□□□ 0.22
ZKSCAN4-201ENST00000377294 CCDC34Q96HJ3 373 aa16.4■□□□□ 0.22
ZKSCAN4-201ENST00000377294 EYA3Q99504 573 aa16.4■□□□□ 0.22
ZKSCAN4-201ENST00000377294 UBA5Q9GZZ9 404 aa16.4■□□□□ 0.22
ZKSCAN4-201ENST00000377294 ZSWIM4Q9H7M6 989 aa16.4■□□□□ 0.22
ZKSCAN4-201ENST00000377294 DISC1Q9NRI5 854 aa16.4■□□□□ 0.22
ZKSCAN4-201ENST00000377294 NHSQ6T4R5 1651 aa16.4■□□□□ 0.22
ZKSCAN4-201ENST00000377294 KLRF2D3W0D1 207 aa16.4■□□□□ 0.22
ZKSCAN4-201ENST00000377294 MFAP3LO75121 409 aa16.4■□□□□ 0.22
ZKSCAN4-201ENST00000377294 BAG3O95817 575 aa16.4■□□□□ 0.22
ZKSCAN4-201ENST00000377294 CALML3P27482 149 aa16.4■□□□□ 0.22
ZKSCAN4-201ENST00000377294 CASQ1P31415 396 aa16.4■□□□□ 0.22
ZKSCAN4-201ENST00000377294 TRAPPC10P48553 1259 aa16.4■□□□□ 0.22
ZKSCAN4-201ENST00000377294 PAK1Q13153 545 aa16.4■□□□□ 0.22
ZKSCAN4-201ENST00000377294 FCHSD1Q86WN1 690 aa16.4■□□□□ 0.22
ZKSCAN4-201ENST00000377294 ZBTB9Q96C00 473 aa16.4■□□□□ 0.22
ZKSCAN4-201ENST00000377294 LEMD3Q9Y2U8 911 aa16.4■□□□□ 0.22
ZKSCAN4-201ENST00000377294 FRMPD2Q68DX3 1309 aaPredicted RBP16.39■□□□□ 0.21
ZKSCAN4-201ENST00000377294 F8W031 263 aaPredicted RBP16.39■□□□□ 0.21
ZKSCAN4-201ENST00000377294 N4BP3O15049 544 aa16.39■□□□□ 0.21
ZKSCAN4-201ENST00000377294 TOM1O60784 492 aa16.39■□□□□ 0.21
ZKSCAN4-201ENST00000377294 MNS1Q8NEH6 495 aa16.39■□□□□ 0.21
ZKSCAN4-201ENST00000377294 FEZ1Q99689 392 aa16.39■□□□□ 0.21
ZKSCAN4-201ENST00000377294 BARHL2Q9NY43 387 aa16.39■□□□□ 0.21
ZKSCAN4-201ENST00000377294 ROBO3Q96MS0 1386 aa16.39■□□□□ 0.21
ZKSCAN4-201ENST00000377294 FLT1P17948 1338 aa16.39■□□□□ 0.21
ZKSCAN4-201ENST00000377294 PALM3A6NDB9 673 aaPredicted RBP16.38■□□□□ 0.21
ZKSCAN4-201ENST00000377294 TADA3O75528 432 aa16.38■□□□□ 0.21
ZKSCAN4-201ENST00000377294 SEC31AO94979 1220 aaKnown RBP16.38■□□□□ 0.21
ZKSCAN4-201ENST00000377294 H2AFXP16104 143 aaPredicted RBP16.38■□□□□ 0.21
ZKSCAN4-201ENST00000377294 PICALMQ13492 652 aa16.38■□□□□ 0.21
ZKSCAN4-201ENST00000377294 LETM2Q2VYF4 491 aa16.38■□□□□ 0.21
ZKSCAN4-201ENST00000377294 DTHD1Q6ZMT9 781 aa16.38■□□□□ 0.21
ZKSCAN4-201ENST00000377294 CEP95Q96GE4 821 aa16.38■□□□□ 0.21
ZKSCAN4-201ENST00000377294 NOL10Q9BSC4 688 aaKnown RBP16.38■□□□□ 0.21
ZKSCAN4-201ENST00000377294 MXD3Q9BW11 206 aa16.38■□□□□ 0.21
ZKSCAN4-201ENST00000377294 TMEM260Q9NX78 707 aa16.38■□□□□ 0.21
ZKSCAN4-201ENST00000377294 POLLQ9UGP5 575 aa16.38■□□□□ 0.21
ZKSCAN4-201ENST00000377294 KCNJ18B7U540 433 aa16.38■□□□□ 0.21
ZKSCAN4-201ENST00000377294 NKRFO15226 690 aaKnown RBP eCLIP16.38■□□□□ 0.21
ZKSCAN4-201ENST00000377294 LONP1P36776 959 aaKnown RBP16.38■□□□□ 0.21
ZKSCAN4-201ENST00000377294 COPB1P53618 953 aaKnown RBP16.38■□□□□ 0.21
ZKSCAN4-201ENST00000377294 NAPAP54920 295 aa16.38■□□□□ 0.21
ZKSCAN4-201ENST00000377294 ERVK-24P63145 666 aa16.38■□□□□ 0.21
ZKSCAN4-201ENST00000377294 KCNJ12Q14500 433 aa16.38■□□□□ 0.21
ZKSCAN4-201ENST00000377294 MFSD14BQ5SR56 506 aa16.38■□□□□ 0.21
ZKSCAN4-201ENST00000377294 ZNF658Q5TYW1 1059 aaPredicted RBP16.38■□□□□ 0.21
ZKSCAN4-201ENST00000377294 CCDC12Q8WUD4 166 aaPredicted RBP16.38■□□□□ 0.21
ZKSCAN4-201ENST00000377294 HPS3Q969F9 1004 aa16.38■□□□□ 0.21
ZKSCAN4-201ENST00000377294 ADGRG1Q9Y653 693 aa16.38■□□□□ 0.21
ZKSCAN4-201ENST00000377294 USP17L5A8MUK1 530 aa16.37■□□□□ 0.21
ZKSCAN4-201ENST00000377294 RIMBP2O15034 1052 aa16.37■□□□□ 0.21
ZKSCAN4-201ENST00000377294 TCP11X2Q5H9J9 407 aa16.37■□□□□ 0.21
ZKSCAN4-201ENST00000377294 IRF2BP1Q8IU81 584 aa16.37■□□□□ 0.21
ZKSCAN4-201ENST00000377294 PIGSQ96S52 555 aa16.37■□□□□ 0.21
ZKSCAN4-201ENST00000377294 RWDD2AQ9UIY3 292 aa16.37■□□□□ 0.21
ZKSCAN4-201ENST00000377294 PES1O00541 588 aaKnown RBP16.37■□□□□ 0.21
ZKSCAN4-201ENST00000377294 CCNT1O60563 726 aaKnown RBP16.37■□□□□ 0.21
ZKSCAN4-201ENST00000377294 DMTNQ08495 405 aa16.37■□□□□ 0.21
ZKSCAN4-201ENST00000377294 JAKMIP3Q5VZ66 844 aa16.37■□□□□ 0.21
ZKSCAN4-201ENST00000377294 AMOTL1Q8IY63 956 aa16.37■□□□□ 0.21
ZKSCAN4-201ENST00000377294 FNBP4Q8N3X1 1017 aaPredicted RBP16.37■□□□□ 0.21
ZKSCAN4-201ENST00000377294 UBXN4Q92575 508 aa16.37■□□□□ 0.21
ZKSCAN4-201ENST00000377294 ANKS1AQ92625 1134 aa16.37■□□□□ 0.21
ZKSCAN4-201ENST00000377294 PANX2Q96RD6 677 aa16.37■□□□□ 0.21
ZKSCAN4-201ENST00000377294 BIN2Q9UBW5 565 aaPredicted RBP16.37■□□□□ 0.21
ZKSCAN4-201ENST00000377294 TFR2Q9UP52 801 aa16.37■□□□□ 0.21
ZKSCAN4-201ENST00000377294 LY75O60449 1722 aa16.36■□□□□ 0.21
ZKSCAN4-201ENST00000377294 KLRC4O43908 158 aa16.36■□□□□ 0.21
ZKSCAN4-201ENST00000377294 RHBDL3P58872 404 aa16.36■□□□□ 0.21
ZKSCAN4-201ENST00000377294 PPP4CP60510 307 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms